RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CCDC173Q0VFZ6 552 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 SLC39A14Q15043 492 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 PFKFB3Q16875 520 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-216ENST00000484087 LY6KQ17RY6 165 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 UVSSAQ2YD98 709 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 ARHGEF16Q5VV41 709 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 SASS6Q6UVJ0 657 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 RNF180Q86T96 592 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 MSL3Q8N5Y2 521 aaKnown RBP7.86□□□□□ -1.15
BRCA1-216ENST00000484087 FSIP1Q8NA03 581 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 ARRDC4Q8NCT1 418 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 KLHDC9Q8NEP7 349 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 CCDC148Q8NFR7 591 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 MORC4Q8TE76 937 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 CCDC12Q8WUD4 166 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-216ENST00000484087 TRIM44Q96DX7 344 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-216ENST00000484087 RMDN3Q96TC7 470 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 WDR11Q9BZH6 1224 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 CLSTN2Q9H4D0 955 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 SH3GLB2Q9NR46 395 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 PXMP2Q9NR77 195 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 NRBP1Q9UHY1 535 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 KCNJ14Q9UNX9 436 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 LHX6Q9UPM6 363 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 PHF24Q9UPV7 400 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 MRPL11Q9Y3B7 192 aaKnown RBP7.86□□□□□ -1.15
BRCA1-216ENST00000484087 CLIC4Q9Y696 253 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 PNMA6FA0A0J9YX94 578 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 TRIM43BA6NCK2 446 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 NR1I2O75469 434 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 RGS20O76081 388 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 CAVIN2O95810 425 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 SMARCA1P28370 1054 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 GJA9P57773 515 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 TLE2Q04725 743 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 ZRSR1Q15695 479 aaKnown RBP7.85□□□□□ -1.15
BRCA1-216ENST00000484087 HABP4Q5JVS0 413 aaKnown RBP7.85□□□□□ -1.15
BRCA1-216ENST00000484087 GNASQ5JWF2 1037 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 WWC2Q6AWC2 1192 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 GALNT17Q6IS24 598 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 HEATR3Q7Z4Q2 680 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 OR6J1Q8NGC5 347 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 TRIM43Q96BQ3 446 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-216ENST00000484087 RRP36Q96EU6 259 aaKnown RBP7.85□□□□□ -1.15
BRCA1-216ENST00000484087 PHF20Q9BVI0 1012 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 SPZ1Q9BXG8 430 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 FTOQ9C0B1 505 aaKnown RBP eCLIP7.85□□□□□ -1.15
BRCA1-216ENST00000484087 UPF3AQ9H1J1 476 aaKnown RBP7.85□□□□□ -1.15
BRCA1-216ENST00000484087 RBSNQ9H1K0 784 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 VTA1Q9NP79 307 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 STARD7Q9NQZ5 370 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 PDLIM7Q9NR12 457 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 VPS54Q9P1Q0 977 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 HCSTQ9UBK5 93 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 ADD3Q9UEY8 706 aaKnown RBP7.85□□□□□ -1.15
BRCA1-216ENST00000484087 SEC63Q9UGP8 760 aaKnown RBP7.85□□□□□ -1.15
BRCA1-216ENST00000484087 PCDHA7Q9UN72 937 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 PCDHGA4Q9Y5G9 962 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 NR2E3Q9Y5X4 410 aa7.85□□□□□ -1.15
BRCA1-216ENST00000484087 GRIN2DO15399 1336 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 UMODL1Q5DID0 1318 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 SCN10AQ9Y5Y9 1956 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 SOX1O00570 391 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-216ENST00000484087 CUTAO60888 179 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 MYL3P08590 195 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 TXNP10599 105 aaKnown RBP7.84□□□□□ -1.15
BRCA1-216ENST00000484087 CMA1P23946 247 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 FUT2Q10981 343 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 SNX17Q15036 470 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 PGM5Q15124 567 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 PKN1Q16512 942 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 CAMK4Q16566 473 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 FSCN1Q16658 493 aaKnown RBP7.84□□□□□ -1.15
BRCA1-216ENST00000484087 DUSP28Q4G0W2 176 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 TMC2Q8TDI7 906 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 VTI1AQ96AJ9 217 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 CCDC34Q96HJ3 373 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 UIMC1Q96RL1 719 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 SDF4Q9BRK5 362 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 PDCD2LQ9BRP1 358 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 PRO3102Q9H379 93 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.84□□□□□ -1.15
BRCA1-216ENST00000484087 TMEM260Q9NX78 707 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 FAM13BQ9NYF5 915 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 PKD2L1Q9P0L9 805 aa7.84□□□□□ -1.15
BRCA1-216ENST00000484087 HOOK1Q9UJC3 728 aaKnown RBP7.84□□□□□ -1.15
BRCA1-216ENST00000484087 GBF1Q92538 1859 aa7.84□□□□□ -1.16
BRCA1-216ENST00000484087 TANC1Q9C0D5 1861 aa7.84□□□□□ -1.16
BRCA1-216ENST00000484087 TRIP12Q14669 1992 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-216ENST00000484087 COL6A3P12111 3177 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 GCOM1H8Y6P7 765 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-216ENST00000484087 hCG_1984214I3L0E3 225 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 MEIS2O14770 477 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 NR3C2P08235 984 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 POLR2MP0CAP2 368 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 ZNF286BP0CG31 522 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 CST5P28325 142 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-216ENST00000484087 MLLT3P42568 568 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-216ENST00000484087 TRAPPC10P48553 1259 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 MRPS9P82933 396 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms