RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 CMTR1Q8N1G2 835 aaKnown RBP14.27□□□□□ -0.13
CPSF3-204ENST00000489403 YME1L1Q96TA2 773 aa14.27□□□□□ -0.13
CPSF3-204ENST00000489403 C1QTNF1Q9BXJ1 281 aa14.27□□□□□ -0.13
CPSF3-204ENST00000489403 KAT6AQ92794 2004 aa14.27□□□□□ -0.13
CPSF3-204ENST00000489403 RALGAPA2Q2PPJ7 1873 aa14.27□□□□□ -0.13
CPSF3-204ENST00000489403 NRCAMQ92823 1304 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.26□□□□□ -0.13
CPSF3-204ENST00000489403 CCDC69A6NI79 296 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 ATP9AO75110 1047 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 UPP2O95045 317 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 TCF7P36402 384 aaPredicted RBP14.26□□□□□ -0.13
CPSF3-204ENST00000489403 GNAQP50148 359 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 EPC2Q52LR7 807 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 NFXL1Q6ZNB6 911 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 APBB2Q92870 758 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 KHSRPQ92945 711 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPSF3-204ENST00000489403 GPRASP2Q96D09 838 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 TMEM87BQ96K49 555 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 SAMD11Q96NU1 681 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 LZTS2Q9BRK4 669 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 IFIH1Q9BYX4 1025 aaKnown RBP14.26□□□□□ -0.13
CPSF3-204ENST00000489403 LSG1Q9H089 658 aaKnown RBP14.26□□□□□ -0.13
CPSF3-204ENST00000489403 EPHX3Q9H6B9 360 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 NCOR1O75376 2440 aa14.26□□□□□ -0.13
CPSF3-204ENST00000489403 ATG2AQ2TAZ0 1938 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 hCG_1642624A0A1W2PR95 340 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 SLC27A2O14975 620 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 ITGB5P18084 799 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 MCM5P33992 734 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 LIFRP42702 1097 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 MGAT3Q09327 533 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 UBE2SQ16763 222 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 RUFY4Q6ZNE9 571 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 RAB11FIP4Q86YS3 637 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 TMTC2Q8N394 836 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 GIMAP8Q8ND71 665 aaPredicted RBP14.25□□□□□ -0.13
CPSF3-204ENST00000489403 MRPL38Q96DV4 380 aaKnown RBP14.25□□□□□ -0.13
CPSF3-204ENST00000489403 PSTPIP2Q9H939 334 aa14.25□□□□□ -0.13
CPSF3-204ENST00000489403 GSTTP1A0A1W2PQM5 241 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 H3BNC9 293 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 CHRNA1P02708 482 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 CALM1P0DP23 149 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 CALM2P0DP24 149 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 CALM3P0DP25 149 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 GHRP10912 638 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 KCNA5P22460 613 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 MARK3P27448 753 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 LEXMQ3ZCV2 418 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 RPAINQ86UA6 219 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.24□□□□□ -0.13
CPSF3-204ENST00000489403 SEPT1Q8WYJ6 367 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 CDHR1Q96JP9 859 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 LRRC2Q9BYS8 371 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 CD320Q9NPF0 282 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 UBIAD1Q9Y5Z9 338 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 BRWD1Q9NSI6 2320 aa14.24□□□□□ -0.13
CPSF3-204ENST00000489403 PPFIA1Q13136 1202 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 GPM6BQ13491 265 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 MTMR1Q13613 665 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 NECTIN1Q15223 517 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 GRIK4Q16099 956 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 PTPROQ16827 1216 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 CREB3L3Q68CJ9 461 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 TAF2Q6P1X5 1199 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 TMTC3Q6ZXV5 915 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 TMEM192Q8IY95 271 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 CCDC82Q8N4S0 544 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 ESYT1Q9BSJ8 1104 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 EHMT1Q9H9B1 1298 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 ERAP1Q9NZ08 941 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 PKD2L1Q9P0L9 805 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 TUBE1Q9UJT0 475 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 PCDHA6Q9UN73 950 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 PCDHA8Q9Y5H6 950 aa14.23□□□□□ -0.13
CPSF3-204ENST00000489403 MBLAC1A4D2B0 266 aaPredicted RBP14.22□□□□□ -0.13
CPSF3-204ENST00000489403 SPDYE3A6NKU9 549 aa14.22□□□□□ -0.13
CPSF3-204ENST00000489403 LINC00271P0C7V0 271 aa14.22□□□□□ -0.13
CPSF3-204ENST00000489403 IL9P15248 144 aa14.22□□□□□ -0.13
CPSF3-204ENST00000489403 LPIN1Q14693 890 aa14.22□□□□□ -0.13
CPSF3-204ENST00000489403 TIGD5Q53EQ6 642 aa14.22□□□□□ -0.13
CPSF3-204ENST00000489403 MARCH8Q5T0T0 291 aa14.22□□□□□ -0.13
CPSF3-204ENST00000489403 MICU3Q86XE3 530 aa14.22□□□□□ -0.13
CPSF3-204ENST00000489403 LRFN3Q9BTN0 628 aa14.22□□□□□ -0.13
CPSF3-204ENST00000489403 RC3H2Q9HBD1 1191 aaKnown RBP14.22□□□□□ -0.13
CPSF3-204ENST00000489403 JADE2Q9NQC1 790 aa14.22□□□□□ -0.13
CPSF3-204ENST00000489403 SLC12A7Q9Y666 1083 aa14.22□□□□□ -0.13
CPSF3-204ENST00000489403 BDP1A6H8Y1 2624 aa14.22□□□□□ -0.13
CPSF3-204ENST00000489403 ADGRA3Q8IWK6 1321 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 PLA2G5P39877 138 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 TCEAL5Q5H9L2 206 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 PTCRAQ6ISU1 281 aaPredicted RBP14.21□□□□□ -0.13
CPSF3-204ENST00000489403 HEATR3Q7Z4Q2 680 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 RSPH3Q86UC2 560 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 SGMS1Q86VZ5 419 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 FAM178BQ8IXR5 827 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 FIBCD1Q8N539 461 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 FANCBQ8NB91 859 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 BANK1Q8NDB2 785 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 NEK9Q8TD19 979 aa14.21□□□□□ -0.13
CPSF3-204ENST00000489403 DNAJB3Q8WWF6 145 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms