RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 METAP2P50579 478 aaKnown RBP eCLIP20.24■□□□□ 0.83
MCF2L-226ENST00000486210 CCT2P78371 535 aaKnown RBP20.24■□□□□ 0.83
MCF2L-226ENST00000486210 ME3Q16798 604 aa20.24■□□□□ 0.83
MCF2L-226ENST00000486210 RTN1Q16799 776 aa20.24■□□□□ 0.83
MCF2L-226ENST00000486210 ARHGEF16Q5VV41 709 aa20.24■□□□□ 0.83
MCF2L-226ENST00000486210 MYOCDQ8IZQ8 938 aa20.24■□□□□ 0.83
MCF2L-226ENST00000486210 CMTR1Q8N1G2 835 aaKnown RBP20.24■□□□□ 0.83
MCF2L-226ENST00000486210 CTCFLQ8NI51 663 aaPredicted RBP20.24■□□□□ 0.83
MCF2L-226ENST00000486210 NCOA5Q9HCD5 579 aaKnown RBP20.24■□□□□ 0.83
MCF2L-226ENST00000486210 PXMP2Q9NR77 195 aa20.24■□□□□ 0.83
MCF2L-226ENST00000486210 MRVI1Q9Y6F6 885 aa20.24■□□□□ 0.83
MCF2L-226ENST00000486210 OPLAHO14841 1288 aa20.23■□□□□ 0.83
MCF2L-226ENST00000486210 ST18O60284 1047 aa20.23■□□□□ 0.83
MCF2L-226ENST00000486210 EIF3JO75822 258 aaKnown RBP20.23■□□□□ 0.83
MCF2L-226ENST00000486210 NR3C2P08235 984 aa20.23■□□□□ 0.83
MCF2L-226ENST00000486210 SSTR3P32745 418 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-226ENST00000486210 ADD1P35611 737 aaKnown RBP20.23■□□□□ 0.83
MCF2L-226ENST00000486210 RCAN1P53805 252 aa20.23■□□□□ 0.83
MCF2L-226ENST00000486210 LAMC2Q13753 1193 aa20.23■□□□□ 0.83
MCF2L-226ENST00000486210 HSDL1Q3SXM5 330 aa20.23■□□□□ 0.83
MCF2L-226ENST00000486210 DHX37Q8IY37 1157 aaKnown RBP20.23■□□□□ 0.83
MCF2L-226ENST00000486210 SRBD1Q8N5C6 995 aaKnown RBP20.23■□□□□ 0.83
MCF2L-226ENST00000486210 MRPL38Q96DV4 380 aaKnown RBP20.23■□□□□ 0.83
MCF2L-226ENST00000486210 OSBPL7Q9BZF2 842 aa20.23■□□□□ 0.83
MCF2L-226ENST00000486210 NID2Q14112 1375 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 RALGAPA2Q2PPJ7 1873 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 H3BQ06 376 aaPredicted RBP20.22■□□□□ 0.83
MCF2L-226ENST00000486210 CYTH3O43739 400 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 SORBS3O60504 671 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 KIF5BP33176 963 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 SCRN1Q12765 414 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 TRAF1Q13077 416 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 EPC2Q52LR7 807 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 MYSM1Q5VVJ2 828 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 TMTC3Q6ZXV5 915 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 NECAB1Q8N987 351 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 AMNQ9BXJ7 453 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 LIMCH1Q9UPQ0 1083 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 COL4A6Q14031 1691 aa20.22■□□□□ 0.83
MCF2L-226ENST00000486210 RSPH10B2B2RC85 870 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 PFKFB2O60825 505 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 CFBP00751 764 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 AMHP03971 560 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 RSPH10BP0C881 870 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 ST3GAL1Q11201 340 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 PLEKHG4Q58EX7 1191 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 SERINC5Q86VE9 423 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 CCDC82Q8N4S0 544 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 C16orf70Q9BSU1 422 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 SLKQ9H2G2 1235 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-226ENST00000486210 JMJD4Q9H9V9 463 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 RBM28Q9NW13 759 aaKnown RBP20.21■□□□□ 0.83
MCF2L-226ENST00000486210 EMSYQ7Z589 1322 aa20.21■□□□□ 0.83
MCF2L-226ENST00000486210 DTNBO60941 627 aa20.2■□□□□ 0.82
MCF2L-226ENST00000486210 ALADP13716 330 aa20.2■□□□□ 0.82
MCF2L-226ENST00000486210 THPOP40225 353 aa20.2■□□□□ 0.82
MCF2L-226ENST00000486210 HSD17B4P51659 736 aa20.2■□□□□ 0.82
MCF2L-226ENST00000486210 SP2Q02086 613 aa20.2■□□□□ 0.82
MCF2L-226ENST00000486210 GHRHRQ02643 423 aa20.2■□□□□ 0.82
MCF2L-226ENST00000486210 FUT2Q10981 343 aa20.2■□□□□ 0.82
MCF2L-226ENST00000486210 PDCD2LQ9BRP1 358 aa20.2■□□□□ 0.82
MCF2L-226ENST00000486210 RIOX1Q9H6W3 641 aa20.2■□□□□ 0.82
MCF2L-226ENST00000486210 POTEB3A0JP26 581 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 H3BNC9 293 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 PPFIA4O75335 1185 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 HOXC8P31273 242 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 GNAQP50148 359 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 COL19A1Q14993 1142 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 PUS10Q3MIT2 529 aaKnown RBP20.19■□□□□ 0.82
MCF2L-226ENST00000486210 TCEAL5Q5H9L2 206 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 CELF3Q5SZQ8 465 aaKnown RBP20.19■□□□□ 0.82
MCF2L-226ENST00000486210 POTEBQ6S5H4 581 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 BANK1Q8NDB2 785 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 GPKOWQ92917 476 aaPredicted RBP eCLIP20.19■□□□□ 0.82
MCF2L-226ENST00000486210 TOP1MTQ969P6 601 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 SAMD11Q96NU1 681 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 DOCK5Q9H7D0 1870 aa20.19■□□□□ 0.82
MCF2L-226ENST00000486210 PIEZO1Q92508 2521 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.18■□□□□ 0.82
MCF2L-226ENST00000486210 ZBTB5O15062 677 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 PPFIA3O75145 1194 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 GGPS1O95749 300 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 MYCLP12524 364 aaPredicted RBP20.18■□□□□ 0.82
MCF2L-226ENST00000486210 GPM6BQ13491 265 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 NTRK3Q16288 839 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 PTPROQ16827 1216 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 TIGD5Q53EQ6 642 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 SAMD3Q8N6K7 520 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 IL31RAQ8NI17 732 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 PIBF1Q8WXW3 757 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 GTF3C6Q969F1 213 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 PABPC5Q96DU9 382 aaKnown RBP20.18■□□□□ 0.82
MCF2L-226ENST00000486210 ZFP91Q96JP5 570 aaPredicted RBP20.18■□□□□ 0.82
MCF2L-226ENST00000486210 SPATA33Q96N06 139 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 UIMC1Q96RL1 719 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 SPZ1Q9BXG8 430 aa20.18■□□□□ 0.82
MCF2L-226ENST00000486210 MAP3K20Q9NYL2 800 aaKnown RBP20.18■□□□□ 0.82
MCF2L-226ENST00000486210 MYO7AQ13402 2215 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 hCG_1642624A0A1W2PR95 340 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 TREHO43280 583 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms