RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 PLA2G4DQ86XP0 818 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 DHX38Q92620 1227 aaKnown RBP18.86■□□□□ 0.61
VAMP4-204ENST00000482519 AIFM3Q96NN9 605 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 MTIF3Q9H2K0 278 aaKnown RBP18.86■□□□□ 0.61
VAMP4-204ENST00000482519 SETD4Q9NVD3 440 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 CXXC1Q9P0U4 656 aaPredicted RBP18.86■□□□□ 0.61
VAMP4-204ENST00000482519 SLC9A2Q9UBY0 812 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 GRXCR1A8MXD5 290 aa18.85■□□□□ 0.61
VAMP4-204ENST00000482519 DDX39AO00148 427 aaKnown RBP18.85■□□□□ 0.61
VAMP4-204ENST00000482519 CKBP12277 381 aa18.85■□□□□ 0.61
VAMP4-204ENST00000482519 SELPP16109 830 aa18.85■□□□□ 0.61
VAMP4-204ENST00000482519 RFC2P35250 354 aa18.85■□□□□ 0.61
VAMP4-204ENST00000482519 ITGB3BPQ13352 177 aaPredicted RBP18.85■□□□□ 0.61
VAMP4-204ENST00000482519 ZNF697Q5TEC3 545 aa18.85■□□□□ 0.61
VAMP4-204ENST00000482519 LRRC8DQ7L1W4 858 aa18.85■□□□□ 0.61
VAMP4-204ENST00000482519 NECAB1Q8N987 351 aa18.85■□□□□ 0.61
VAMP4-204ENST00000482519 AFAP1L1Q8TED9 768 aa18.85■□□□□ 0.61
VAMP4-204ENST00000482519 HERVK_113Q902F9 699 aa18.85■□□□□ 0.61
VAMP4-204ENST00000482519 RNPEPQ9H4A4 650 aa18.85■□□□□ 0.61
VAMP4-204ENST00000482519 CYP3A4P08684 503 aa18.84■□□□□ 0.61
VAMP4-204ENST00000482519 THPOP40225 353 aa18.84■□□□□ 0.61
VAMP4-204ENST00000482519 ACTR2P61160 394 aa18.84■□□□□ 0.61
VAMP4-204ENST00000482519 WNT8BQ93098 351 aa18.84■□□□□ 0.61
VAMP4-204ENST00000482519 PCDHA4Q9UN74 947 aa18.84■□□□□ 0.61
VAMP4-204ENST00000482519 NFASCO94856 1347 aa18.83■□□□□ 0.61
VAMP4-204ENST00000482519 TREHO43280 583 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 PFKMP08237 780 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 GNAT1P11488 350 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 ACTN1P12814 892 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 C8orf34Q49A92 452 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 PRR16Q569H4 304 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 ZNF618Q5T7W0 954 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 RASIP1Q5U651 963 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 NIPA1Q7RTP0 329 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 VWCEQ96DN2 955 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 IL17RAQ96F46 866 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 ZNF577Q9BSK1 485 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 SMARCAD1Q9H4L7 1026 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 AZI2Q9H6S1 392 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 MTMR10Q9NXD2 777 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 ERAP1Q9NZ08 941 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 KCNJ14Q9UNX9 436 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 SLC4A7Q9Y6M7 1214 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 TANC1Q9C0D5 1861 aa18.83■□□□□ 0.6
VAMP4-204ENST00000482519 IGLV3-22A0A075B6J6 115 aa18.82■□□□□ 0.6
VAMP4-204ENST00000482519 IPO5O00410 1097 aaKnown RBP18.82■□□□□ 0.6
VAMP4-204ENST00000482519 ME3Q16798 604 aa18.82■□□□□ 0.6
VAMP4-204ENST00000482519 SERINC5Q86VE9 423 aa18.82■□□□□ 0.6
VAMP4-204ENST00000482519 BLIDQ8IZY5 108 aa18.82■□□□□ 0.6
VAMP4-204ENST00000482519 LMBR1Q8WVP7 490 aa18.82■□□□□ 0.6
VAMP4-204ENST00000482519 CRYGNQ8WXF5 182 aa18.82■□□□□ 0.6
VAMP4-204ENST00000482519 KAT6AQ92794 2004 aa18.82■□□□□ 0.6
VAMP4-204ENST00000482519 RBAK-RBAKDNI3L0D1 243 aa18.81■□□□□ 0.6
VAMP4-204ENST00000482519 LARGE1O95461 756 aa18.81■□□□□ 0.6
VAMP4-204ENST00000482519 DNAJB2P25686 324 aa18.81■□□□□ 0.6
VAMP4-204ENST00000482519 PBX2P40425 430 aa18.81■□□□□ 0.6
VAMP4-204ENST00000482519 IGBP1P78318 339 aa18.81■□□□□ 0.6
VAMP4-204ENST00000482519 PPFIA1Q13136 1202 aa18.81■□□□□ 0.6
VAMP4-204ENST00000482519 TBCKQ8TEA7 893 aa18.81■□□□□ 0.6
VAMP4-204ENST00000482519 ORC3Q9UBD5 711 aaPredicted RBP18.81■□□□□ 0.6
VAMP4-204ENST00000482519 NRCAMQ92823 1304 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 BACH1O14867 736 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 CTDNEP1O95476 244 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 CCNE2O96020 404 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 CTSHP09668 335 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 XBP1P17861 261 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 HOXC8P31273 242 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 SETQ01105 290 aaPredicted RBP18.8■□□□□ 0.6
VAMP4-204ENST00000482519 RBL2Q08999 1139 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 TRIM71Q2Q1W2 868 aaKnown RBP18.8■□□□□ 0.6
VAMP4-204ENST00000482519 GTF3C6Q969F1 213 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 PCYT2Q99447 389 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 PBX4Q9BYU1 374 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 SEMA6BQ9H3T3 888 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 TCEAL9Q9UHQ7 104 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 TRPC6Q9Y210 931 aa18.8■□□□□ 0.6
VAMP4-204ENST00000482519 STK36Q9NRP7 1315 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 RSPH10B2B2RC85 870 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 NBNO60934 754 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 RSPH10BP0C881 870 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 ATP2A2P16615 1042 aaKnown RBP18.79■□□□□ 0.6
VAMP4-204ENST00000482519 STAT5BP51692 787 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 USP11P51784 963 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 RABGGTBP53611 331 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 GRIK4Q16099 956 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 GALNT17Q6IS24 598 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 TIFAQ96CG3 184 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 TTYH1Q9H313 450 aaPredicted RBP18.79■□□□□ 0.6
VAMP4-204ENST00000482519 GJB4Q9NTQ9 266 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 TBC1D22BQ9NU19 505 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 MSRAQ9UJ68 235 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 TET1Q8NFU7 2136 aa18.79■□□□□ 0.6
VAMP4-204ENST00000482519 EMSYQ7Z589 1322 aa18.78■□□□□ 0.6
VAMP4-204ENST00000482519 DHX15O43143 795 aaKnown RBP18.78■□□□□ 0.6
VAMP4-204ENST00000482519 LGR5O75473 907 aa18.78■□□□□ 0.6
VAMP4-204ENST00000482519 PARNO95453 639 aaKnown RBP18.78■□□□□ 0.6
VAMP4-204ENST00000482519 CIITAP33076 1130 aa18.78■□□□□ 0.6
VAMP4-204ENST00000482519 GPNMBQ14956 572 aa18.78■□□□□ 0.6
VAMP4-204ENST00000482519 MIS18BP1Q6P0N0 1132 aa18.78■□□□□ 0.6
VAMP4-204ENST00000482519 DAGLBQ8NCG7 672 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms