RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 UIMC1Q96RL1 719 aa22.44■■□□□ 1.18
SMPDL3A-202ENST00000487215 SENP7Q9BQF6 1050 aa22.44■■□□□ 1.18
SMPDL3A-202ENST00000487215 DOCK5Q9H7D0 1870 aa22.44■■□□□ 1.18
SMPDL3A-202ENST00000487215 FAM50BQ9Y247 325 aa22.44■■□□□ 1.18
SMPDL3A-202ENST00000487215 TAF6LQ9Y6J9 622 aa22.44■■□□□ 1.18
SMPDL3A-202ENST00000487215 U3KPZ7 1027 aaPredicted RBP22.44■■□□□ 1.18
SMPDL3A-202ENST00000487215 C5orf67F2Z3F1 127 aa22.43■■□□□ 1.18
SMPDL3A-202ENST00000487215 DCXO43602 365 aa22.43■■□□□ 1.18
SMPDL3A-202ENST00000487215 GHRP10912 638 aa22.43■■□□□ 1.18
SMPDL3A-202ENST00000487215 PCNX4Q63HM2 1172 aa22.43■■□□□ 1.18
SMPDL3A-202ENST00000487215 USP17L6PQ6QN14 398 aa22.43■■□□□ 1.18
SMPDL3A-202ENST00000487215 RUFY4Q6ZNE9 571 aa22.43■■□□□ 1.18
SMPDL3A-202ENST00000487215 RALYLQ86SE5 291 aaKnown RBP22.43■■□□□ 1.18
SMPDL3A-202ENST00000487215 RPAINQ86UA6 219 aa22.43■■□□□ 1.18
SMPDL3A-202ENST00000487215 SMARCC2Q8TAQ2 1214 aa22.43■■□□□ 1.18
SMPDL3A-202ENST00000487215 PRKAG3Q9UGI9 489 aa22.43■■□□□ 1.18
SMPDL3A-202ENST00000487215 BAZ2BQ9UIF8 2168 aaKnown RBP22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 ADGRA3Q8IWK6 1321 aa22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 POTEB3A0JP26 581 aa22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 RB1P06400 928 aa22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 GSPT1P15170 499 aaKnown RBP22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 LTBRP36941 435 aa22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 PTH1RQ03431 593 aa22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 MGAT3Q09327 533 aa22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 CSPP1Q1MSJ5 1256 aa22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 POTEBQ6S5H4 581 aa22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 CATIPQ7Z7H3 387 aa22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 EHMT1Q9H9B1 1298 aa22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 RC3H2Q9HBD1 1191 aaKnown RBP22.42■■□□□ 1.18
SMPDL3A-202ENST00000487215 C19orf67A6NJJ6 358 aa22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 E7EWF7 191 aa22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 GRM6O15303 877 aa22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 BMPR1AP36894 532 aa22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 LPIN1Q14693 890 aa22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 SART3Q15020 963 aaKnown RBP22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 TAF2Q6P1X5 1199 aa22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 XRRA1Q6P2D8 792 aa22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 NLRX1Q86UT6 975 aa22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 ADHFE1Q8IWW8 467 aa22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 NCOA7Q8NI08 942 aa22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 C11orf84Q9BUA3 381 aaPredicted RBP22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 LMAN2LQ9H0V9 348 aa22.41■■□□□ 1.18
SMPDL3A-202ENST00000487215 PIK3CDO00329 1044 aa22.4■■□□□ 1.18
SMPDL3A-202ENST00000487215 MEIS2O14770 477 aa22.4■■□□□ 1.18
SMPDL3A-202ENST00000487215 NCK2O43639 380 aa22.4■■□□□ 1.18
SMPDL3A-202ENST00000487215 TCF7P36402 384 aaPredicted RBP22.4■■□□□ 1.18
SMPDL3A-202ENST00000487215 ANTXR2P58335 489 aa22.4■■□□□ 1.18
SMPDL3A-202ENST00000487215 CTC1Q2NKJ3 1217 aa22.4■■□□□ 1.18
SMPDL3A-202ENST00000487215 CUL5Q93034 780 aa22.4■■□□□ 1.18
SMPDL3A-202ENST00000487215 SPZ1Q9BXG8 430 aa22.4■■□□□ 1.18
SMPDL3A-202ENST00000487215 RWDD3Q9Y3V2 267 aa22.4■■□□□ 1.18
SMPDL3A-202ENST00000487215 ATG2AQ2TAZ0 1938 aa22.39■■□□□ 1.18
SMPDL3A-202ENST00000487215 ATP9AO75110 1047 aa22.39■■□□□ 1.17
SMPDL3A-202ENST00000487215 HYAL1Q12794 435 aa22.39■■□□□ 1.17
SMPDL3A-202ENST00000487215 PPFIA1Q13136 1202 aa22.39■■□□□ 1.17
SMPDL3A-202ENST00000487215 TTC22Q5TAA0 569 aa22.39■■□□□ 1.17
SMPDL3A-202ENST00000487215 ALYREFQ86V81 257 aaKnown RBP22.39■■□□□ 1.17
SMPDL3A-202ENST00000487215 GIMAP8Q8ND71 665 aaPredicted RBP22.39■■□□□ 1.17
SMPDL3A-202ENST00000487215 EXOC6Q8TAG9 804 aa22.39■■□□□ 1.17
SMPDL3A-202ENST00000487215 IGDCC4Q8TDY8 1250 aa22.39■■□□□ 1.17
SMPDL3A-202ENST00000487215 CLP1Q92989 425 aaKnown RBP22.39■■□□□ 1.17
SMPDL3A-202ENST00000487215 RRP36Q96EU6 259 aaKnown RBP22.39■■□□□ 1.17
SMPDL3A-202ENST00000487215 MUC6Q6W4X9 2439 aa22.39■■□□□ 1.17
SMPDL3A-202ENST00000487215 ENPP3O14638 875 aa22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 KCNA2P16389 499 aa22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 MARK3P27448 753 aa22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 PDE4AP27815 886 aa22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 DLX2Q07687 328 aaPredicted RBP22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 CLUL1Q15846 466 aa22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 GRIK4Q16099 956 aa22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 RSPH3Q86UC2 560 aa22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 ZNF689Q96CS4 500 aaPredicted RBP22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 GPRASP2Q96D09 838 aa22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 MYL10Q9BUA6 226 aa22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 TUBE1Q9UJT0 475 aa22.38■■□□□ 1.17
SMPDL3A-202ENST00000487215 GSTTP1A0A1W2PQM5 241 aa22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 MBLAC1A4D2B0 266 aaPredicted RBP22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 IRS1P35568 1242 aa22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 BTG3Q14201 252 aaPredicted RBP22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 SMAD2Q15796 467 aaKnown RBP22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 FBXO47Q5MNV8 452 aa22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 MB21D2Q8IYB1 491 aaPredicted RBP22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 CTCFLQ8NI51 663 aaPredicted RBP22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 DNAJB3Q8WWF6 145 aa22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 RUFY2Q8WXA3 655 aa22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 SEPT1Q8WYJ6 367 aa22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 MAP3K14Q99558 947 aa22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 ERAP1Q9NZ08 941 aa22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 CDY2AQ9Y6F7 541 aa22.37■■□□□ 1.17
SMPDL3A-202ENST00000487215 MBTPS2O43462 519 aa22.36■■□□□ 1.17
SMPDL3A-202ENST00000487215 CSPG5O95196 566 aa22.36■■□□□ 1.17
SMPDL3A-202ENST00000487215 MMP1P03956 469 aa22.36■■□□□ 1.17
SMPDL3A-202ENST00000487215 ITGB5P18084 799 aa22.36■■□□□ 1.17
SMPDL3A-202ENST00000487215 CHMLP26374 656 aa22.36■■□□□ 1.17
SMPDL3A-202ENST00000487215 GTF2F1P35269 517 aaKnown RBP eCLIP22.36■■□□□ 1.17
SMPDL3A-202ENST00000487215 MARCH8Q5T0T0 291 aa22.36■■□□□ 1.17
SMPDL3A-202ENST00000487215 TSHZ1Q6ZSZ6 1077 aa22.36■■□□□ 1.17
SMPDL3A-202ENST00000487215 ZNF654Q8IZM8 581 aa22.36■■□□□ 1.17
SMPDL3A-202ENST00000487215 LINC01599Q8WXQ3 324 aa22.36■■□□□ 1.17
SMPDL3A-202ENST00000487215 CDHR1Q96JP9 859 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms