RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 GRM4Q14833 912 aa17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 VSIG10LQ86VR7 867 aa17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 MTMR8Q96EF0 704 aa17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 POP1Q99575 1024 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 MLXIPQ9HAP2 919 aa17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 SETD4Q9NVD3 440 aa17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 COL4A6Q14031 1691 aa17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 STXBP3O00186 592 aa17.72■□□□□ 0.43
HLA-DQB1-208ENST00000484729 LGALS2P05162 132 aa17.72■□□□□ 0.43
HLA-DQB1-208ENST00000484729 BMPR1AP36894 532 aa17.72■□□□□ 0.43
HLA-DQB1-208ENST00000484729 WTAPQ15007 396 aa17.72■□□□□ 0.43
HLA-DQB1-208ENST00000484729 SART3Q15020 963 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-208ENST00000484729 PGM5Q15124 567 aa17.72■□□□□ 0.43
HLA-DQB1-208ENST00000484729 NCOA7Q8NI08 942 aa17.72■□□□□ 0.43
HLA-DQB1-208ENST00000484729 EDAQ92838 391 aa17.72■□□□□ 0.43
HLA-DQB1-208ENST00000484729 PIGSQ96S52 555 aa17.72■□□□□ 0.43
HLA-DQB1-208ENST00000484729 SENP2Q9HC62 589 aa17.72■□□□□ 0.43
HLA-DQB1-208ENST00000484729 TAF6LQ9Y6J9 622 aa17.72■□□□□ 0.43
HLA-DQB1-208ENST00000484729 RALGAPA2Q2PPJ7 1873 aa17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 MYH6P13533 1939 aa17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 C5orf67F2Z3F1 127 aa17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 GHRHRQ02643 423 aa17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 TRAF1Q13077 416 aa17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 SMAD4Q13485 552 aaKnown RBP17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 SLC35G1Q2M3R5 365 aa17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 KCNV1Q6PIU1 500 aa17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 STOX1Q6ZVD7 989 aa17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 C11orf84Q9BUA3 381 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 MAP3K20Q9NYL2 800 aaKnown RBP17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 CD207Q9UJ71 328 aa17.71■□□□□ 0.43
HLA-DQB1-208ENST00000484729 E7EWF7 191 aa17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 GCOM1H8Y6P7 765 aaPredicted RBP17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 SGSM2O43147 1006 aa17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 RB1P06400 928 aa17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 POLR2MP0CAP2 368 aa17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 FCHSD1Q86WN1 690 aa17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 TRIM50Q86XT4 487 aa17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 APBB2Q92870 758 aa17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 PBXIP1Q96AQ6 731 aa17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 LMAN2LQ9H0V9 348 aa17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 RIOX1Q9H6W3 641 aa17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ALG13Q9NP73 1137 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 TELO2Q9Y4R8 837 aa17.7■□□□□ 0.42
HLA-DQB1-208ENST00000484729 USP34Q70CQ2 3546 aa17.69■□□□□ 0.42
HLA-DQB1-208ENST00000484729 TMEM221A6NGB7 291 aa17.69■□□□□ 0.42
HLA-DQB1-208ENST00000484729 M0R296 226 aa17.69■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CAND2O75155 1236 aa17.69■□□□□ 0.42
HLA-DQB1-208ENST00000484729 TGFB3P10600 412 aa17.69■□□□□ 0.42
HLA-DQB1-208ENST00000484729 TRIM67Q6ZTA4 783 aa17.69■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CATIPQ7Z7H3 387 aa17.69■□□□□ 0.42
HLA-DQB1-208ENST00000484729 SAMD3Q8N6K7 520 aa17.69■□□□□ 0.42
HLA-DQB1-208ENST00000484729 PIBF1Q8WXW3 757 aa17.69■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ZFHX2Q9C0A1 2572 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ADGRA3Q8IWK6 1321 aa17.69■□□□□ 0.42
HLA-DQB1-208ENST00000484729 NOP56O00567 594 aaKnown RBP17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CYTH3O43739 400 aa17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CHRNA1P02708 482 aa17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 GHRP10912 638 aa17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CCND2P30279 289 aa17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 PTPN5P54829 565 aa17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ARHGAP4P98171 946 aa17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 TROAPQ12815 778 aa17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ADAM15Q13444 863 aa17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CAMK1Q14012 370 aa17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 FAM26DQ5JW98 314 aa17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 BMP8AQ7Z5Y6 402 aa17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 RBM8AQ9Y5S9 174 aaKnown RBP17.68■□□□□ 0.42
HLA-DQB1-208ENST00000484729 PNMA6FA0A0J9YX94 578 aa17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 GNAT1P11488 350 aa17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 NDUFV1P49821 464 aa17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ANTXR2P58335 489 aa17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 TCF15Q12870 199 aa17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 BTG3Q14201 252 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 UTP14CQ5TAP6 766 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CYFIP1Q7L576 1253 aa17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 MB21D2Q8IYB1 491 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CLP1Q92989 425 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 USP26Q9BXU7 913 aa17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 RC3H2Q9HBD1 1191 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 FAM86C1Q9NVL1 165 aa17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 PLAGL2Q9UPG8 496 aa17.67■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CFAP54Q96N23 3096 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ENPP3O14638 875 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 MMP1P03956 469 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 DNAJB1P25685 340 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ADAM17P78536 824 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 RUFY4Q6ZNE9 571 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ADGRD2Q7Z7M1 963 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 LMBR1Q8WVP7 490 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 MAP4K1Q92918 833 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 MSLNLQ96KJ4 702 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 GPR20Q99678 358 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 MYL10Q9BUA6 226 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 CLEC1BQ9P126 229 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 RWDD3Q9Y3V2 267 aa17.66■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ZDBF2Q9HCK1 2354 aa17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ST18O60284 1047 aa17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 ZXDAP98168 799 aa17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 SP4Q02446 784 aa17.65■□□□□ 0.42
HLA-DQB1-208ENST00000484729 SEMA3FQ13275 785 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms