RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 FAM84AQ96KN4 292 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 SLC38A3Q99624 504 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 RNF38Q9H0F5 515 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 TMX1Q9H3N1 280 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 CAAP1Q9H8G2 361 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 RIC8BQ9NVN3 520 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 DTLQ9NZJ0 730 aa5.46□□□□□ -1.54
ECHDC1-217ENST00000488087 CBX4O00257 560 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 ETV2O00321 342 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 SCDO00767 359 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 N4BP3O15049 544 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 BUB1BO60566 1050 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 STAT3P40763 770 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 EPHB3P54753 998 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 IRF9Q00978 393 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 CPZQ66K79 652 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 HHIPL2Q6UWX4 724 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 ANKLE2Q86XL3 938 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 MIB1Q86YT6 1006 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 BOCQ9BWV1 1114 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 MTFR1LQ9H019 292 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 IFT57Q9NWB7 429 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 TELO2Q9Y4R8 837 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 PCDHA5Q9Y5H7 936 aa5.45□□□□□ -1.54
ECHDC1-217ENST00000488087 FAM83GA6ND36 823 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 PRAMEF25A6NGN4 478 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 ZNF891A8MT65 544 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 H7C1D1 291 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 TRAF5O00463 557 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 NFIBO00712 420 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 PTPN1P18031 435 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 FBLN1P23142 703 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 GJA4P35212 333 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 SCNN1BP51168 640 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 MECP2P51608 486 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 EPHA5P54756 1037 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 NKX3-2P78367 333 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 CACNB2Q08289 660 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 MESP2Q0VG99 397 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 SEPT7Q16181 437 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 SKOR2Q2VWA4 1001 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 PAN2Q504Q3 1202 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 ZNF648Q5T619 568 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 OGFOD2Q6N063 350 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 DDX46Q7L014 1031 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 RNF180Q86T96 592 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 NXPE1Q8N323 547 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 OR2W6PQ8NHA6 318 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 CPA5Q8WXQ8 436 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 PPP1R16BQ96T49 567 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 NGRNQ9NPE2 291 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 B4GALT6Q9UBX8 382 aa5.44□□□□□ -1.54
ECHDC1-217ENST00000488087 TCAF2A6NFQ2 919 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 FAM90A27PA6NNH2 459 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 CLASP2O75122 1294 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 F2P00734 622 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 CYP2C8P10632 490 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 NCLP19338 710 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 GLDCP23378 1020 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 IL2P60568 153 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 STRN3Q13033 797 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 TMEM132BQ14DG7 1078 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 ZNF174Q15697 407 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 PKN1Q16512 942 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 TEPPQ6URK8 271 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 ATG14Q6ZNE5 492 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 KRT26Q7Z3Y9 468 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 KIF18BQ86Y91 864 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 NOSTRINQ8IVI9 506 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 IGDCC3Q8IVU1 814 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 FAM26EQ8N5C1 309 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 TTLL11Q8NHH1 800 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 SMARCC2Q8TAQ2 1214 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 PCIF1Q9H4Z3 704 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 GCM1Q9NP62 436 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 IRAK3Q9Y616 596 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 IRS2Q9Y4H2 1338 aa5.43□□□□□ -1.54
ECHDC1-217ENST00000488087 LRG1P02750 347 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 C8AP07357 584 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 C8BP07358 591 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 VIL1P09327 827 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 ATF2P15336 505 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 CPEP16870 476 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 FAHP16930 419 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 LIMS1P48059 325 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 FOXO4P98177 505 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 FSTL4Q6MZW2 842 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 OTOP1Q7RTM1 612 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 B3GNT8Q7Z7M8 397 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 USP7Q93009 1102 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 SIGLEC10Q96LC7 697 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 GPR101Q96P66 508 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 ORAI3Q9BRQ5 295 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 KCNH7Q9NS40 1196 aa5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 THG1LQ9NWX6 298 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-217ENST00000488087 ACOT7O00154 380 aa5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 ATP2A2P16615 1042 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 KPNA1P52294 538 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 KIF11P52732 1056 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms