RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 GNAT1P11488 350 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 ADCY7P51828 1080 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 RCAN1P53805 252 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 ADAM17P78536 824 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 ARHGAP4P98171 946 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 IKBKEQ14164 716 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 SPRED2Q7Z698 418 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 LMBR1Q8WVP7 490 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 ARNTL2Q8WYA1 636 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 PGBD1Q96JS3 809 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 JAKMIP1Q96N16 626 aaKnown RBP14.08□□□□□ -0.16
SDC3-204ENST00000487984 EHMT1Q9H9B1 1298 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 JADE2Q9NQC1 790 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 BARHL2Q9NY43 387 aa14.08□□□□□ -0.16
SDC3-204ENST00000487984 NAP1L2Q9ULW6 460 aaPredicted RBP14.08□□□□□ -0.16
SDC3-204ENST00000487984 GSTTP1A0A1W2PQM5 241 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 hCG_1984214I3L0E3 225 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 MAFGO15525 162 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 CAND2O75155 1236 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 GJB5O95377 273 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 HSPA4P34932 840 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 ADD1P35611 737 aaKnown RBP14.07□□□□□ -0.16
SDC3-204ENST00000487984 METAP2P50579 478 aaKnown RBP eCLIP14.07□□□□□ -0.16
SDC3-204ENST00000487984 FGD1P98174 961 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 APOBRQ0VD83 1088 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
SDC3-204ENST00000487984 TEX2Q8IWB9 1127 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 MICALL1Q8N3F8 863 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 ZNF713Q8N859 430 aaPredicted RBP14.07□□□□□ -0.16
SDC3-204ENST00000487984 DBF4BQ8NFT6 615 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 CYP2W1Q8TAV3 490 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 SEPT1Q8WYJ6 367 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 ZBED2Q9BTP6 218 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 OSBPL7Q9BZF2 842 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 SNX14Q9Y5W7 946 aa14.07□□□□□ -0.16
SDC3-204ENST00000487984 SMCO2A6NFE2 343 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 FOSP01100 380 aaPredicted RBP14.06□□□□□ -0.16
SDC3-204ENST00000487984 MARK3P27448 753 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 PLEKHG4Q58EX7 1191 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 TJAP1Q5JTD0 557 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.06□□□□□ -0.16
SDC3-204ENST00000487984 Q6ZUG5 572 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 BRF1Q92994 677 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 RAD9AQ99638 391 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 MXRA8Q9BRK3 442 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 ANO3Q9BYT9 981 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 JPH1Q9HDC5 661 aaPredicted RBP14.06□□□□□ -0.16
SDC3-204ENST00000487984 KCNH7Q9NS40 1196 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 TMEM260Q9NX78 707 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 THEGQ9P2T0 379 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 MTCH2Q9Y6C9 303 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 NRCAMQ92823 1304 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 DOCK5Q9H7D0 1870 aa14.06□□□□□ -0.16
SDC3-204ENST00000487984 TRANK1O15050 2925 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 POU3F3P20264 500 aaPredicted RBP14.05□□□□□ -0.16
SDC3-204ENST00000487984 CLK2P49760 499 aaKnown RBP14.05□□□□□ -0.16
SDC3-204ENST00000487984 PPFIA1Q13136 1202 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 AP3B2Q13367 1082 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 PFKFB3Q16875 520 aaPredicted RBP14.05□□□□□ -0.16
SDC3-204ENST00000487984 CEP55Q53EZ4 464 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 KRT40Q6A162 431 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 FAM117BQ6P1L5 589 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 BLOC1S2Q6QNY1 142 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 RUFY4Q6ZNE9 571 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 ATXN2LQ8WWM7 1075 aaKnown RBP14.05□□□□□ -0.16
SDC3-204ENST00000487984 GLG1Q92896 1179 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 PCYT2Q99447 389 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 GLT8D2Q9H1C3 349 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 ERAP1Q9NZ08 941 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 SLC9A2Q9UBY0 812 aa14.05□□□□□ -0.16
SDC3-204ENST00000487984 PTPRSQ13332 1948 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 CCDC196A0A1B0GTZ2 297 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 GTPBP6O43824 516 aaPredicted RBP14.04□□□□□ -0.16
SDC3-204ENST00000487984 REC8O95072 547 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 AMHP03971 560 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 ARP10275 920 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 SCG2P13521 617 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 RPS6KB1P23443 525 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 SREBF1P36956 1147 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 GRB10Q13322 594 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 ITGB3BPQ13352 177 aaPredicted RBP14.04□□□□□ -0.16
SDC3-204ENST00000487984 GRIK4Q16099 956 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 FAM26DQ5JW98 314 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 MYOCDQ8IZQ8 938 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 FBXL16Q8N461 479 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 SEPT8Q92599 483 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 SYMPKQ92797 1274 aaKnown RBP14.04□□□□□ -0.16
SDC3-204ENST00000487984 SMARCAD1Q9H4L7 1026 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 NID2Q14112 1375 aa14.04□□□□□ -0.16
SDC3-204ENST00000487984 MBLAC1A4D2B0 266 aaPredicted RBP14.03□□□□□ -0.16
SDC3-204ENST00000487984 LINC01553A4QN01 128 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 MEIS1O00470 390 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 LPXNO60711 386 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 CHRNA1P02708 482 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 ACTR2P61160 394 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 MARCH8Q5T0T0 291 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 JAKMIP3Q5VZ66 844 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 TAF2Q6P1X5 1199 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 RPAINQ86UA6 219 aa14.03□□□□□ -0.16
SDC3-204ENST00000487984 GDPD5Q8WTR4 605 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms