RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 CYP2C9P11712 490 aa19.36■□□□□ 0.69
VIM-205ENST00000485947 SCG2P13521 617 aa19.36■□□□□ 0.69
VIM-205ENST00000485947 MFSD10Q14728 455 aa19.36■□□□□ 0.69
VIM-205ENST00000485947 CLEC17AQ6ZS10 378 aa19.36■□□□□ 0.69
VIM-205ENST00000485947 ZSCAN16Q9H4T2 348 aaPredicted RBP19.36■□□□□ 0.69
VIM-205ENST00000485947 SH3GLB2Q9NR46 395 aa19.36■□□□□ 0.69
VIM-205ENST00000485947 BARHL2Q9NY43 387 aa19.36■□□□□ 0.69
VIM-205ENST00000485947 UMODL1Q5DID0 1318 aa19.35■□□□□ 0.69
VIM-205ENST00000485947 NAPAP54920 295 aa19.35■□□□□ 0.69
VIM-205ENST00000485947 CCL23P55773 120 aa19.35■□□□□ 0.69
VIM-205ENST00000485947 KIAA0753Q2KHM9 967 aa19.35■□□□□ 0.69
VIM-205ENST00000485947 KRT40Q6A162 431 aa19.35■□□□□ 0.69
VIM-205ENST00000485947 WWC2Q6AWC2 1192 aa19.35■□□□□ 0.69
VIM-205ENST00000485947 CCDC12Q8WUD4 166 aaPredicted RBP19.35■□□□□ 0.69
VIM-205ENST00000485947 C16orf70Q9BSU1 422 aa19.35■□□□□ 0.69
VIM-205ENST00000485947 PCDHA6Q9UN73 950 aa19.35■□□□□ 0.69
VIM-205ENST00000485947 PCDHA8Q9Y5H6 950 aa19.35■□□□□ 0.69
VIM-205ENST00000485947 IQCF3P0C7M6 154 aa19.34■□□□□ 0.69
VIM-205ENST00000485947 ACRP10323 421 aa19.34■□□□□ 0.69
VIM-205ENST00000485947 ACTN1P12814 892 aa19.34■□□□□ 0.69
VIM-205ENST00000485947 PTK7Q13308 1070 aa19.34■□□□□ 0.69
VIM-205ENST00000485947 AP3B2Q13367 1082 aa19.34■□□□□ 0.69
VIM-205ENST00000485947 AIFM3Q96NN9 605 aa19.34■□□□□ 0.69
VIM-205ENST00000485947 GBP4Q96PP9 640 aa19.34■□□□□ 0.69
VIM-205ENST00000485947 SEMA6BQ9H3T3 888 aa19.34■□□□□ 0.69
VIM-205ENST00000485947 RTEL1Q9NZ71 1219 aa19.34■□□□□ 0.69
VIM-205ENST00000485947 HDAC6Q9UBN7 1215 aa19.34■□□□□ 0.69
VIM-205ENST00000485947 UBIAD1Q9Y5Z9 338 aa19.34■□□□□ 0.69
VIM-205ENST00000485947 CDH23Q9H251 3354 aa19.33■□□□□ 0.69
VIM-205ENST00000485947 ESYT2A0FGR8 921 aa19.33■□□□□ 0.68
VIM-205ENST00000485947 H3BRB1 525 aa19.33■□□□□ 0.68
VIM-205ENST00000485947 ADCY7P51828 1080 aa19.33■□□□□ 0.68
VIM-205ENST00000485947 FOSBP53539 338 aa19.33■□□□□ 0.68
VIM-205ENST00000485947 SEMA3FQ13275 785 aa19.33■□□□□ 0.68
VIM-205ENST00000485947 RAB30Q15771 203 aa19.33■□□□□ 0.68
VIM-205ENST00000485947 GDF6Q6KF10 455 aaPredicted RBP19.33■□□□□ 0.68
VIM-205ENST00000485947 CCDC148Q8NFR7 591 aa19.33■□□□□ 0.68
VIM-205ENST00000485947 GPKOWQ92917 476 aaPredicted RBP eCLIP19.33■□□□□ 0.68
VIM-205ENST00000485947 TUT1Q9H6E5 874 aaKnown RBP19.33■□□□□ 0.68
VIM-205ENST00000485947 JADE2Q9NQC1 790 aa19.33■□□□□ 0.68
VIM-205ENST00000485947 ZNF215Q9UL58 517 aaPredicted RBP19.33■□□□□ 0.68
VIM-205ENST00000485947 hCG_1642624A0A1W2PR95 340 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 SMCO2A6NFE2 343 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 STXBP3O00186 592 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 MMP1P03956 469 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 LGALS2P05162 132 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 ZNF286BP0CG31 522 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 GNAT1P11488 350 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 SELPP16109 830 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 RESTQ13127 1097 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 SAFBQ15424 915 aaKnown RBP eCLIP19.32■□□□□ 0.68
VIM-205ENST00000485947 FOXD4L5Q5VV16 416 aaPredicted RBP19.32■□□□□ 0.68
VIM-205ENST00000485947 CYFIP1Q7L576 1253 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 FOXD4L4Q8WXT5 416 aaPredicted RBP19.32■□□□□ 0.68
VIM-205ENST00000485947 CTAGE1Q96RT6 745 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 GPR20Q99678 358 aa19.32■□□□□ 0.68
VIM-205ENST00000485947 CAND2O75155 1236 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 BAIAP3O94812 1187 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 ITGB5P18084 799 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 DNAJB2P25686 324 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 HOXC8P31273 242 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 CHMP4BP1P59074 171 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 GUCY1B3Q02153 619 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 MTMR1Q13613 665 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 UBE2SQ16763 222 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 BRAPQ7Z569 592 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 PHOSPHO2Q8TCD6 241 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 SCLYQ96I15 445 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 PHF20Q9BVI0 1012 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 BRMS1Q9HCU9 246 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 MSRAQ9UJ68 235 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 SLC4A7Q9Y6M7 1214 aa19.31■□□□□ 0.68
VIM-205ENST00000485947 KCNA2P16389 499 aa19.3■□□□□ 0.68
VIM-205ENST00000485947 GNA11P29992 359 aa19.3■□□□□ 0.68
VIM-205ENST00000485947 MCTP1Q6DN14 999 aa19.3■□□□□ 0.68
VIM-205ENST00000485947 GALNT17Q6IS24 598 aa19.3■□□□□ 0.68
VIM-205ENST00000485947 OTOP2Q7RTS6 562 aa19.3■□□□□ 0.68
VIM-205ENST00000485947 TIFAQ96CG3 184 aa19.3■□□□□ 0.68
VIM-205ENST00000485947 VWCEQ96DN2 955 aa19.3■□□□□ 0.68
VIM-205ENST00000485947 ZFP91Q96JP5 570 aaPredicted RBP19.3■□□□□ 0.68
VIM-205ENST00000485947 ZMYND12Q9H0C1 365 aa19.3■□□□□ 0.68
VIM-205ENST00000485947 VPS54Q9P1Q0 977 aa19.3■□□□□ 0.68
VIM-205ENST00000485947 C17orf102A2RUQ5 167 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 BAG4O95429 457 aaKnown RBP19.29■□□□□ 0.68
VIM-205ENST00000485947 SREBF1P36956 1147 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 CLK2P49760 499 aaKnown RBP19.29■□□□□ 0.68
VIM-205ENST00000485947 TYW1BQ6NUM6 668 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 LRRC8DQ7L1W4 858 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 NIPA1Q7RTP0 329 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 FERMT3Q86UX7 667 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 SERINC5Q86VE9 423 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 BICD2Q8TD16 824 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 SEPT1Q8WYJ6 367 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 FAM161BQ96MY7 647 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 MXRA8Q9BRK3 442 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 FOXP1Q9H334 677 aaPredicted RBP19.29■□□□□ 0.68
VIM-205ENST00000485947 C6orf50Q9HD87 102 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 GJB4Q9NTQ9 266 aa19.29■□□□□ 0.68
VIM-205ENST00000485947 EMSYQ7Z589 1322 aa19.28■□□□□ 0.68
VIM-205ENST00000485947 MYH7BA7E2Y1 1941 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms