RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 CSPP1Q1MSJ5 1256 aa14.95□□□□□ -0.02
UBR4-213ENST00000483922 RTN4RL1Q86UN2 441 aaPredicted RBP14.95□□□□□ -0.02
UBR4-213ENST00000483922 HOMER1Q86YM7 354 aa14.95□□□□□ -0.02
UBR4-213ENST00000483922 SAMD3Q8N6K7 520 aa14.95□□□□□ -0.02
UBR4-213ENST00000483922 CLP1Q92989 425 aaKnown RBP14.95□□□□□ -0.02
UBR4-213ENST00000483922 INPP4AQ96PE3 977 aaPredicted RBP14.95□□□□□ -0.02
UBR4-213ENST00000483922 DSCC1Q9BVC3 393 aa14.95□□□□□ -0.02
UBR4-213ENST00000483922 USP26Q9BXU7 913 aa14.95□□□□□ -0.02
UBR4-213ENST00000483922 TAF6LQ9Y6J9 622 aa14.95□□□□□ -0.02
UBR4-213ENST00000483922 ATP9AO75110 1047 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 CAND2O75155 1236 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 GHRP10912 638 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 CTNNB1P35222 781 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 NT5C2P49902 561 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 RRP1P56182 461 aaKnown RBP14.94□□□□□ -0.02
UBR4-213ENST00000483922 ADAM15Q13444 863 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 HERC4Q5GLZ8 1057 aaPredicted RBP14.94□□□□□ -0.02
UBR4-213ENST00000483922 MARCH8Q5T0T0 291 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 IFIT1BQ5T764 474 aaKnown RBP14.94□□□□□ -0.02
UBR4-213ENST00000483922 IER5LQ5T953 404 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 UTP14CQ5TAP6 766 aaKnown RBP14.94□□□□□ -0.02
UBR4-213ENST00000483922 B4GALNT3Q6L9W6 998 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 METTL7BQ6UX53 244 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 RNF135Q8IUD6 432 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 SMC5Q8IY18 1101 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 FIBCD1Q8N539 461 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 LINC01599Q8WXQ3 324 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 ZBTB10Q96DT7 871 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 MSLNLQ96KJ4 702 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 OSBPL3Q9H4L5 887 aa14.94□□□□□ -0.02
UBR4-213ENST00000483922 ALG13Q9NP73 1137 aaKnown RBP14.94□□□□□ -0.02
UBR4-213ENST00000483922 RALGAPA2Q2PPJ7 1873 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 TECTAO75443 2155 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 CSPG5O95196 566 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 IGHDP01880 384 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 RB1P06400 928 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 MFAP1P55081 439 aaKnown RBP14.93□□□□□ -0.02
UBR4-213ENST00000483922 ARHGAP4P98171 946 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 GRM4Q14833 912 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 ADGRD2Q7Z7M1 963 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 PRSS33Q8NF86 280 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 APBB2Q92870 758 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 KRT23Q9C075 422 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 IGFLR1Q9H665 355 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 AGO3Q9H9G7 860 aaKnown RBP14.93□□□□□ -0.02
UBR4-213ENST00000483922 CLEC1BQ9P126 229 aa14.93□□□□□ -0.02
UBR4-213ENST00000483922 BAZ2BQ9UIF8 2168 aaKnown RBP14.92□□□□□ -0.02
UBR4-213ENST00000483922 DGKIO75912 1065 aa14.92□□□□□ -0.02
UBR4-213ENST00000483922 TROAPQ12815 778 aa14.92□□□□□ -0.02
UBR4-213ENST00000483922 NEDD9Q14511 834 aa14.92□□□□□ -0.02
UBR4-213ENST00000483922 IMMTQ16891 758 aaKnown RBP14.92□□□□□ -0.02
UBR4-213ENST00000483922 USP17L6PQ6QN14 398 aa14.92□□□□□ -0.02
UBR4-213ENST00000483922 UBAC1Q9BSL1 405 aa14.92□□□□□ -0.02
UBR4-213ENST00000483922 LMAN2LQ9H0V9 348 aa14.92□□□□□ -0.02
UBR4-213ENST00000483922 KCNH6Q9H252 994 aa14.92□□□□□ -0.02
UBR4-213ENST00000483922 ZBTB47Q9UFB7 747 aaPredicted RBP14.92□□□□□ -0.02
UBR4-213ENST00000483922 PLAGL2Q9UPG8 496 aa14.92□□□□□ -0.02
UBR4-213ENST00000483922 ADGRA3Q8IWK6 1321 aa14.92□□□□□ -0.02
UBR4-213ENST00000483922 PNMA6FA0A0J9YX94 578 aa14.91□□□□□ -0.02
UBR4-213ENST00000483922 GSTTP1A0A1W2PQM5 241 aa14.91□□□□□ -0.02
UBR4-213ENST00000483922 NOP56O00567 594 aaKnown RBP14.91□□□□□ -0.02
UBR4-213ENST00000483922 SP4Q02446 784 aa14.91□□□□□ -0.02
UBR4-213ENST00000483922 CHD1LQ86WJ1 897 aa14.91□□□□□ -0.02
UBR4-213ENST00000483922 SPPL3Q8TCT6 385 aa14.91□□□□□ -0.02
UBR4-213ENST00000483922 EDAQ92838 391 aa14.91□□□□□ -0.02
UBR4-213ENST00000483922 CFAP54Q96N23 3096 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 STXBP3O00186 592 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 MEIS2O14770 477 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 FIBPO43427 364 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 NCK2O43639 380 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 EYA4O95677 639 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 MMP1P03956 469 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 ITGB1P05556 798 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 GNAT1P11488 350 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 GNPTABQ3T906 1256 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 FBXO47Q5MNV8 452 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 DNAJB3Q8WWF6 145 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 PIBF1Q8WXW3 757 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 SENP7Q9BQF6 1050 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 C11orf84Q9BUA3 381 aaPredicted RBP14.9□□□□□ -0.02
UBR4-213ENST00000483922 UPF3BQ9BZI7 483 aaKnown RBP14.9□□□□□ -0.02
UBR4-213ENST00000483922 FAM50BQ9Y247 325 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 PCDHGC5Q9Y5F6 944 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 MRPL42Q9Y6G3 142 aaKnown RBP14.9□□□□□ -0.02
UBR4-213ENST00000483922 NRCAMQ92823 1304 aa14.9□□□□□ -0.02
UBR4-213ENST00000483922 TTC3P53804 2025 aa14.89□□□□□ -0.03
UBR4-213ENST00000483922 MBLAC1A4D2B0 266 aaPredicted RBP14.89□□□□□ -0.03
UBR4-213ENST00000483922 STAM2O75886 525 aa14.89□□□□□ -0.03
UBR4-213ENST00000483922 CYP21A2P08686 494 aa14.89□□□□□ -0.03
UBR4-213ENST00000483922 KCNA2P16389 499 aa14.89□□□□□ -0.03
UBR4-213ENST00000483922 TCF7P36402 384 aaPredicted RBP14.89□□□□□ -0.03
UBR4-213ENST00000483922 GATMP50440 423 aa14.89□□□□□ -0.03
UBR4-213ENST00000483922 RBM10P98175 930 aaKnown RBP14.89□□□□□ -0.03
UBR4-213ENST00000483922 NUCB1Q02818 461 aa14.89□□□□□ -0.03
UBR4-213ENST00000483922 SMAD4Q13485 552 aaKnown RBP14.89□□□□□ -0.03
UBR4-213ENST00000483922 COL9A3Q14050 684 aaPredicted RBP14.89□□□□□ -0.03
UBR4-213ENST00000483922 BTG3Q14201 252 aaPredicted RBP14.89□□□□□ -0.03
UBR4-213ENST00000483922 BMP8AQ7Z5Y6 402 aa14.89□□□□□ -0.03
UBR4-213ENST00000483922 PCYT2Q99447 389 aa14.89□□□□□ -0.03
UBR4-213ENST00000483922 CNNM2Q9H8M5 875 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms