RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 SMARCAD1Q9H4L7 1026 aa18.8■□□□□ 0.6
HMGN1-214ENST00000482733 DDX25Q9UHL0 483 aaKnown RBP18.8■□□□□ 0.6
HMGN1-214ENST00000482733 MSH4O15457 936 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 TDP2O95551 362 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 RAG1P15918 1043 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 KRT76Q01546 638 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 GUCY1B3Q02153 619 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 CUL4AQ13619 759 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 ZNF746Q6NUN9 644 aaPredicted RBP18.79■□□□□ 0.6
HMGN1-214ENST00000482733 SMAP1Q8IYB5 467 aaPredicted RBP18.79■□□□□ 0.6
HMGN1-214ENST00000482733 FOXP1Q9H334 677 aaPredicted RBP18.79■□□□□ 0.6
HMGN1-214ENST00000482733 AZI2Q9H6S1 392 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 TRMT13Q9NUP7 481 aaKnown RBP18.79■□□□□ 0.6
HMGN1-214ENST00000482733 ERAP1Q9NZ08 941 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 GTF2IRD1Q9UHL9 959 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 SMC3Q9UQE7 1217 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 NOD1Q9Y239 953 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 SCN10AQ9Y5Y9 1956 aa18.79■□□□□ 0.6
HMGN1-214ENST00000482733 EMSYQ7Z589 1322 aa18.78■□□□□ 0.6
HMGN1-214ENST00000482733 CCNT1O60563 726 aaKnown RBP18.78■□□□□ 0.6
HMGN1-214ENST00000482733 LGR5O75473 907 aa18.78■□□□□ 0.6
HMGN1-214ENST00000482733 ATG7O95352 703 aa18.78■□□□□ 0.6
HMGN1-214ENST00000482733 TIMP1P01033 207 aa18.78■□□□□ 0.6
HMGN1-214ENST00000482733 MAGEA10P43363 369 aaPredicted RBP18.78■□□□□ 0.6
HMGN1-214ENST00000482733 EARS2Q5JPH6 523 aaKnown RBP18.78■□□□□ 0.6
HMGN1-214ENST00000482733 MIS18BP1Q6P0N0 1132 aa18.78■□□□□ 0.6
HMGN1-214ENST00000482733 GLG1Q92896 1179 aa18.78■□□□□ 0.6
HMGN1-214ENST00000482733 SLC5A5Q92911 643 aa18.78■□□□□ 0.6
HMGN1-214ENST00000482733 TNPO1Q92973 898 aaKnown RBP18.78■□□□□ 0.6
HMGN1-214ENST00000482733 GDF15Q99988 308 aa18.78■□□□□ 0.6
HMGN1-214ENST00000482733 HDAC6Q9UBN7 1215 aa18.78■□□□□ 0.6
HMGN1-214ENST00000482733 TELO2Q9Y4R8 837 aa18.78■□□□□ 0.6
HMGN1-214ENST00000482733 DDX39AO00148 427 aaKnown RBP18.77■□□□□ 0.6
HMGN1-214ENST00000482733 GAS7O60861 476 aa18.77■□□□□ 0.6
HMGN1-214ENST00000482733 CCNE2O96020 404 aa18.77■□□□□ 0.6
HMGN1-214ENST00000482733 GNAT1P11488 350 aa18.77■□□□□ 0.6
HMGN1-214ENST00000482733 GJB2P29033 226 aa18.77■□□□□ 0.6
HMGN1-214ENST00000482733 BMP8BP34820 402 aa18.77■□□□□ 0.6
HMGN1-214ENST00000482733 GNL2Q13823 731 aaKnown RBP18.77■□□□□ 0.6
HMGN1-214ENST00000482733 PTGISQ16647 500 aa18.77■□□□□ 0.6
HMGN1-214ENST00000482733 LRCH2Q5VUJ6 765 aa18.77■□□□□ 0.6
HMGN1-214ENST00000482733 CHRDL2Q6WN34 429 aa18.77■□□□□ 0.6
HMGN1-214ENST00000482733 PLPPR4Q7Z2D5 763 aa18.77■□□□□ 0.6
HMGN1-214ENST00000482733 SNX21Q969T3 373 aa18.77■□□□□ 0.6
HMGN1-214ENST00000482733 TEKT3Q9BXF9 490 aa18.77■□□□□ 0.6
HMGN1-214ENST00000482733 C17orf102A2RUQ5 167 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 TBX3O15119 743 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 SLC26A2P50443 739 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 STAT5BP51692 787 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 MDM2Q00987 491 aaPredicted RBP18.76■□□□□ 0.59
HMGN1-214ENST00000482733 FAM160B1Q5W0V3 765 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 GDF6Q6KF10 455 aaPredicted RBP18.76■□□□□ 0.59
HMGN1-214ENST00000482733 ABHD15Q6UXT9 468 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 TRIM50Q86XT4 487 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 ETNPPLQ8TBG4 499 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 BADQ92934 168 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 FAM20AQ96MK3 541 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 HIPK3Q9H422 1215 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 PCDHA10Q9Y5I2 948 aa18.76■□□□□ 0.59
HMGN1-214ENST00000482733 MYH7BA7E2Y1 1941 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 IGKV6D-21A0A0A0MT36 114 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 FAM205CA6NFA0 338 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 WDR64B1ANS9 1081 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 K7ELQ4 463 aaPredicted RBP18.75■□□□□ 0.59
HMGN1-214ENST00000482733 PSAPP07602 524 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 SMIM10L2AP0DMW4 78 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 SMIM10L2BP0DMW5 78 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 SFNP31947 248 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 BFSP2Q13515 415 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 MFSD5Q6N075 450 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 CCDC155Q8N6L0 562 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 AFAP1L1Q8TED9 768 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 PPP1R13LQ8WUF5 828 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 INTS4Q96HW7 963 aaKnown RBP18.75■□□□□ 0.59
HMGN1-214ENST00000482733 UIMC1Q96RL1 719 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 PCYT2Q99447 389 aa18.75■□□□□ 0.59
HMGN1-214ENST00000482733 NOC4LQ9BVI4 516 aaKnown RBP18.75■□□□□ 0.59
HMGN1-214ENST00000482733 NRCAMQ92823 1304 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 H3BQV1 296 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 BACH1O14867 736 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 SLC37A4O43826 429 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 MARCH6O60337 910 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 PSMD10O75832 226 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 BAG4O95429 457 aaKnown RBP18.74■□□□□ 0.59
HMGN1-214ENST00000482733 CYP2C9P11712 490 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 ITGB8P26012 769 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 HOXC8P31273 242 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 JAK3P52333 1124 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 PTK7Q13308 1070 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 NOSTRINQ8IVI9 506 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 TMEM199Q8N511 208 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 RDM1Q8NG50 284 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 CAGE1Q8TC20 777 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 PPP1R12CQ9BZL4 782 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 UBE2OQ9C0C9 1292 aaKnown RBP18.74■□□□□ 0.59
HMGN1-214ENST00000482733 PRO3102Q9H379 93 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 RNPEPQ9H4A4 650 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 KCNMB3Q9NPA1 279 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 ZNF302Q9NR11 478 aa18.74■□□□□ 0.59
HMGN1-214ENST00000482733 SAMM50Q9Y512 469 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms