RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 BRD1O95696 1058 aa13.86□□□□□ -0.19
TRA2B-213ENST00000485530 CCNE2O96020 404 aa13.86□□□□□ -0.19
TRA2B-213ENST00000485530 GH1P01241 217 aa13.86□□□□□ -0.19
TRA2B-213ENST00000485530 ZSCAN22P10073 491 aaPredicted RBP13.86□□□□□ -0.19
TRA2B-213ENST00000485530 MCM7P33993 719 aa13.86□□□□□ -0.19
TRA2B-213ENST00000485530 ANP32AP39687 249 aaKnown RBP13.86□□□□□ -0.19
TRA2B-213ENST00000485530 GNL2Q13823 731 aaKnown RBP13.86□□□□□ -0.19
TRA2B-213ENST00000485530 SNX17Q15036 470 aa13.86□□□□□ -0.19
TRA2B-213ENST00000485530 DHX37Q8IY37 1157 aaKnown RBP13.86□□□□□ -0.19
TRA2B-213ENST00000485530 EMID1Q96A84 441 aaPredicted RBP13.86□□□□□ -0.19
TRA2B-213ENST00000485530 CHAMP1Q96JM3 812 aa13.86□□□□□ -0.19
TRA2B-213ENST00000485530 MTMR9Q96QG7 549 aa13.86□□□□□ -0.19
TRA2B-213ENST00000485530 ZNF577Q9BSK1 485 aa13.86□□□□□ -0.19
TRA2B-213ENST00000485530 PDLIM7Q9NR12 457 aa13.86□□□□□ -0.19
TRA2B-213ENST00000485530 GSTTP1A0A1W2PQM5 241 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 NKRFO15226 690 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRA2B-213ENST00000485530 PSMD10O75832 226 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 TRAPPC10P48553 1259 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 LAMC2Q13753 1193 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 KCNA10Q16322 511 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 IL17AQ16552 155 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 TRIM60Q495X7 471 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 TTC38Q5R3I4 469 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 B3GNT9Q6UX72 402 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 SLC39A5Q6ZMH5 540 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 OR6J1Q8NGC5 347 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 CDHR1Q96JP9 859 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 FTOQ9C0B1 505 aaKnown RBP eCLIP13.85□□□□□ -0.194e-15■□□□□ 8.7
TRA2B-213ENST00000485530 AP5M1Q9H0R1 490 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.85□□□□□ -0.19
TRA2B-213ENST00000485530 KIAA1217Q5T5P2 1943 aa13.85□□□□□ -0.19
TRA2B-213ENST00000485530 TRIM43BA6NCK2 446 aa13.84□□□□□ -0.19
TRA2B-213ENST00000485530 C6orf222P0C671 652 aaPredicted RBP13.84□□□□□ -0.19
TRA2B-213ENST00000485530 GCFC2P16383 781 aaKnown RBP13.84□□□□□ -0.19
TRA2B-213ENST00000485530 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
TRA2B-213ENST00000485530 NEDD9Q14511 834 aa13.84□□□□□ -0.19
TRA2B-213ENST00000485530 FSCN1Q16658 493 aaKnown RBP13.84□□□□□ -0.19
TRA2B-213ENST00000485530 METTL7BQ6UX53 244 aa13.84□□□□□ -0.19
TRA2B-213ENST00000485530 BRAPQ7Z569 592 aa13.84□□□□□ -0.19
TRA2B-213ENST00000485530 SH3RF1Q7Z6J0 888 aa13.84□□□□□ -0.19
TRA2B-213ENST00000485530 TRIM43Q96BQ3 446 aaPredicted RBP13.84□□□□□ -0.19
TRA2B-213ENST00000485530 SPATA33Q96N06 139 aa13.84□□□□□ -0.19
TRA2B-213ENST00000485530 PCYT2Q99447 389 aa13.84□□□□□ -0.19
TRA2B-213ENST00000485530 GPR20Q99678 358 aa13.84□□□□□ -0.19
TRA2B-213ENST00000485530 MLXIPQ9HAP2 919 aa13.84□□□□□ -0.19
TRA2B-213ENST00000485530 CLIC4Q9Y696 253 aa13.84□□□□□ -0.19
TRA2B-213ENST00000485530 NFASCO94856 1347 aa13.84□□□□□ -0.19
TRA2B-213ENST00000485530 KBTBD13C9JR72 458 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 DDX39AO00148 427 aaKnown RBP13.83□□□□□ -0.2
TRA2B-213ENST00000485530 ATG7O95352 703 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 F13A1P00488 732 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
TRA2B-213ENST00000485530 MMP3P08254 477 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 HOXD8P13378 290 aaPredicted RBP13.83□□□□□ -0.2
TRA2B-213ENST00000485530 PLA2G5P39877 138 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 SETQ01105 290 aaPredicted RBP13.83□□□□□ -0.2
TRA2B-213ENST00000485530 SP4Q02446 784 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 SPIRE1Q08AE8 756 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 PTGDRQ13258 359 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 GRIN2CQ14957 1233 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 RILPL1Q5EBL4 403 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 ARRDC4Q8NCT1 418 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 PPTC7Q8NI37 304 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 KAT2BQ92831 832 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 RNPC3Q96LT9 517 aaKnown RBP13.83□□□□□ -0.2
TRA2B-213ENST00000485530 RIT2Q99578 217 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 ZSCAN16Q9H4T2 348 aaPredicted RBP13.83□□□□□ -0.2
TRA2B-213ENST00000485530 TFIP11Q9UBB9 837 aaKnown RBP13.83□□□□□ -0.2
TRA2B-213ENST00000485530 VAV3Q9UKW4 847 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 GRIN2DO15399 1336 aa13.83□□□□□ -0.2
TRA2B-213ENST00000485530 EML1O00423 815 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 PPFIA4O75335 1185 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 ASGR1P07306 291 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 ACLYP53396 1101 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 ACTR2P61160 394 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 PURAQ00577 322 aaKnown RBP13.82□□□□□ -0.2
TRA2B-213ENST00000485530 PTPAQ15257 358 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 FOXD4L6Q3SYB3 417 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-213ENST00000485530 CXCL17Q6UXB2 119 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 ABHD15Q6UXT9 468 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 FOXD4L3Q6VB84 417 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-213ENST00000485530 RNF180Q86T96 592 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 GIMAP8Q8ND71 665 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-213ENST00000485530 PPP1R13LQ8WUF5 828 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 FERMT2Q96AC1 680 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 FAM20AQ96MK3 541 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 NAP1L4Q99733 375 aaKnown RBP13.82□□□□□ -0.2
TRA2B-213ENST00000485530 C16orf70Q9BSU1 422 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 UNC45AQ9H3U1 944 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 JPH1Q9HDC5 661 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-213ENST00000485530 TBC1D22BQ9NU19 505 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 SLC9A2Q9UBY0 812 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-213ENST00000485530 NOL7Q9UMY1 257 aaKnown RBP13.82□□□□□ -0.2
TRA2B-213ENST00000485530 PHF24Q9UPV7 400 aa13.82□□□□□ -0.2
TRA2B-213ENST00000485530 IGKV6D-21A0A0A0MT36 114 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 TBX3O15119 743 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 NEMFO60524 1076 aa13.81□□□□□ -0.2
TRA2B-213ENST00000485530 PDIA4P13667 645 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 1253.7 ms