RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 SREBF1P36956 1147 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 FGD1P98174 961 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 PTK7Q13308 1070 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 MTMR1Q13613 665 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 NLRX1Q86UT6 975 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 RPUSD2Q8IZ73 545 aaKnown RBP13.83□□□□□ -0.2
HDLBP-239ENST00000483086 CAGE1Q8TC20 777 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 AFAP1L1Q8TED9 768 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 MXRA8Q9BRK3 442 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 ZNF576Q9H609 170 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 KCNH7Q9NS40 1196 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 IGLV3-22A0A075B6J6 115 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 TMEM265A0A087WTH1 108 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 ZBBXA8MT70 800 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 hCG_1984214I3L0E3 225 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 MEIS1O00470 390 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 NOP56O00567 594 aaKnown RBP13.82□□□□□ -0.2
HDLBP-239ENST00000483086 EPB41L2O43491 1005 aaKnown RBP13.82□□□□□ -0.2
HDLBP-239ENST00000483086 IFNAR1P17181 557 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 RFC2P35250 354 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 DEFB103AP81534 67 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-239ENST00000483086 BFSP2Q13515 415 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 ADGRE1Q14246 886 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 RUFY4Q6ZNE9 571 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 ZNF713Q8N859 430 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-239ENST00000483086 USP38Q8NB14 1042 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 RETREG2Q8NC44 543 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 LMBR1Q8WVP7 490 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 AIFM3Q96NN9 605 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 VPS54Q9P1Q0 977 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 SLC4A7Q9Y6M7 1214 aa13.82□□□□□ -0.2
HDLBP-239ENST00000483086 PRRC2BQ5JSZ5 2229 aaKnown RBP13.82□□□□□ -0.2
HDLBP-239ENST00000483086 ESYT2A0FGR8 921 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 C17orf102A2RUQ5 167 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 CCNE2O96020 404 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 PFKMP08237 780 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 MARK3P27448 753 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 PSMA5P28066 241 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 NPY5RQ15761 445 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 MARCH8Q5T0T0 291 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 ERICH6BQ5W0A0 696 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 ATP6V0A1Q93050 837 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 SLC26A6Q9BXS9 759 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 TM6SF1Q9BZW5 370 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 FTOQ9C0B1 505 aaKnown RBP eCLIP13.81□□□□□ -0.2
HDLBP-239ENST00000483086 PRDM12Q9H4Q4 367 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 AGO4Q9HCK5 861 aaKnown RBP13.81□□□□□ -0.2
HDLBP-239ENST00000483086 ATG2AQ2TAZ0 1938 aa13.81□□□□□ -0.2
HDLBP-239ENST00000483086 EPOPA6NHQ4 379 aa13.8□□□□□ -0.2
HDLBP-239ENST00000483086 DHX15O43143 795 aaKnown RBP13.8□□□□□ -0.2
HDLBP-239ENST00000483086 LGR5O75473 907 aa13.8□□□□□ -0.2
HDLBP-239ENST00000483086 ATP2A2P16615 1042 aaKnown RBP13.8□□□□□ -0.2
HDLBP-239ENST00000483086 WDR5P61964 334 aaKnown RBP13.8□□□□□ -0.2
HDLBP-239ENST00000483086 ARHGAP4P98171 946 aa13.8□□□□□ -0.2
HDLBP-239ENST00000483086 STK3Q13188 491 aa13.8□□□□□ -0.2
HDLBP-239ENST00000483086 AP3B2Q13367 1082 aa13.8□□□□□ -0.2
HDLBP-239ENST00000483086 CEP55Q53EZ4 464 aa13.8□□□□□ -0.2
HDLBP-239ENST00000483086 SEPT1Q8WYJ6 367 aa13.8□□□□□ -0.2
HDLBP-239ENST00000483086 RNF26Q9BY78 433 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-239ENST00000483086 CYP46A1Q9Y6A2 500 aa13.8□□□□□ -0.2
HDLBP-239ENST00000483086 NLRC5Q86WI3 1866 aa13.8□□□□□ -0.2
HDLBP-239ENST00000483086 COL4A6Q14031 1691 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 CCDC196A0A1B0GTZ2 297 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 LCHNA4D1U4 455 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 LARGE1O95461 756 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 FOSP01100 380 aaPredicted RBP13.79□□□□□ -0.2
HDLBP-239ENST00000483086 CTSHP09668 335 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 THPOP40225 353 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 SCRN1Q12765 414 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.79□□□□□ -0.22e-12■■■■■ 38
HDLBP-239ENST00000483086 CCDC155Q8N6L0 562 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 SLC17A8Q8NDX2 589 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 LENG9Q96B70 501 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 JPH1Q9HDC5 661 aaPredicted RBP13.79□□□□□ -0.2
HDLBP-239ENST00000483086 GJB4Q9NTQ9 266 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 TPCN1Q9ULQ1 816 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 NFASCO94856 1347 aa13.79□□□□□ -0.2
HDLBP-239ENST00000483086 M0R2N6 131 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 DDX39AO00148 427 aaKnown RBP13.78□□□□□ -0.2
HDLBP-239ENST00000483086 RFXAPO00287 272 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 CTDNEP1O95476 244 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 CA3P07451 260 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 CYP3A4P08684 503 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 FOSL2P15408 326 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 ACTR2P61160 394 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 CNKSR3Q6P9H4 555 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 HERC6Q8IVU3 1022 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 DBF4BQ8NFT6 615 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 MAFAQ8NHW3 353 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-239ENST00000483086 TRAPPC12Q8WVT3 735 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 ZNF274Q96GC6 653 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-239ENST00000483086 CDHR1Q96JP9 859 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 PRDM6Q9NQX0 595 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 PDRG1Q9NUG6 133 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 SLC9A2Q9UBY0 812 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 PCDHA11Q9Y5I1 949 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 EMSYQ7Z589 1322 aa13.78□□□□□ -0.2
HDLBP-239ENST00000483086 IGKV6D-21A0A0A0MT36 114 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms