RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 PFKFB1P16118 471 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 SYKP43405 635 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 USP11P51784 963 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 USP17L6PQ6QN14 398 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 SHC4Q6S5L8 630 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 MOXD1Q6UVY6 613 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 ATG4CQ96DT6 458 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 CCDC34Q96HJ3 373 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 TIGD1Q96MW7 591 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 PYM1Q9BRP8 204 aaKnown RBP13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 KCNH6Q9H252 994 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 MTIF3Q9H2K0 278 aaKnown RBP13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 GOLPH3LQ9H4A5 285 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 HOXC10Q9NYD6 342 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 ZDBF2Q9HCK1 2354 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 A0A1B0GVL5 298 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 SYCE3A1L190 88 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 RFXAPO00287 272 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 VWA5AO00534 786 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 WNT7AO00755 349 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 COBLO75128 1261 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 OR52Z1P0C646 297 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 POU3F3P20264 500 aaPredicted RBP13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 LONP1P36776 959 aaKnown RBP13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 TXLNAP40222 546 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 NDUFA8P51970 172 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 RABGGTBP53611 331 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 TKFCQ3LXA3 575 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 PPP4R3AQ6IN85 833 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 LRSAM1Q6UWE0 723 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 DTHD1Q6ZMT9 781 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 FMR1NBQ8N0W7 255 aaPredicted RBP13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 ENGASEQ8NFI3 743 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 HLA-CQ95604 372 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 CFAP54Q96N23 3096 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 CLIC6Q96NY7 704 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 MAF1Q9H063 256 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 RAVER2Q9HCJ3 691 aaKnown RBP13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 STARD7Q9NQZ5 370 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 MAP3K20Q9NYL2 800 aaKnown RBP13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 HPSEQ9Y251 543 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 ZNF536O15090 1300 aa13.6□□□□□ -0.23
HLA-DOB-209ENST00000488325 VWA3AA6NCI4 1184 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 GOLGA6L3A6NEY3 463 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 ATP2A1O14983 1001 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 STRNO43815 780 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 ZNF202O95125 648 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 CFBP00751 764 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 ALAS1P13196 640 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 MYOGP15173 224 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 SNW1Q13573 536 aaKnown RBP13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 TMEM266Q2M3C6 531 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 LBX2Q6XYB7 198 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 CPXCR1Q8N123 301 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 MB21D1Q8N884 522 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 C4orf32Q8N8J7 132 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 AGBL1Q96MI9 1066 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 PPP1R12CQ9BZL4 782 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 CSRNP2Q9H175 543 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 IL23AQ9NPF7 189 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 USP25Q9UHP3 1055 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 HOOK1Q9UJC3 728 aaKnown RBP13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 KCNH3Q9ULD8 1083 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 ADAMTS5Q9UNA0 930 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 SMCHD1A6NHR9 2005 aa13.59□□□□□ -0.23
HLA-DOB-209ENST00000488325 OPLAHO14841 1288 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 MARCH6O60337 910 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 SREBF1P36956 1147 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 ACLYP53396 1101 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 ARHGAP4P98171 946 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 FOXK2Q01167 660 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 GHRHRQ02643 423 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 CALCRLQ16602 461 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 RBM43Q6ZSC3 357 aaKnown RBP13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 AK8Q96MA6 479 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 SDF4Q9BRK5 362 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 RAB34Q9BZG1 259 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 DDX25Q9UHL0 483 aaKnown RBP13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 MRVI1Q9Y6F6 885 aa13.58□□□□□ -0.24
HLA-DOB-209ENST00000488325 CYP3A7-CYP3A51PA0A087WV96 503 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 SPDYE16A6NNV3 312 aaPredicted RBP13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 FGBP02675 491 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 CYP3A4P08684 503 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 CCDC192P0DO97 292 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 TAL1P17542 331 aaPredicted RBP13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 CYP3A7P24462 503 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 HSD17B4P51659 736 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 GRIN1Q05586 938 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 L1TD1Q5T7N2 865 aaKnown RBP13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 KANK3Q6NY19 840 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 ELOA2Q8IYF1 753 aaPredicted RBP13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 REPS2Q8NFH8 660 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 LENG1Q96BZ8 264 aaPredicted RBP13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 MAML3Q96JK9 1138 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 MBOAT7Q96N66 472 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 PHOX2BQ99453 314 aa13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 TSEN34Q9BSV6 310 aaKnown RBP13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 MOV10L1Q9BXT6 1211 aaKnown RBP13.57□□□□□ -0.24
HLA-DOB-209ENST00000488325 TEX13BQ9BXU2 312 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms