RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SERINC5Q86VE9 423 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 UBALD2Q8IYN6 164 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 C7orf31Q8N865 590 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 VN1R2Q8NFZ6 395 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 SEPT8Q92599 483 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 ARHGAP45Q92619 1136 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 GMCL1Q96IK5 515 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 PLVAPQ9BX97 442 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 SMOC2Q9H3U7 446 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 ARPP21Q9UBL0 812 aaPredicted RBP9.81□□□□□ -0.84
XRN1-212ENST00000486211 CCPG1Q9ULG6 757 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 PRR12Q9ULL5 1215 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 ADGRG1Q9Y653 693 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 PLIN4Q96Q06 1357 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 F2P00734 622 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 LMNAP02545 664 aaKnown RBP9.8□□□□□ -0.84
XRN1-212ENST00000486211 THPOP40225 353 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 CLCN5P51795 746 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 PDE4DQ08499 809 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 SBK1Q52WX2 424 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 CWF19L1Q69YN2 538 aaKnown RBP9.8□□□□□ -0.84
XRN1-212ENST00000486211 BLOC1S3Q6QNY0 202 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 RASGRP2Q7LDG7 609 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 AACSQ86V21 672 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 STK11IPQ8N1F8 1099 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 SPPL3Q8TCT6 385 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 ATP8B4Q8TF62 1192 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 PPP2R3CQ969Q6 453 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 ALG1Q9BT22 464 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 MKNK2Q9HBH9 465 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 RALYQ9UKM9 306 aaKnown RBP9.8□□□□□ -0.84
XRN1-212ENST00000486211 SORCS3Q9UPU3 1222 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 TNNQ9UQP3 1299 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 SLC4A4Q9Y6R1 1079 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 OTOGLQ3ZCN5 2332 aa9.8□□□□□ -0.84
XRN1-212ENST00000486211 PTPDC1A2A3K4 754 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 GH1P01241 217 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 ITGB1P05556 798 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 ZNF286BP0CG31 522 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 CASTP20810 708 aaKnown RBP9.79□□□□□ -0.84
XRN1-212ENST00000486211 SLC1A4P43007 532 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 IKQ13123 557 aaPredicted RBP9.79□□□□□ -0.84
XRN1-212ENST00000486211 MTMR3Q13615 1198 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 ANGPT1Q15389 498 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 DGKDQ16760 1214 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 LY6KQ17RY6 165 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 KIAA0753Q2KHM9 967 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 KCTD1Q719H9 257 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 ZBTB33Q86T24 672 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 RBM23Q86U06 439 aaKnown RBP9.79□□□□□ -0.84
XRN1-212ENST00000486211 TRMT2AQ8IZ69 625 aaKnown RBP9.79□□□□□ -0.84
XRN1-212ENST00000486211 CLEC4DQ8WXI8 215 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 P2RX5Q93086 422 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 CHMP4CQ96CF2 233 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 ZNF689Q96CS4 500 aaPredicted RBP9.79□□□□□ -0.84
XRN1-212ENST00000486211 DDRGK1Q96HY6 314 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 DNAJC2Q99543 621 aaKnown RBP9.79□□□□□ -0.84
XRN1-212ENST00000486211 S1PR5Q9H228 398 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 RANBP17Q9H2T7 1088 aaKnown RBP9.79□□□□□ -0.84
XRN1-212ENST00000486211 TMEM134Q9H6X4 195 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 KIAA1671Q9BY89 1806 aa9.79□□□□□ -0.84
XRN1-212ENST00000486211 SPTBN2O15020 2390 aa9.78□□□□□ -0.84
XRN1-212ENST00000486211 PI15O43692 258 aa9.78□□□□□ -0.84
XRN1-212ENST00000486211 PRDM1O75626 825 aa9.78□□□□□ -0.84
XRN1-212ENST00000486211 HOXD8P13378 290 aaPredicted RBP9.78□□□□□ -0.84
XRN1-212ENST00000486211 TRIM27P14373 513 aa9.78□□□□□ -0.84
XRN1-212ENST00000486211 MCCP23508 829 aa9.78□□□□□ -0.84
XRN1-212ENST00000486211 CALML3P27482 149 aa9.78□□□□□ -0.84
XRN1-212ENST00000486211 HOXC8P31273 242 aa9.78□□□□□ -0.84
XRN1-212ENST00000486211 RSPO4Q2I0M5 234 aaPredicted RBP9.78□□□□□ -0.84
XRN1-212ENST00000486211 KMT5BQ4FZB7 885 aa9.78□□□□□ -0.84
XRN1-212ENST00000486211 CCDC105Q8IYK2 499 aa9.78□□□□□ -0.84
XRN1-212ENST00000486211 KATNAL1Q9BW62 490 aa9.78□□□□□ -0.84
XRN1-212ENST00000486211 PUS7LQ9H0K6 701 aaKnown RBP9.78□□□□□ -0.84
XRN1-212ENST00000486211 SEMA4AQ9H3S1 761 aa9.78□□□□□ -0.84
XRN1-212ENST00000486211 ISY1Q9ULR0 285 aaKnown RBP9.78□□□□□ -0.84
XRN1-212ENST00000486211 RCCD1A6NED2 376 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 GSG1L2A8MUP6 293 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 RNF223E7ERA6 249 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 CT47B1P0C2W7 299 aaPredicted RBP9.77□□□□□ -0.85
XRN1-212ENST00000486211 SP100P23497 879 aaPredicted RBP9.77□□□□□ -0.85
XRN1-212ENST00000486211 SLC19A1P41440 591 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 RARSP54136 660 aaKnown RBP9.77□□□□□ -0.85
XRN1-212ENST00000486211 RPS6P62753 249 aaKnown RBP9.77□□□□□ -0.85
XRN1-212ENST00000486211 KCNC3Q14003 757 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 UBE3CQ15386 1083 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 NAALADL2Q58DX5 795 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 RCSD1Q6JBY9 416 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 CHST3Q7LGC8 479 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 DNERQ8NFT8 737 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 NEDD1Q8NHV4 660 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 KCNG4Q8TDN1 519 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 APBB2Q92870 758 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 COL26A1Q96A83 441 aa9.77□□□□□ -0.85
XRN1-212ENST00000486211 EMID1Q96A84 441 aaPredicted RBP9.77□□□□□ -0.85
XRN1-212ENST00000486211 MRPL42Q9Y6G3 142 aaKnown RBP9.77□□□□□ -0.85
XRN1-212ENST00000486211 MYO10Q9HD67 2058 aa9.76□□□□□ -0.85
XRN1-212ENST00000486211 PER2O15055 1255 aa9.76□□□□□ -0.85
XRN1-212ENST00000486211 ACTN4O43707 911 aaKnown RBP9.76□□□□□ -0.85
XRN1-212ENST00000486211 DGKIO75912 1065 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms