RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CIITAP33076 1130 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 CKAP4Q07065 602 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 SMC1AQ14683 1233 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 CC2D2BQ6DHV5 1058 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 RPGRIP1Q96KN7 1286 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 GBP3Q9H0R5 595 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 DEF6Q9H4E7 631 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 SH2D4AQ9H788 454 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 MACROD2A1Z1Q3 448 aa19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 FAM86B1E9PN63 330 aa19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 FAM86B2P0C5J1 330 aa19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 VSNL1P62760 191 aa19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 RRP1BQ14684 758 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 PPP4R3CPQ6ZMV5 832 aa19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 CACNA2D4Q7Z3S7 1137 aa19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 TRIM59Q8IWR1 403 aa19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 CCDC155Q8N6L0 562 aa19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 SMCR8Q8TEV9 937 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 PRMT6Q96LA8 375 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 CSRNP1Q96S65 589 aa19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 MMS19Q96T76 1030 aa19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 CEP72Q9P209 647 aa19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 PPP1R1BQ9UD71 204 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-207ENST00000486828 A0A1W2PRG0 241 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 OPLAHO14841 1288 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 SRGAP2O75044 1071 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 SPATA31C1P0DKV0 1188 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 RAD51AP2Q09MP3 1159 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 MAPK8IP2Q13387 824 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 EDRF1Q3B7T1 1238 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 WDR93Q6P2C0 686 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 SYT2Q8N9I0 419 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 TRIM58Q8NG06 486 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 NUCKS1Q9H1E3 243 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 ABCB6Q9NP58 842 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 DNM3Q9UQ16 869 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 SSU72P8A0A1W2PR75 194 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 AKR1B10O60218 316 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 GIT2Q14161 759 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 SUPT20HQ8NEM7 779 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 HERC5Q9UII4 1024 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 FAM184BQ9ULE4 1060 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 L1RE1Q9UN81 338 aa19.86■□□□□ 0.77
PDLIM7-207ENST00000486828 YDJCA8MPS7 323 aa19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 PIK3CDO00329 1044 aa19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 TACC1O75410 805 aa19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 CYP3A4P08684 503 aa19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 DPEP1P16444 411 aa19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 OAS2P29728 719 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 TGFB2P61812 414 aa19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 PSMC6P62333 389 aa19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 ASTE1Q2TB18 679 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 HDXQ7Z353 690 aa19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 MSL3Q8N5Y2 521 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 SYN2Q92777 582 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 PRR12Q9ULL5 1215 aa19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 CD2APQ9Y5K6 639 aa19.85■□□□□ 0.77
PDLIM7-207ENST00000486828 MSH4O15457 936 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 NOL4O94818 638 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 TAL1P17542 331 aaPredicted RBP19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 KCNA3P22001 575 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 USP14P54578 494 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 HGSNATQ68CP4 663 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 ZHX3Q9H4I2 956 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.84■□□□□ 0.772e-6■■■■■ 52.9
PDLIM7-207ENST00000486828 VAV3Q9UKW4 847 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 JRKLQ9Y4A0 524 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 MEIS1O00470 390 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 PJA2O43164 708 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 HOXA13P31271 388 aaPredicted RBP19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 PABPC4Q13310 644 aaKnown RBP eCLIP19.84■□□□□ 0.772e-6■■■□□ 14.6
PDLIM7-207ENST00000486828 ADAM9Q13443 819 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 CAPZA3Q96KX2 299 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 LSM14BQ9BX40 385 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 ZHX1Q9UKY1 873 aaPredicted RBP19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 CAPN6Q9Y6Q1 641 aa19.84■□□□□ 0.77
PDLIM7-207ENST00000486828 CETN3O15182 167 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 PPIP5K2O43314 1243 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 MAGEA1P43355 309 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 FAM83BQ5T0W9 1011 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 TEX2Q8IWB9 1127 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 SPICE1Q8N0Z3 855 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 TXLNBQ8N3L3 684 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 REEP2Q9BRK0 252 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 POLR3CQ9BUI4 534 aaPredicted RBP19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 MLXIPQ9HAP2 919 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 ARHGEF10LQ9HCE6 1279 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 NLRC4Q9NPP4 1024 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 JADE2Q9NQC1 790 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 TMOD2Q9NZR1 351 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 TRAF3IP3Q9Y228 551 aa19.83■□□□□ 0.77
PDLIM7-207ENST00000486828 ATAD5Q96QE3 1844 aa19.83■□□□□ 0.76
PDLIM7-207ENST00000486828 RBAK-RBAKDNI3L0D1 243 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 POLR3GO15318 223 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 CASP5P51878 434 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 STAT2P52630 851 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 TRAF1Q13077 416 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 SLC9C1Q4G0N8 1177 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 SFMBT2Q5VUG0 894 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms