RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 GJB2P29033 226 aa23.69■■□□□ 1.38
SEC13-217ENST00000482647 GNL2Q13823 731 aaKnown RBP23.69■■□□□ 1.38
SEC13-217ENST00000482647 SH3RF1Q7Z6J0 888 aa23.69■■□□□ 1.38
SEC13-217ENST00000482647 SESTD1Q86VW0 696 aa23.69■■□□□ 1.38
SEC13-217ENST00000482647 RIT2Q99578 217 aa23.69■■□□□ 1.38
SEC13-217ENST00000482647 FOXP1Q9H334 677 aaPredicted RBP23.69■■□□□ 1.38
SEC13-217ENST00000482647 TCEAL9Q9UHQ7 104 aa23.69■■□□□ 1.38
SEC13-217ENST00000482647 TRIM43BA6NCK2 446 aa23.68■■□□□ 1.38
SEC13-217ENST00000482647 DDX39AO00148 427 aaKnown RBP23.68■■□□□ 1.38
SEC13-217ENST00000482647 B4GALT4O60513 344 aa23.68■■□□□ 1.38
SEC13-217ENST00000482647 CCNT1O60563 726 aaKnown RBP23.68■■□□□ 1.38
SEC13-217ENST00000482647 PPP1R13LQ8WUF5 828 aa23.68■■□□□ 1.38
SEC13-217ENST00000482647 GLG1Q92896 1179 aa23.68■■□□□ 1.38
SEC13-217ENST00000482647 SLC5A5Q92911 643 aa23.68■■□□□ 1.38
SEC13-217ENST00000482647 SNX21Q969T3 373 aa23.68■■□□□ 1.38
SEC13-217ENST00000482647 TRIM43Q96BQ3 446 aaPredicted RBP23.68■■□□□ 1.38
SEC13-217ENST00000482647 LBHD1Q9BQE6 289 aaPredicted RBP23.68■■□□□ 1.38
SEC13-217ENST00000482647 SMARCAD1Q9H4L7 1026 aa23.68■■□□□ 1.38
SEC13-217ENST00000482647 AZI2Q9H6S1 392 aa23.68■■□□□ 1.38
SEC13-217ENST00000482647 TRMT13Q9NUP7 481 aaKnown RBP23.68■■□□□ 1.38
SEC13-217ENST00000482647 ALPK3Q96L96 1907 aa23.67■■□□□ 1.38
SEC13-217ENST00000482647 FAM205CA6NFA0 338 aa23.67■■□□□ 1.38
SEC13-217ENST00000482647 CCNE2O96020 404 aa23.67■■□□□ 1.38
SEC13-217ENST00000482647 RAG1P15918 1043 aa23.67■■□□□ 1.38
SEC13-217ENST00000482647 KRT76Q01546 638 aa23.67■■□□□ 1.38
SEC13-217ENST00000482647 ZNF746Q6NUN9 644 aaPredicted RBP23.67■■□□□ 1.38
SEC13-217ENST00000482647 ERAP1Q9NZ08 941 aa23.67■■□□□ 1.38
SEC13-217ENST00000482647 HDAC6Q9UBN7 1215 aa23.67■■□□□ 1.38
SEC13-217ENST00000482647 TBX21Q9UL17 535 aa23.67■■□□□ 1.38
SEC13-217ENST00000482647 NOD1Q9Y239 953 aa23.67■■□□□ 1.38
SEC13-217ENST00000482647 K7ELQ4 463 aaPredicted RBP23.66■■□□□ 1.38
SEC13-217ENST00000482647 GAS7O60861 476 aa23.66■■□□□ 1.38
SEC13-217ENST00000482647 LGR5O75473 907 aa23.66■■□□□ 1.38
SEC13-217ENST00000482647 ATG7O95352 703 aa23.66■■□□□ 1.38
SEC13-217ENST00000482647 LRCH2Q5VUJ6 765 aa23.66■■□□□ 1.38
SEC13-217ENST00000482647 MIS18BP1Q6P0N0 1132 aa23.66■■□□□ 1.38
SEC13-217ENST00000482647 TRIM50Q86XT4 487 aa23.66■■□□□ 1.38
SEC13-217ENST00000482647 SMAP1Q8IYB5 467 aaPredicted RBP23.66■■□□□ 1.38
SEC13-217ENST00000482647 GTF2IRD1Q9UHL9 959 aa23.66■■□□□ 1.38
SEC13-217ENST00000482647 MYH7BA7E2Y1 1941 aa23.66■■□□□ 1.38
SEC13-217ENST00000482647 PTGISQ16647 500 aa23.65■■□□□ 1.38
SEC13-217ENST00000482647 ABHD15Q6UXT9 468 aa23.65■■□□□ 1.38
SEC13-217ENST00000482647 ETNPPLQ8TBG4 499 aa23.65■■□□□ 1.38
SEC13-217ENST00000482647 FAM20AQ96MK3 541 aa23.65■■□□□ 1.38
SEC13-217ENST00000482647 TEKT3Q9BXF9 490 aa23.65■■□□□ 1.38
SEC13-217ENST00000482647 SCN10AQ9Y5Y9 1956 aa23.65■■□□□ 1.38
SEC13-217ENST00000482647 EMSYQ7Z589 1322 aa23.64■■□□□ 1.38
SEC13-217ENST00000482647 H3BQV1 296 aa23.64■■□□□ 1.37
SEC13-217ENST00000482647 SLC37A4O43826 429 aa23.64■■□□□ 1.37
SEC13-217ENST00000482647 MARCH6O60337 910 aa23.64■■□□□ 1.37
SEC13-217ENST00000482647 TIMP1P01033 207 aa23.64■■□□□ 1.37
SEC13-217ENST00000482647 SMIM10L2AP0DMW4 78 aa23.64■■□□□ 1.37
SEC13-217ENST00000482647 SMIM10L2BP0DMW5 78 aa23.64■■□□□ 1.37
SEC13-217ENST00000482647 MAGEA10P43363 369 aaPredicted RBP23.64■■□□□ 1.37
SEC13-217ENST00000482647 STAT5BP51692 787 aa23.64■■□□□ 1.37
SEC13-217ENST00000482647 GDF6Q6KF10 455 aaPredicted RBP23.64■■□□□ 1.37
SEC13-217ENST00000482647 PLPPR4Q7Z2D5 763 aa23.64■■□□□ 1.37
SEC13-217ENST00000482647 NOSTRINQ8IVI9 506 aa23.64■■□□□ 1.37
SEC13-217ENST00000482647 SAMM50Q9Y512 469 aa23.64■■□□□ 1.37
SEC13-217ENST00000482647 PCDHA10Q9Y5I2 948 aa23.64■■□□□ 1.37
SEC13-217ENST00000482647 BACH1O14867 736 aa23.63■■□□□ 1.37
SEC13-217ENST00000482647 TBX3O15119 743 aa23.63■■□□□ 1.37
SEC13-217ENST00000482647 U2AF2P26368 475 aaKnown RBP eCLIP23.63■■□□□ 1.37
SEC13-217ENST00000482647 MDM2Q00987 491 aaPredicted RBP23.63■■□□□ 1.37
SEC13-217ENST00000482647 FAM160B1Q5W0V3 765 aa23.63■■□□□ 1.37
SEC13-217ENST00000482647 LARP1BQ659C4 914 aaKnown RBP23.63■■□□□ 1.37
SEC13-217ENST00000482647 HSCBQ8IWL3 235 aa23.63■■□□□ 1.37
SEC13-217ENST00000482647 TNPO1Q92973 898 aaKnown RBP23.63■■□□□ 1.37
SEC13-217ENST00000482647 GJA10Q969M2 543 aa23.63■■□□□ 1.37
SEC13-217ENST00000482647 INTS4Q96HW7 963 aaKnown RBP23.63■■□□□ 1.37
SEC13-217ENST00000482647 PCYT2Q99447 389 aa23.63■■□□□ 1.37
SEC13-217ENST00000482647 HIPK3Q9H422 1215 aa23.63■■□□□ 1.37
SEC13-217ENST00000482647 RNPEPQ9H4A4 650 aa23.63■■□□□ 1.37
SEC13-217ENST00000482647 IGKV6D-21A0A0A0MT36 114 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 C17orf102A2RUQ5 167 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 WDR64B1ANS9 1081 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 PSMD10O75832 226 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 BAG4O95429 457 aaKnown RBP23.62■■□□□ 1.37
SEC13-217ENST00000482647 PSAPP07602 524 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 GNAT1P11488 350 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 CYP2C9P11712 490 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 ITGB8P26012 769 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 SLC26A2P50443 739 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 CHRDL2Q6WN34 429 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 BADQ92934 168 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 GDF15Q99988 308 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 KCNMB3Q9NPA1 279 aa23.62■■□□□ 1.37
SEC13-217ENST00000482647 ATP2B1P20020 1258 aa23.61■■□□□ 1.37
SEC13-217ENST00000482647 MARK3P27448 753 aa23.61■■□□□ 1.37
SEC13-217ENST00000482647 SFNP31947 248 aa23.61■■□□□ 1.37
SEC13-217ENST00000482647 JAK3P52333 1124 aa23.61■■□□□ 1.37
SEC13-217ENST00000482647 MCTP1Q6DN14 999 aa23.61■■□□□ 1.37
SEC13-217ENST00000482647 SWSAP1Q6NVH7 229 aa23.61■■□□□ 1.37
SEC13-217ENST00000482647 AFAP1L1Q8TED9 768 aa23.61■■□□□ 1.37
SEC13-217ENST00000482647 NOC4LQ9BVI4 516 aaKnown RBP23.61■■□□□ 1.37
SEC13-217ENST00000482647 ZNF302Q9NR11 478 aa23.61■■□□□ 1.37
SEC13-217ENST00000482647 DISC1Q9NRI5 854 aa23.61■■□□□ 1.37
SEC13-217ENST00000482647 NOL7Q9UMY1 257 aaKnown RBP23.61■■□□□ 1.37
SEC13-217ENST00000482647 NRCAMQ92823 1304 aa23.6■■□□□ 1.37
SEC13-217ENST00000482647 KIF28PB7ZC32 967 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms