RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 ADCY7P51828 1080 aa22.71■■□□□ 1.23
HPS4-213ENST00000483631 TAP1Q03518 808 aa22.71■■□□□ 1.23
HPS4-213ENST00000483631 TYW1BQ6NUM6 668 aa22.71■■□□□ 1.23
HPS4-213ENST00000483631 RPAINQ86UA6 219 aa22.71■■□□□ 1.23
HPS4-213ENST00000483631 TRIM50Q86XT4 487 aa22.71■■□□□ 1.23
HPS4-213ENST00000483631 MXRA8Q9BRK3 442 aa22.71■■□□□ 1.23
HPS4-213ENST00000483631 AGXT2Q9BYV1 514 aa22.71■■□□□ 1.23
HPS4-213ENST00000483631 SETD4Q9NVD3 440 aa22.71■■□□□ 1.23
HPS4-213ENST00000483631 ERAP1Q9NZ08 941 aa22.71■■□□□ 1.23
HPS4-213ENST00000483631 PRRC2BQ5JSZ5 2229 aaKnown RBP22.7■■□□□ 1.23
HPS4-213ENST00000483631 GSTTP1A0A1W2PQM5 241 aa22.7■■□□□ 1.22
HPS4-213ENST00000483631 GJB5O95377 273 aa22.7■■□□□ 1.22
HPS4-213ENST00000483631 CDC27P30260 824 aa22.7■■□□□ 1.22
HPS4-213ENST00000483631 METAP2P50579 478 aaKnown RBP eCLIP22.7■■□□□ 1.22
HPS4-213ENST00000483631 MKRN4PQ13434 485 aaPredicted RBP22.7■■□□□ 1.22
HPS4-213ENST00000483631 PLEKHG4Q58EX7 1191 aa22.7■■□□□ 1.22
HPS4-213ENST00000483631 UTP14CQ5TAP6 766 aaKnown RBP22.7■■□□□ 1.22
HPS4-213ENST00000483631 TAF2Q6P1X5 1199 aa22.7■■□□□ 1.22
HPS4-213ENST00000483631 BLOC1S2Q6QNY1 142 aa22.7■■□□□ 1.22
HPS4-213ENST00000483631 SMARCAD1Q9H4L7 1026 aa22.7■■□□□ 1.22
HPS4-213ENST00000483631 SNX14Q9Y5W7 946 aa22.7■■□□□ 1.22
HPS4-213ENST00000483631 NFASCO94856 1347 aa22.7■■□□□ 1.22
HPS4-213ENST00000483631 TRANK1O15050 2925 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 ESYT2A0FGR8 921 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 SMCO2A6NFE2 343 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 RPLP2P05387 115 aaKnown RBP22.69■■□□□ 1.22
HPS4-213ENST00000483631 PSMA5P28066 241 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 CLK2P49760 499 aaKnown RBP22.69■■□□□ 1.22
HPS4-213ENST00000483631 DEFB103AP81534 67 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 SP4Q02446 784 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 PFKFB3Q16875 520 aaPredicted RBP22.69■■□□□ 1.22
HPS4-213ENST00000483631 FAM26DQ5JW98 314 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 MCTP2Q6DN12 878 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 LMBR1Q8WVP7 490 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 ATXN2LQ8WWM7 1075 aaKnown RBP22.69■■□□□ 1.22
HPS4-213ENST00000483631 JAKMIP1Q96N16 626 aaKnown RBP22.69■■□□□ 1.22
HPS4-213ENST00000483631 RAD9AQ99638 391 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 ANO3Q9BYT9 981 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 JPH1Q9HDC5 661 aaPredicted RBP22.69■■□□□ 1.22
HPS4-213ENST00000483631 KCNH7Q9NS40 1196 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 TELO2Q9Y4R8 837 aa22.69■■□□□ 1.22
HPS4-213ENST00000483631 GTPBP6O43824 516 aaPredicted RBP22.68■■□□□ 1.22
HPS4-213ENST00000483631 SREBF1P36956 1147 aa22.68■■□□□ 1.22
HPS4-213ENST00000483631 ARHGAP4P98171 946 aa22.68■■□□□ 1.22
HPS4-213ENST00000483631 TCTN1Q2MV58 587 aa22.68■■□□□ 1.22
HPS4-213ENST00000483631 CEP55Q53EZ4 464 aa22.68■■□□□ 1.22
HPS4-213ENST00000483631 TJAP1Q5JTD0 557 aa22.68■■□□□ 1.22
HPS4-213ENST00000483631 Q6ZUG5 572 aa22.68■■□□□ 1.22
HPS4-213ENST00000483631 NIPA1Q7RTP0 329 aa22.68■■□□□ 1.22
HPS4-213ENST00000483631 DBF4BQ8NFT6 615 aa22.68■■□□□ 1.22
HPS4-213ENST00000483631 CCDC12Q8WUD4 166 aaPredicted RBP22.68■■□□□ 1.22
HPS4-213ENST00000483631 TNPO1Q92973 898 aaKnown RBP22.68■■□□□ 1.22
HPS4-213ENST00000483631 ZBED2Q9BTP6 218 aa22.68■■□□□ 1.22
HPS4-213ENST00000483631 NCOR1O75376 2440 aa22.68■■□□□ 1.22
HPS4-213ENST00000483631 SCG2P13521 617 aa22.67■■□□□ 1.22
HPS4-213ENST00000483631 RPS6KB1P23443 525 aa22.67■■□□□ 1.22
HPS4-213ENST00000483631 ADD1P35611 737 aaKnown RBP22.67■■□□□ 1.22
HPS4-213ENST00000483631 SEPT8Q92599 483 aa22.67■■□□□ 1.22
HPS4-213ENST00000483631 APBB2Q92870 758 aa22.67■■□□□ 1.22
HPS4-213ENST00000483631 BRF1Q92994 677 aa22.67■■□□□ 1.22
HPS4-213ENST00000483631 TSPYL2Q9H2G4 693 aaPredicted RBP22.67■■□□□ 1.22
HPS4-213ENST00000483631 THEGQ9P2T0 379 aa22.67■■□□□ 1.22
HPS4-213ENST00000483631 SLC9A2Q9UBY0 812 aa22.67■■□□□ 1.22
HPS4-213ENST00000483631 MBLAC1A4D2B0 266 aaPredicted RBP22.66■■□□□ 1.22
HPS4-213ENST00000483631 MEIS1O00470 390 aa22.66■■□□□ 1.22
HPS4-213ENST00000483631 AMHP03971 560 aa22.66■■□□□ 1.22
HPS4-213ENST00000483631 EVCP57679 992 aa22.66■■□□□ 1.22
HPS4-213ENST00000483631 APOBRQ0VD83 1088 aa22.66■■□□□ 1.22
HPS4-213ENST00000483631 PPFIA1Q13136 1202 aa22.66■■□□□ 1.22
HPS4-213ENST00000483631 GLG1Q92896 1179 aa22.66■■□□□ 1.22
HPS4-213ENST00000483631 SDF4Q9BRK5 362 aa22.66■■□□□ 1.22
HPS4-213ENST00000483631 RRN3P2A6NIE6 340 aa22.65■■□□□ 1.22
HPS4-213ENST00000483631 PRPF3O43395 683 aaKnown RBP22.65■■□□□ 1.22
HPS4-213ENST00000483631 RSPH3Q86UC2 560 aa22.65■■□□□ 1.22
HPS4-213ENST00000483631 PPM1EQ8WY54 764 aa22.65■■□□□ 1.22
HPS4-213ENST00000483631 ZMYND12Q9H0C1 365 aa22.65■■□□□ 1.22
HPS4-213ENST00000483631 AZI2Q9H6S1 392 aa22.65■■□□□ 1.22
HPS4-213ENST00000483631 LMCD1Q9NZU5 365 aa22.65■■□□□ 1.22
HPS4-213ENST00000483631 NAP1L2Q9ULW6 460 aaPredicted RBP22.65■■□□□ 1.22
HPS4-213ENST00000483631 INSL6Q9Y581 213 aa22.65■■□□□ 1.22
HPS4-213ENST00000483631 MTCH2Q9Y6C9 303 aa22.65■■□□□ 1.22
HPS4-213ENST00000483631 SIP14410 1827 aa22.65■■□□□ 1.22
HPS4-213ENST00000483631 VCANP13611 3396 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 ARHGEF15O94989 841 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 CYP3A4P08684 503 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 CPA1P15085 419 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 GRIK4Q16099 956 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 PLPPR4Q7Z2D5 763 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 CYP2W1Q8TAV3 490 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 CRYGNQ8WXF5 182 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 ARNTL2Q8WYA1 636 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 AGO4Q9HCK5 861 aaKnown RBP22.64■■□□□ 1.21
HPS4-213ENST00000483631 PKD2L1Q9P0L9 805 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 TUBE1Q9UJT0 475 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 COL4A6Q14031 1691 aa22.64■■□□□ 1.21
HPS4-213ENST00000483631 ATG7O95352 703 aa22.63■■□□□ 1.21
HPS4-213ENST00000483631 CTSHP09668 335 aa22.63■■□□□ 1.21
HPS4-213ENST00000483631 GNA11P29992 359 aa22.63■■□□□ 1.21
HPS4-213ENST00000483631 SLC26A2P50443 739 aa22.63■■□□□ 1.21
HPS4-213ENST00000483631 ERVK-21P61565 698 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms