RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 IGDCC4Q8TDY8 1250 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 WNT8BQ93098 351 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 BCAS3Q9H6U6 928 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 CLDND1Q9NY35 253 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 HDAC6Q9UBN7 1215 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 GTF2IRD1Q9UHL9 959 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 MUTYHQ9UIF7 546 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 USP34Q70CQ2 3546 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 PTPRZ1P23471 2315 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-215ENST00000485550 EFCAB14O75071 495 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 GGPS1O95749 300 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 ZNF200P98182 395 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-215ENST00000485550 SP2Q02086 613 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 GHRHRQ02643 423 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 RBL2Q08999 1139 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 GPM6BQ13491 265 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 COL9A3Q14050 684 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-215ENST00000485550 MBTPS1Q14703 1052 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 MFSD10Q14728 455 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 CLUL1Q15846 466 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 KIAA0753Q2KHM9 967 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 HSDL1Q3SXM5 330 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 MYSM1Q5VVJ2 828 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 SESTD1Q86VW0 696 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 RAB11FIP4Q86YS3 637 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 ADHFE1Q8IWW8 467 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 C7orf31Q8N865 590 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 PRSS33Q8NF86 280 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 PABPC5Q96DU9 382 aaKnown RBP12.22□□□□□ -0.45
HMGN1-215ENST00000485550 MFSD14AQ96MC6 490 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 SPATA33Q96N06 139 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 OCEL1Q9H607 264 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 MAP3K20Q9NYL2 800 aaKnown RBP12.22□□□□□ -0.45
HMGN1-215ENST00000485550 RTEL1Q9NZ71 1219 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-215ENST00000485550 FAM50BQ9Y247 325 aa12.22□□□□□ -0.45
HMGN1-215ENST00000485550 CACNA1HO95180 2353 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 KIAA1671Q9BY89 1806 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 CFAP54Q96N23 3096 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 PRC1O43663 620 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 LGR5O75473 907 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 RXRAP19793 462 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 CCND2P30279 289 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 HTRA4P83105 476 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-215ENST00000485550 CELF3Q5SZQ8 465 aaKnown RBP12.21□□□□□ -0.45
HMGN1-215ENST00000485550 TRAF7Q6Q0C0 670 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 CASC1Q6TDU7 716 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 NFXL1Q6ZNB6 911 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 ZNF654Q8IZM8 581 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 CMTR1Q8N1G2 835 aaKnown RBP12.21□□□□□ -0.45
HMGN1-215ENST00000485550 PPTC7Q8NI37 304 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 CTCFLQ8NI51 663 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-215ENST00000485550 EMID1Q96A84 441 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-215ENST00000485550 LSG1Q9H089 658 aaKnown RBP12.21□□□□□ -0.45
HMGN1-215ENST00000485550 NSUN3Q9H649 340 aaKnown RBP12.21□□□□□ -0.45
HMGN1-215ENST00000485550 MLXIPQ9HAP2 919 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 LY9Q9HBG7 655 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 PRKAG3Q9UGI9 489 aa12.21□□□□□ -0.45
HMGN1-215ENST00000485550 LOXHD1Q8IVV2 1947 aa12.21□□□□□ -0.46
HMGN1-215ENST00000485550 H3BNC9 293 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 PPFIA4O75335 1185 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 UPP2O95045 317 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 PLEKHA8P1O95397 391 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 AMHP03971 560 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 UBA1P22314 1058 aaKnown RBP12.2□□□□□ -0.46
HMGN1-215ENST00000485550 TRAF1Q13077 416 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 PTK7Q13308 1070 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 HIC1Q14526 733 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 TRIM71Q2Q1W2 868 aaKnown RBP12.2□□□□□ -0.46
HMGN1-215ENST00000485550 USP17L6PQ6QN14 398 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 RPAINQ86UA6 219 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 CCDC82Q8N4S0 544 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 SAMD3Q8N6K7 520 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 DBF4BQ8NFT6 615 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 RRP36Q96EU6 259 aaKnown RBP12.2□□□□□ -0.46
HMGN1-215ENST00000485550 LRRC2Q9BYS8 371 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 UPF3BQ9BZI7 483 aaKnown RBP12.2□□□□□ -0.46
HMGN1-215ENST00000485550 MYO10Q9HD67 2058 aa12.2□□□□□ -0.46
HMGN1-215ENST00000485550 PLXNA3P51805 1871 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 hCG_1642624A0A1W2PR95 340 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 CCDC69A6NI79 296 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 HAS3O00219 553 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 SLC27A2O14975 620 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 CSPG5O95196 566 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 F2P00734 622 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 MCM5P33992 734 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 LTBRP36941 435 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 MRPS9P82933 396 aaKnown RBP12.19□□□□□ -0.46
HMGN1-215ENST00000485550 DLX2Q07687 328 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-215ENST00000485550 KCNV1Q6PIU1 500 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 RNF135Q8IUD6 432 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 TMEM192Q8IY95 271 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 SRBD1Q8N5C6 995 aaKnown RBP12.19□□□□□ -0.46
HMGN1-215ENST00000485550 SMARCC2Q8TAQ2 1214 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 SAMD11Q96NU1 681 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 YME1L1Q96TA2 773 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 KATNAL1Q9BW62 490 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 ANO2Q9NQ90 1003 aa12.19□□□□□ -0.46
HMGN1-215ENST00000485550 ZFHX2Q9C0A1 2572 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms