RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CDX2Q99626 313 aaPredicted RBP28.53■■■□□ 2.16
HMGN1-217ENST00000489072 FTOQ9C0B1 505 aaKnown RBP eCLIP28.53■■■□□ 2.167e-6■■□□□ 12.9
HMGN1-217ENST00000489072 C6orf50Q9HD87 102 aa28.53■■■□□ 2.16
HMGN1-217ENST00000489072 ZNF215Q9UL58 517 aaPredicted RBP28.53■■■□□ 2.16
HMGN1-217ENST00000489072 SLC4A7Q9Y6M7 1214 aa28.53■■■□□ 2.16
HMGN1-217ENST00000489072 MEIS1O00470 390 aa28.52■■■□□ 2.16
HMGN1-217ENST00000489072 TREHO43280 583 aa28.52■■■□□ 2.16
HMGN1-217ENST00000489072 STK3Q13188 491 aa28.52■■■□□ 2.16
HMGN1-217ENST00000489072 ZNF618Q5T7W0 954 aa28.52■■■□□ 2.16
HMGN1-217ENST00000489072 ATP6V0A1Q93050 837 aa28.52■■■□□ 2.16
HMGN1-217ENST00000489072 SETD4Q9NVD3 440 aa28.52■■■□□ 2.16
HMGN1-217ENST00000489072 VPS54Q9P1Q0 977 aa28.52■■■□□ 2.16
HMGN1-217ENST00000489072 NBNO60934 754 aa28.51■■■□□ 2.15
HMGN1-217ENST00000489072 REXO1Q8N1G1 1221 aaKnown RBP28.51■■■□□ 2.15
HMGN1-217ENST00000489072 AGO4Q9HCK5 861 aaKnown RBP28.51■■■□□ 2.15
HMGN1-217ENST00000489072 JPH1Q9HDC5 661 aaPredicted RBP28.51■■■□□ 2.15
HMGN1-217ENST00000489072 CHD7Q9P2D1 2997 aa28.51■■■□□ 2.15
HMGN1-217ENST00000489072 PTPRSQ13332 1948 aa28.5■■■□□ 2.15
HMGN1-217ENST00000489072 ACTN1P12814 892 aa28.5■■■□□ 2.15
HMGN1-217ENST00000489072 ITGB3BPQ13352 177 aaPredicted RBP28.5■■■□□ 2.15
HMGN1-217ENST00000489072 MBTPS1Q14703 1052 aa28.5■■■□□ 2.15
HMGN1-217ENST00000489072 RASGRP4Q8TDF6 673 aa28.5■■■□□ 2.15
HMGN1-217ENST00000489072 SLC9A2Q9UBY0 812 aa28.5■■■□□ 2.15
HMGN1-217ENST00000489072 YBX2Q9Y2T7 364 aaKnown RBP28.5■■■□□ 2.15
HMGN1-217ENST00000489072 EYSQ5T1H1 3165 aa28.5■■■□□ 2.15
HMGN1-217ENST00000489072 NFASCO94856 1347 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 FAM86B1E9PN63 330 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 CXCL10P02778 98 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 CYP3A4P08684 503 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 FAM86B2P0C5J1 330 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 GNA11P29992 359 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 RABGGTBP53611 331 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 ANAPC15P60006 121 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 ADAM17P78536 824 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 TCTN1Q2MV58 587 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 NIPA1Q7RTP0 329 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 CCDC148Q8NFR7 591 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 MYLIPQ8WY64 445 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 PCYT2Q99447 389 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 ZNF576Q9H609 170 aa28.49■■■□□ 2.15
HMGN1-217ENST00000489072 IGLV3-22A0A075B6J6 115 aa28.48■■■□□ 2.15
HMGN1-217ENST00000489072 ATP2A2P16615 1042 aaKnown RBP28.48■■■□□ 2.15
HMGN1-217ENST00000489072 ZNF76P36508 570 aa28.48■■■□□ 2.15
HMGN1-217ENST00000489072 THPOP40225 353 aa28.48■■■□□ 2.15
HMGN1-217ENST00000489072 SSRP1Q08945 709 aaKnown RBP28.48■■■□□ 2.15
HMGN1-217ENST00000489072 GRIN2CQ14957 1233 aa28.48■■■□□ 2.15
HMGN1-217ENST00000489072 RAB30Q15771 203 aa28.48■■■□□ 2.15
HMGN1-217ENST00000489072 LMBR1Q8WVP7 490 aa28.48■■■□□ 2.15
HMGN1-217ENST00000489072 MSRAQ9UJ68 235 aa28.48■■■□□ 2.15
HMGN1-217ENST00000489072 CPLX1O14810 134 aa28.47■■■□□ 2.15
HMGN1-217ENST00000489072 LGR5O75473 907 aa28.47■■■□□ 2.15
HMGN1-217ENST00000489072 PARNO95453 639 aaKnown RBP28.47■■■□□ 2.15
HMGN1-217ENST00000489072 MARK3P27448 753 aa28.47■■■□□ 2.15
HMGN1-217ENST00000489072 MCTP2Q6DN12 878 aa28.47■■■□□ 2.15
HMGN1-217ENST00000489072 TRIM22Q8IYM9 498 aa28.47■■■□□ 2.15
HMGN1-217ENST00000489072 SDF4Q9BRK5 362 aa28.47■■■□□ 2.15
HMGN1-217ENST00000489072 NKX2-4Q9H2Z4 354 aa28.47■■■□□ 2.15
HMGN1-217ENST00000489072 SH3GLB2Q9NR46 395 aa28.47■■■□□ 2.15
HMGN1-217ENST00000489072 EMSYQ7Z589 1322 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 SEC24BO95487 1268 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 GNAT1P11488 350 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 MYOGP15173 224 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 ACTR2P61160 394 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 PLA2G4DQ86XP0 818 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 BICD2Q8TD16 824 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 GLG1Q92896 1179 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 IL17RAQ96F46 866 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 SMARCAD1Q9H4L7 1026 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 ERAP1Q9NZ08 941 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 TPCN1Q9ULQ1 816 aa28.46■■■□□ 2.15
HMGN1-217ENST00000489072 NRCAMQ92823 1304 aa28.45■■■□□ 2.15
HMGN1-217ENST00000489072 BAIAP3O94812 1187 aa28.45■■■□□ 2.14
HMGN1-217ENST00000489072 SCRN1Q12765 414 aa28.45■■■□□ 2.14
HMGN1-217ENST00000489072 AIFM3Q96NN9 605 aa28.45■■■□□ 2.14
HMGN1-217ENST00000489072 RSPH10B2B2RC85 870 aa28.44■■■□□ 2.14
HMGN1-217ENST00000489072 EDIL3O43854 480 aa28.44■■■□□ 2.14
HMGN1-217ENST00000489072 DEXIO95424 95 aa28.44■■■□□ 2.14
HMGN1-217ENST00000489072 RSPH10BP0C881 870 aa28.44■■■□□ 2.14
HMGN1-217ENST00000489072 CNKSR3Q6P9H4 555 aa28.44■■■□□ 2.14
HMGN1-217ENST00000489072 UIMC1Q96RL1 719 aa28.44■■■□□ 2.14
HMGN1-217ENST00000489072 SLC9A7Q96T83 725 aa28.44■■■□□ 2.14
HMGN1-217ENST00000489072 PCDHA11Q9Y5I1 949 aa28.44■■■□□ 2.14
HMGN1-217ENST00000489072 PRUNE2Q8WUY3 3088 aa28.43■■■□□ 2.14
HMGN1-217ENST00000489072 DHX15O43143 795 aaKnown RBP28.43■■■□□ 2.14
HMGN1-217ENST00000489072 CCNE2O96020 404 aa28.43■■■□□ 2.14
HMGN1-217ENST00000489072 AK2P54819 239 aa28.43■■■□□ 2.14
HMGN1-217ENST00000489072 NLRP5P59047 1200 aa28.43■■■□□ 2.14
HMGN1-217ENST00000489072 PPFIA1Q13136 1202 aa28.43■■■□□ 2.14
HMGN1-217ENST00000489072 CPLX2Q6PUV4 134 aaKnown RBP28.43■■■□□ 2.14
HMGN1-217ENST00000489072 A0A0C4DFX4 3053 aa28.43■■■□□ 2.14
HMGN1-217ENST00000489072 DDX39AO00148 427 aaKnown RBP28.42■■■□□ 2.14
HMGN1-217ENST00000489072 PFKFB2O60825 505 aa28.42■■■□□ 2.14
HMGN1-217ENST00000489072 ATG7O95352 703 aa28.42■■■□□ 2.14
HMGN1-217ENST00000489072 WDR5P61964 334 aaKnown RBP28.42■■■□□ 2.14
HMGN1-217ENST00000489072 GRIK4Q16099 956 aa28.42■■■□□ 2.14
HMGN1-217ENST00000489072 RUFY4Q6ZNE9 571 aa28.42■■■□□ 2.14
HMGN1-217ENST00000489072 PHOSPHO2Q8TCD6 241 aa28.42■■■□□ 2.14
HMGN1-217ENST00000489072 OSBPL7Q9BZF2 842 aa28.42■■■□□ 2.14
HMGN1-217ENST00000489072 SLKQ9H2G2 1235 aaPredicted RBP28.42■■■□□ 2.14
HMGN1-217ENST00000489072 DTNBO60941 627 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms