RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 AGXT2Q9BYV1 514 aa26.32■■□□□ 1.8
COL9A3-213ENST00000489045 TMEM260Q9NX78 707 aa26.32■■□□□ 1.8
COL9A3-213ENST00000489045 MICAL3Q7RTP6 2002 aa26.32■■□□□ 1.8
COL9A3-213ENST00000489045 MAFGO15525 162 aa26.31■■□□□ 1.8
COL9A3-213ENST00000489045 CA3P07451 260 aa26.31■■□□□ 1.8
COL9A3-213ENST00000489045 PFKFB3Q16875 520 aaPredicted RBP26.31■■□□□ 1.8
COL9A3-213ENST00000489045 MXRA8Q9BRK3 442 aa26.31■■□□□ 1.8
COL9A3-213ENST00000489045 GSTTP1A0A1W2PQM5 241 aa26.3■■□□□ 1.8
COL9A3-213ENST00000489045 RSPH10B2B2RC85 870 aa26.3■■□□□ 1.8
COL9A3-213ENST00000489045 RSPH10BP0C881 870 aa26.3■■□□□ 1.8
COL9A3-213ENST00000489045 GNAT1P11488 350 aa26.3■■□□□ 1.8
COL9A3-213ENST00000489045 SCG2P13521 617 aa26.3■■□□□ 1.8
COL9A3-213ENST00000489045 CLK2P49760 499 aaKnown RBP26.3■■□□□ 1.8
COL9A3-213ENST00000489045 AP3B2Q13367 1082 aa26.3■■□□□ 1.8
COL9A3-213ENST00000489045 ADGRE1Q14246 886 aa26.3■■□□□ 1.8
COL9A3-213ENST00000489045 CYP2W1Q8TAV3 490 aa26.3■■□□□ 1.8
COL9A3-213ENST00000489045 SEPT1Q8WYJ6 367 aa26.3■■□□□ 1.8
COL9A3-213ENST00000489045 GLT8D2Q9H1C3 349 aa26.3■■□□□ 1.8
COL9A3-213ENST00000489045 DEFB103AP81534 67 aa26.29■■□□□ 1.8
COL9A3-213ENST00000489045 ARHGAP4P98171 946 aa26.29■■□□□ 1.8
COL9A3-213ENST00000489045 USP38Q8NB14 1042 aa26.29■■□□□ 1.8
COL9A3-213ENST00000489045 LMBR1Q8WVP7 490 aa26.29■■□□□ 1.8
COL9A3-213ENST00000489045 KCNH7Q9NS40 1196 aa26.29■■□□□ 1.8
COL9A3-213ENST00000489045 EMSYQ7Z589 1322 aa26.29■■□□□ 1.8
COL9A3-213ENST00000489045 SIP14410 1827 aa26.28■■□□□ 1.8
COL9A3-213ENST00000489045 TRANK1O15050 2925 aa26.28■■□□□ 1.8
COL9A3-213ENST00000489045 EPB41L2O43491 1005 aaKnown RBP26.28■■□□□ 1.8
COL9A3-213ENST00000489045 LGR5O75473 907 aa26.28■■□□□ 1.8
COL9A3-213ENST00000489045 SREBF1P36956 1147 aa26.28■■□□□ 1.8
COL9A3-213ENST00000489045 ADAM17P78536 824 aa26.28■■□□□ 1.8
COL9A3-213ENST00000489045 TMCO2Q7Z6W1 182 aaPredicted RBP26.28■■□□□ 1.8
COL9A3-213ENST00000489045 JPH1Q9HDC5 661 aaPredicted RBP26.28■■□□□ 1.8
COL9A3-213ENST00000489045 ABHD14A-ACY1A0A1B0GW23 586 aa26.27■■□□□ 1.8
COL9A3-213ENST00000489045 KIF28PB7ZC32 967 aa26.27■■□□□ 1.8
COL9A3-213ENST00000489045 CTSHP09668 335 aa26.27■■□□□ 1.8
COL9A3-213ENST00000489045 IGFBP4P22692 258 aa26.27■■□□□ 1.8
COL9A3-213ENST00000489045 MARK3P27448 753 aa26.27■■□□□ 1.8
COL9A3-213ENST00000489045 PKN1Q16512 942 aa26.27■■□□□ 1.8
COL9A3-213ENST00000489045 CEP55Q53EZ4 464 aa26.27■■□□□ 1.8
COL9A3-213ENST00000489045 PHKBQ93100 1093 aa26.27■■□□□ 1.8
COL9A3-213ENST00000489045 ERAP1Q9NZ08 941 aa26.27■■□□□ 1.8
COL9A3-213ENST00000489045 NRCAMQ92823 1304 aa26.27■■□□□ 1.8
COL9A3-213ENST00000489045 PRPF3O43395 683 aaKnown RBP26.26■■□□□ 1.79
COL9A3-213ENST00000489045 CAND2O75155 1236 aa26.26■■□□□ 1.79
COL9A3-213ENST00000489045 ARP10275 920 aa26.26■■□□□ 1.79
COL9A3-213ENST00000489045 IKBKEQ14164 716 aa26.26■■□□□ 1.79
COL9A3-213ENST00000489045 JAKMIP3Q5VZ66 844 aa26.26■■□□□ 1.79
COL9A3-213ENST00000489045 RUFY3Q7L099 469 aa26.26■■□□□ 1.79
COL9A3-213ENST00000489045 GLG1Q92896 1179 aa26.26■■□□□ 1.79
COL9A3-213ENST00000489045 SLC9A2Q9UBY0 812 aa26.26■■□□□ 1.79
COL9A3-213ENST00000489045 COL4A4P53420 1690 aaPredicted RBP26.25■■□□□ 1.79
COL9A3-213ENST00000489045 NFASCO94856 1347 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 ESYT2A0FGR8 921 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 TLL1O43897 1013 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 EFCAB14O75071 495 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 ARHGEF15O94989 841 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 NTRK3Q16288 839 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 DBF4BQ8NFT6 615 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 PPM1EQ8WY54 764 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 SDF4Q9BRK5 362 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 ZMYND12Q9H0C1 365 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 SMARCAD1Q9H4L7 1026 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 CERS4Q9HA82 394 aa26.25■■□□□ 1.79
COL9A3-213ENST00000489045 MEIS1O00470 390 aa26.24■■□□□ 1.79
COL9A3-213ENST00000489045 ADAMTS3O15072 1205 aa26.24■■□□□ 1.79
COL9A3-213ENST00000489045 PPFIA3O75145 1194 aa26.24■■□□□ 1.79
COL9A3-213ENST00000489045 PDIA3P30101 505 aaKnown RBP26.24■■□□□ 1.79
COL9A3-213ENST00000489045 ZNF76P36508 570 aa26.24■■□□□ 1.79
COL9A3-213ENST00000489045 EVCP57679 992 aa26.24■■□□□ 1.79
COL9A3-213ENST00000489045 TAP1Q03518 808 aa26.24■■□□□ 1.79
COL9A3-213ENST00000489045 PPFIA1Q13136 1202 aa26.24■■□□□ 1.79
COL9A3-213ENST00000489045 ITGB3BPQ13352 177 aaPredicted RBP26.24■■□□□ 1.79
COL9A3-213ENST00000489045 CCDC12Q8WUD4 166 aaPredicted RBP26.24■■□□□ 1.79
COL9A3-213ENST00000489045 NCOA5Q9HCD5 579 aaKnown RBP26.24■■□□□ 1.79
COL9A3-213ENST00000489045 ZSWIM6Q9HCJ5 1215 aa26.24■■□□□ 1.79
COL9A3-213ENST00000489045 AGO4Q9HCK5 861 aaKnown RBP26.24■■□□□ 1.79
COL9A3-213ENST00000489045 CCT2P78371 535 aaKnown RBP26.23■■□□□ 1.79
COL9A3-213ENST00000489045 AKAP17AQ02040 695 aaKnown RBP26.23■■□□□ 1.79
COL9A3-213ENST00000489045 TOB2Q14106 344 aaPredicted RBP26.23■■□□□ 1.79
COL9A3-213ENST00000489045 GRIK4Q16099 956 aa26.23■■□□□ 1.79
COL9A3-213ENST00000489045 PLEKHG4Q58EX7 1191 aa26.23■■□□□ 1.79
COL9A3-213ENST00000489045 PCYT2Q99447 389 aa26.23■■□□□ 1.79
COL9A3-213ENST00000489045 ZBED2Q9BTP6 218 aa26.23■■□□□ 1.79
COL9A3-213ENST00000489045 RNF26Q9BY78 433 aaPredicted RBP26.23■■□□□ 1.79
COL9A3-213ENST00000489045 OSBPL7Q9BZF2 842 aa26.23■■□□□ 1.79
COL9A3-213ENST00000489045 C6orf50Q9HD87 102 aa26.23■■□□□ 1.79
COL9A3-213ENST00000489045 PPP4R2Q9NY27 417 aa26.23■■□□□ 1.79
COL9A3-213ENST00000489045 IFNAR1P17181 557 aa26.22■■□□□ 1.79
COL9A3-213ENST00000489045 ACTR2P61160 394 aa26.22■■□□□ 1.79
COL9A3-213ENST00000489045 RUFY4Q6ZNE9 571 aa26.22■■□□□ 1.79
COL9A3-213ENST00000489045 NIPA1Q7RTP0 329 aa26.22■■□□□ 1.79
COL9A3-213ENST00000489045 REXO1Q8N1G1 1221 aaKnown RBP26.22■■□□□ 1.79
COL9A3-213ENST00000489045 SLC26A6Q9BXS9 759 aa26.22■■□□□ 1.79
COL9A3-213ENST00000489045 CYP46A1Q9Y6A2 500 aa26.22■■□□□ 1.79
COL9A3-213ENST00000489045 LCHNA4D1U4 455 aa26.21■■□□□ 1.79
COL9A3-213ENST00000489045 FAM86B1E9PN63 330 aa26.21■■□□□ 1.79
COL9A3-213ENST00000489045 RFXAPO00287 272 aa26.21■■□□□ 1.79
COL9A3-213ENST00000489045 GJB5O95377 273 aa26.21■■□□□ 1.79
COL9A3-213ENST00000489045 FAM86B2P0C5J1 330 aa26.21■■□□□ 1.79
COL9A3-213ENST00000489045 MKRN4PQ13434 485 aaPredicted RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms