RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 IGLV3-22A0A075B6J6 115 aa24.12■■□□□ 1.45
LIME1-207ENST00000489212 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.12■■□□□ 1.45
LIME1-207ENST00000489212 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.12■■□□□ 1.45
LIME1-207ENST00000489212 C17orf102A2RUQ5 167 aa24.12■■□□□ 1.45
LIME1-207ENST00000489212 GRXCR1A8MXD5 290 aa24.12■■□□□ 1.45
LIME1-207ENST00000489212 CKBP12277 381 aa24.12■■□□□ 1.45
LIME1-207ENST00000489212 ZNF76P36508 570 aa24.12■■□□□ 1.45
LIME1-207ENST00000489212 GPNMBQ14956 572 aa24.12■■□□□ 1.45
LIME1-207ENST00000489212 CPLX2Q6PUV4 134 aaKnown RBP24.12■■□□□ 1.45
LIME1-207ENST00000489212 NIPA1Q7RTP0 329 aa24.12■■□□□ 1.45
LIME1-207ENST00000489212 CCDC155Q8N6L0 562 aa24.12■■□□□ 1.45
LIME1-207ENST00000489212 BICD2Q8TD16 824 aa24.12■■□□□ 1.45
LIME1-207ENST00000489212 AFAP1L1Q8TED9 768 aa24.12■■□□□ 1.45
LIME1-207ENST00000489212 SLC9A2Q9UBY0 812 aa24.12■■□□□ 1.45
LIME1-207ENST00000489212 ZNF215Q9UL58 517 aaPredicted RBP24.12■■□□□ 1.45
LIME1-207ENST00000489212 NFASCO94856 1347 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 EDIL3O43854 480 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 SELPP16109 830 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 RFC2P35250 354 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 NLRP5P59047 1200 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 MCTP2Q6DN12 878 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 TRAF7Q6Q0C0 670 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 SERINC5Q86VE9 423 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 PLA2G4DQ86XP0 818 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 ATP6V0A1Q93050 837 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 PCYT2Q99447 389 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 SETD4Q9NVD3 440 aa24.11■■□□□ 1.45
LIME1-207ENST00000489212 TREHO43280 583 aa24.1■■□□□ 1.45
LIME1-207ENST00000489212 LARGE1O95461 756 aa24.1■■□□□ 1.45
LIME1-207ENST00000489212 CTDNEP1O95476 244 aa24.1■■□□□ 1.45
LIME1-207ENST00000489212 PFKMP08237 780 aa24.1■■□□□ 1.45
LIME1-207ENST00000489212 ANKRD1Q15327 319 aa24.1■■□□□ 1.45
LIME1-207ENST00000489212 NPY5RQ15761 445 aa24.1■■□□□ 1.45
LIME1-207ENST00000489212 LRRC8DQ7L1W4 858 aa24.1■■□□□ 1.45
LIME1-207ENST00000489212 FAM161BQ96MY7 647 aa24.1■■□□□ 1.45
LIME1-207ENST00000489212 UIMC1Q96RL1 719 aa24.1■■□□□ 1.45
LIME1-207ENST00000489212 SDF4Q9BRK5 362 aa24.1■■□□□ 1.45
LIME1-207ENST00000489212 NEK4P51957 841 aa24.09■■□□□ 1.45
LIME1-207ENST00000489212 ACTR2P61160 394 aa24.09■■□□□ 1.45
LIME1-207ENST00000489212 ME3Q16798 604 aa24.09■■□□□ 1.45
LIME1-207ENST00000489212 ZNF618Q5T7W0 954 aa24.09■■□□□ 1.45
LIME1-207ENST00000489212 ZNF697Q5TEC3 545 aa24.09■■□□□ 1.45
LIME1-207ENST00000489212 TTYH1Q9H313 450 aaPredicted RBP24.09■■□□□ 1.45
LIME1-207ENST00000489212 PCDHA4Q9UN74 947 aa24.09■■□□□ 1.45
LIME1-207ENST00000489212 KAT6AQ92794 2004 aa24.09■■□□□ 1.45
LIME1-207ENST00000489212 DHX15O43143 795 aaKnown RBP24.08■■□□□ 1.45
LIME1-207ENST00000489212 NBNO60934 754 aa24.08■■□□□ 1.45
LIME1-207ENST00000489212 LGR5O75473 907 aa24.08■■□□□ 1.45
LIME1-207ENST00000489212 MARK3P27448 753 aa24.08■■□□□ 1.45
LIME1-207ENST00000489212 CIITAP33076 1130 aa24.08■■□□□ 1.45
LIME1-207ENST00000489212 PBX2P40425 430 aa24.08■■□□□ 1.45
LIME1-207ENST00000489212 ADAM17P78536 824 aa24.08■■□□□ 1.45
LIME1-207ENST00000489212 NECAB1Q8N987 351 aa24.08■■□□□ 1.45
LIME1-207ENST00000489212 LMBR1Q8WVP7 490 aa24.08■■□□□ 1.45
LIME1-207ENST00000489212 GUCD1Q96NT3 240 aa24.08■■□□□ 1.45
LIME1-207ENST00000489212 PBX4Q9BYU1 374 aa24.08■■□□□ 1.45
LIME1-207ENST00000489212 MTIF3Q9H2K0 278 aaKnown RBP24.08■■□□□ 1.45
LIME1-207ENST00000489212 EMSYQ7Z589 1322 aa24.08■■□□□ 1.44
LIME1-207ENST00000489212 CHD9Q3L8U1 2897 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 M0R2N6 131 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 DDX39AO00148 427 aaKnown RBP24.07■■□□□ 1.44
LIME1-207ENST00000489212 CDKL5O76039 1030 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 CCNE2O96020 404 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 DNAJB2P25686 324 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 MBTPS1Q14703 1052 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 GLG1Q92896 1179 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 LENG9Q96B70 501 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 FTOQ9C0B1 505 aaKnown RBP eCLIP24.07■■□□□ 1.44
LIME1-207ENST00000489212 SEMA6BQ9H3T3 888 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 SMARCAD1Q9H4L7 1026 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 ERAP1Q9NZ08 941 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 STK36Q9NRP7 1315 aa24.07■■□□□ 1.44
LIME1-207ENST00000489212 ZBBXA8MT70 800 aa24.06■■□□□ 1.44
LIME1-207ENST00000489212 ATG7O95352 703 aa24.06■■□□□ 1.44
LIME1-207ENST00000489212 CXCL10P02778 98 aa24.06■■□□□ 1.44
LIME1-207ENST00000489212 THPOP40225 353 aa24.06■■□□□ 1.44
LIME1-207ENST00000489212 BLIDQ8IZY5 108 aa24.06■■□□□ 1.44
LIME1-207ENST00000489212 DAGLBQ8NCG7 672 aa24.06■■□□□ 1.44
LIME1-207ENST00000489212 KCNJ14Q9UNX9 436 aa24.06■■□□□ 1.44
LIME1-207ENST00000489212 SLC4A7Q9Y6M7 1214 aa24.06■■□□□ 1.44
LIME1-207ENST00000489212 GBF1Q92538 1859 aa24.06■■□□□ 1.44
LIME1-207ENST00000489212 IPO5O00410 1097 aaKnown RBP24.05■■□□□ 1.44
LIME1-207ENST00000489212 GNAT1P11488 350 aa24.05■■□□□ 1.44
LIME1-207ENST00000489212 TCTN1Q2MV58 587 aa24.05■■□□□ 1.44
LIME1-207ENST00000489212 PRR16Q569H4 304 aa24.05■■□□□ 1.44
LIME1-207ENST00000489212 GTF3C6Q969F1 213 aa24.05■■□□□ 1.44
LIME1-207ENST00000489212 GJB4Q9NTQ9 266 aa24.05■■□□□ 1.44
LIME1-207ENST00000489212 NRCAMQ92823 1304 aa24.05■■□□□ 1.44
LIME1-207ENST00000489212 ACTN1P12814 892 aa24.04■■□□□ 1.44
LIME1-207ENST00000489212 FDPSP14324 419 aaKnown RBP24.04■■□□□ 1.44
LIME1-207ENST00000489212 SETQ01105 290 aaPredicted RBP24.04■■□□□ 1.44
LIME1-207ENST00000489212 PPFIA1Q13136 1202 aa24.04■■□□□ 1.44
LIME1-207ENST00000489212 FAM177A1Q8N128 213 aaPredicted RBP24.04■■□□□ 1.44
LIME1-207ENST00000489212 TBCKQ8TEA7 893 aa24.04■■□□□ 1.44
LIME1-207ENST00000489212 TIFAQ96CG3 184 aa24.04■■□□□ 1.44
LIME1-207ENST00000489212 ZNF577Q9BSK1 485 aa24.04■■□□□ 1.44
LIME1-207ENST00000489212 PHF20Q9BVI0 1012 aa24.04■■□□□ 1.44
LIME1-207ENST00000489212 IGKV6D-21A0A0A0MT36 114 aa24.03■■□□□ 1.44
LIME1-207ENST00000489212 PARNO95453 639 aaKnown RBP24.03■■□□□ 1.44
LIME1-207ENST00000489212 USP11P51784 963 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms