RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SREBF1P36956 1147 aa20.13■□□□□ 0.81
COL6A1-204ENST00000486023 CLK2P49760 499 aaKnown RBP20.13■□□□□ 0.81
COL6A1-204ENST00000486023 EVCP57679 992 aa20.13■□□□□ 0.81
COL6A1-204ENST00000486023 REXO1Q8N1G1 1221 aaKnown RBP20.13■□□□□ 0.81
COL6A1-204ENST00000486023 MYLIPQ8WY64 445 aa20.13■□□□□ 0.81
COL6A1-204ENST00000486023 ZNF274Q96GC6 653 aaPredicted RBP20.13■□□□□ 0.81
COL6A1-204ENST00000486023 ZMYND12Q9H0C1 365 aa20.13■□□□□ 0.81
COL6A1-204ENST00000486023 ZNF576Q9H609 170 aa20.13■□□□□ 0.81
COL6A1-204ENST00000486023 JPH1Q9HDC5 661 aaPredicted RBP20.13■□□□□ 0.81
COL6A1-204ENST00000486023 SLC9A2Q9UBY0 812 aa20.13■□□□□ 0.81
COL6A1-204ENST00000486023 STXBP5LQ9Y2K9 1186 aa20.13■□□□□ 0.81
COL6A1-204ENST00000486023 CTSHP09668 335 aa20.12■□□□□ 0.81
COL6A1-204ENST00000486023 ATP2A2P16615 1042 aaKnown RBP20.12■□□□□ 0.81
COL6A1-204ENST00000486023 CPLX2Q6PUV4 134 aaKnown RBP20.12■□□□□ 0.81
COL6A1-204ENST00000486023 PLA2G4DQ86XP0 818 aa20.12■□□□□ 0.81
COL6A1-204ENST00000486023 NKX2-4Q9H2Z4 354 aa20.12■□□□□ 0.81
COL6A1-204ENST00000486023 AGO4Q9HCK5 861 aaKnown RBP20.12■□□□□ 0.81
COL6A1-204ENST00000486023 NID2Q14112 1375 aa20.11■□□□□ 0.81
COL6A1-204ENST00000486023 GNAT1P11488 350 aa20.11■□□□□ 0.81
COL6A1-204ENST00000486023 MYOGP15173 224 aa20.11■□□□□ 0.81
COL6A1-204ENST00000486023 IGBP1P78318 339 aa20.11■□□□□ 0.81
COL6A1-204ENST00000486023 GRIN2CQ14957 1233 aa20.11■□□□□ 0.81
COL6A1-204ENST00000486023 CCDC148Q8NFR7 591 aa20.11■□□□□ 0.81
COL6A1-204ENST00000486023 BICD2Q8TD16 824 aa20.11■□□□□ 0.81
COL6A1-204ENST00000486023 SLKQ9H2G2 1235 aaPredicted RBP20.11■□□□□ 0.81
COL6A1-204ENST00000486023 AZI2Q9H6S1 392 aa20.11■□□□□ 0.81
COL6A1-204ENST00000486023 ESYT2A0FGR8 921 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 RSPH10B2B2RC85 870 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 FAM86B1E9PN63 330 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 MEIS1O00470 390 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 NBNO60934 754 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 SEC24BO95487 1268 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 FAM86B2P0C5J1 330 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 RSPH10BP0C881 870 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 ACTR2P61160 394 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 ITGB3BPQ13352 177 aaPredicted RBP20.1■□□□□ 0.81
COL6A1-204ENST00000486023 GPNMBQ14956 572 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 RAB30Q15771 203 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 TRIM71Q2Q1W2 868 aaKnown RBP20.1■□□□□ 0.81
COL6A1-204ENST00000486023 SERINC5Q86VE9 423 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 SLC17A8Q8NDX2 589 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 SMARCAD1Q9H4L7 1026 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 SLC28A3Q9HAS3 691 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 ERAP1Q9NZ08 941 aa20.1■□□□□ 0.81
COL6A1-204ENST00000486023 YBX2Q9Y2T7 364 aaKnown RBP20.1■□□□□ 0.81
COL6A1-204ENST00000486023 PPFIA1Q13136 1202 aa20.09■□□□□ 0.81
COL6A1-204ENST00000486023 TEX2Q8IWB9 1127 aa20.09■□□□□ 0.81
COL6A1-204ENST00000486023 LMBR1Q8WVP7 490 aa20.09■□□□□ 0.81
COL6A1-204ENST00000486023 AIFM3Q96NN9 605 aa20.09■□□□□ 0.81
COL6A1-204ENST00000486023 TPCN1Q9ULQ1 816 aa20.09■□□□□ 0.81
COL6A1-204ENST00000486023 BACH1O14867 736 aa20.08■□□□□ 0.81
COL6A1-204ENST00000486023 DEXIO95424 95 aa20.08■□□□□ 0.81
COL6A1-204ENST00000486023 FOSL2P15408 326 aa20.08■□□□□ 0.81
COL6A1-204ENST00000486023 KCNJ6P48051 423 aa20.08■□□□□ 0.81
COL6A1-204ENST00000486023 AK2P54819 239 aa20.08■□□□□ 0.81
COL6A1-204ENST00000486023 ANAPC15P60006 121 aa20.08■□□□□ 0.81
COL6A1-204ENST00000486023 SCRN1Q12765 414 aa20.08■□□□□ 0.81
COL6A1-204ENST00000486023 PRR16Q569H4 304 aa20.08■□□□□ 0.81
COL6A1-204ENST00000486023 MCTP2Q6DN12 878 aa20.08■□□□□ 0.81
COL6A1-204ENST00000486023 TMCO2Q7Z6W1 182 aaPredicted RBP20.08■□□□□ 0.81
COL6A1-204ENST00000486023 ZNF577Q9BSK1 485 aa20.08■□□□□ 0.81
COL6A1-204ENST00000486023 TRPC6Q9Y210 931 aa20.08■□□□□ 0.81
COL6A1-204ENST00000486023 NFASCO94856 1347 aa20.07■□□□□ 0.8
COL6A1-204ENST00000486023 NRCAMQ92823 1304 aa20.07■□□□□ 0.8
COL6A1-204ENST00000486023 GRIK4Q16099 956 aa20.07■□□□□ 0.8
COL6A1-204ENST00000486023 TCTN1Q2MV58 587 aa20.07■□□□□ 0.8
COL6A1-204ENST00000486023 CNKSR3Q6P9H4 555 aa20.07■□□□□ 0.8
COL6A1-204ENST00000486023 TRMT1LQ7Z2T5 733 aaKnown RBP20.07■□□□□ 0.8
COL6A1-204ENST00000486023 NECAB1Q8N987 351 aa20.07■□□□□ 0.8
COL6A1-204ENST00000486023 ZBTB10Q96DT7 871 aa20.07■□□□□ 0.8
COL6A1-204ENST00000486023 PCYT2Q99447 389 aa20.07■□□□□ 0.8
COL6A1-204ENST00000486023 PRDM12Q9H4Q4 367 aa20.07■□□□□ 0.8
COL6A1-204ENST00000486023 DOCK5Q9H7D0 1870 aa20.07■□□□□ 0.8
COL6A1-204ENST00000486023 COL6A3P12111 3177 aa20.07■□□□□ 0.8
COL6A1-204ENST00000486023 TMEM265A0A087WTH1 108 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 IPO5O00410 1097 aaKnown RBP20.06■□□□□ 0.8
COL6A1-204ENST00000486023 PARNO95453 639 aaKnown RBP20.06■□□□□ 0.8
COL6A1-204ENST00000486023 CYP3A4P08684 503 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 STAT5BP51692 787 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 NEK4P51957 841 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 RBL2Q08999 1139 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 MBTPS1Q14703 1052 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 PPP2R2DQ66LE6 453 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 FAM117BQ6P1L5 589 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 TRAF7Q6Q0C0 670 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 RUFY4Q6ZNE9 571 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 ZBED2Q9BTP6 218 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 CERS4Q9HA82 394 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 SH3GLB2Q9NR46 395 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 TCEAL9Q9UHQ7 104 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 PCDHA4Q9UN74 947 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 KCNJ14Q9UNX9 436 aa20.06■□□□□ 0.8
COL6A1-204ENST00000486023 SCN5AQ14524 2016 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 IGLV3-22A0A075B6J6 115 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 EIF5BO60841 1220 aaKnown RBP20.05■□□□□ 0.8
COL6A1-204ENST00000486023 LGR5O75473 907 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 CDKL5O76039 1030 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 CCNE2O96020 404 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 INSRRP14616 1297 aa20.05■□□□□ 0.8
COL6A1-204ENST00000486023 HOXC8P31273 242 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms