RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 CCDC84Q86UT8 332 aaPredicted RBP13.62□□□□□ -0.23
CCDC78-213ENST00000482878 FUKQ8N0W3 1084 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 MYCBPAPQ8TBZ2 947 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 ZNF483Q8TF39 744 aaPredicted RBP13.62□□□□□ -0.23
CCDC78-213ENST00000482878 MS4A14Q96JA4 679 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 EYA3Q99504 573 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 UBA5Q9GZZ9 404 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 RBM12Q9NTZ6 932 aaKnown RBP13.62□□□□□ -0.23
CCDC78-213ENST00000482878 POTEMA6NI47 508 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 EDIL3O43854 480 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 MARCH6O60337 910 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 TM4SF1P30408 202 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 SLC1A4P43007 532 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 NT5C2P49902 561 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 TMC4Q7Z404 712 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 REXO1Q8N1G1 1221 aaKnown RBP13.62□□□□□ -0.23
CCDC78-213ENST00000482878 GUF1Q8N442 669 aaKnown RBP13.62□□□□□ -0.23
CCDC78-213ENST00000482878 SAAL1Q96ER3 474 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 STIM2Q9P246 746 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 CASZ1Q86V15 1759 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 BAG3O95817 575 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 CDK8P49336 464 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 SKOR1P84550 965 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 KCNMA1Q12791 1236 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 CALCRLQ16602 461 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 KLHDC7AQ5VTJ3 777 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 HGSNATQ68CP4 663 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 KCNK18Q7Z418 384 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 ZIM3Q96PE6 472 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 SEC63Q9UGP8 760 aaKnown RBP13.61□□□□□ -0.23
CCDC78-213ENST00000482878 PVALEFA0A1B0GWK0 134 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 PJA2O43164 708 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 TDP2O95551 362 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 DNA2P51530 1060 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 GUCY2FP51841 1108 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 PTGISQ16647 500 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 C11orf91Q3C1V1 193 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 ODF2Q5BJF6 829 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 PDXDC1Q6P996 788 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 YIPF3Q9GZM5 350 aa13.61□□□□□ -0.23
CCDC78-213ENST00000482878 ACTR5Q9H9F9 607 aaPredicted RBP13.61□□□□□ -0.23
CCDC78-213ENST00000482878 KLHL33A6NCF5 533 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 GOLGA6L10A6NI86 522 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 PPP4CP60510 307 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 ACCSLQ4AC99 568 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 PNMA8AQ86V59 439 aaPredicted RBP13.6□□□□□ -0.23
CCDC78-213ENST00000482878 CNBD1Q8NA66 436 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 WDR66Q8TBY9 1149 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 ATP6V0A4Q9HBG4 840 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 NLRC4Q9NPP4 1024 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 ETAA1Q9NY74 926 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 UFL1O94874 794 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 KIF4AO95239 1232 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 EPHB4P54760 987 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 LRRC63Q05C16 580 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 PPP1R7Q15435 360 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 CACNA2D4Q7Z3S7 1137 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 DDX12PQ92771 950 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 CEP95Q96GE4 821 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 CDK5RAP3Q96JB5 506 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 TANGO6Q9C0B7 1094 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 STK17AQ9UEE5 414 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 SNED1Q8TER0 1413 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 ATXN2Q99700 1313 aaKnown RBP13.6□□□□□ -0.23
CCDC78-213ENST00000482878 USP17L5A8MUK1 530 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 TRIM37O94972 964 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 PAFAH1B1P43034 410 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 HIBCHQ6NVY1 386 aaPredicted RBP13.6□□□□□ -0.23
CCDC78-213ENST00000482878 C8orf74Q6P047 294 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 RUBCNQ92622 972 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 ARHGEF1Q92888 912 aaKnown RBP13.6□□□□□ -0.23
CCDC78-213ENST00000482878 NYXQ9GZU5 481 aa13.6□□□□□ -0.23
CCDC78-213ENST00000482878 EIF4E1BA6NMX2 242 aaKnown RBP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 FXR2P51116 673 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 PLCB4Q15147 1175 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 TDRD12Q587J7 1177 aaKnown RBP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 ALS2CLQ60I27 953 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 NSMCE1Q8WV22 266 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 RAD54LQ92698 747 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 COA7Q96BR5 231 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 NOX5Q96PH1 765 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 RTFDC1Q9BY42 306 aaPredicted RBP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 COL16A1Q07092 1604 aaPredicted RBP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 ABCB11O95342 1321 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 TLR2O60603 784 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 FGFR1OPO95684 399 aaKnown RBP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 GLI1P08151 1106 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 EHHADHQ08426 723 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 ECM1Q16610 540 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 EMBQ6PCB8 327 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 NEDD1Q8NHV4 660 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 SNX29Q8TEQ0 813 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 LMBR1Q8WVP7 490 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 TCP11Q8WWU5 503 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 TMX4Q9H1E5 349 aaPredicted RBP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 ZSCAN5CA6NGD5 496 aaPredicted RBP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 RTN2O75298 545 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 ADCY2Q08462 1091 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 NFIXQ14938 502 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms