RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 ZNF576Q9H609 170 aa23.65■■□□□ 1.38
TRA2A-206ENST00000482395 JPH1Q9HDC5 661 aaPredicted RBP23.65■■□□□ 1.38
TRA2A-206ENST00000482395 SH3GLB2Q9NR46 395 aa23.65■■□□□ 1.38
TRA2A-206ENST00000482395 EMSYQ7Z589 1322 aa23.64■■□□□ 1.38
TRA2A-206ENST00000482395 CPLX1O14810 134 aa23.64■■□□□ 1.37
TRA2A-206ENST00000482395 CXCL10P02778 98 aa23.64■■□□□ 1.37
TRA2A-206ENST00000482395 ZNF76P36508 570 aa23.64■■□□□ 1.37
TRA2A-206ENST00000482395 ARHGAP4P98171 946 aa23.64■■□□□ 1.37
TRA2A-206ENST00000482395 PIAS4Q8N2W9 510 aaPredicted RBP23.64■■□□□ 1.37
TRA2A-206ENST00000482395 PDRG1Q9NUG6 133 aa23.64■■□□□ 1.37
TRA2A-206ENST00000482395 TMEM260Q9NX78 707 aa23.64■■□□□ 1.37
TRA2A-206ENST00000482395 ERAP1Q9NZ08 941 aa23.64■■□□□ 1.37
TRA2A-206ENST00000482395 SLC9A2Q9UBY0 812 aa23.64■■□□□ 1.37
TRA2A-206ENST00000482395 NRCAMQ92823 1304 aa23.63■■□□□ 1.37
TRA2A-206ENST00000482395 GRXCR1A8MXD5 290 aa23.63■■□□□ 1.37
TRA2A-206ENST00000482395 MEIS1O00470 390 aa23.63■■□□□ 1.37
TRA2A-206ENST00000482395 EFCAB14O75071 495 aa23.63■■□□□ 1.37
TRA2A-206ENST00000482395 CYP3A4P08684 503 aa23.63■■□□□ 1.37
TRA2A-206ENST00000482395 ATP2A2P16615 1042 aaKnown RBP23.63■■□□□ 1.37
TRA2A-206ENST00000482395 ZNF200P98182 395 aaPredicted RBP23.63■■□□□ 1.37
TRA2A-206ENST00000482395 HIC1Q14526 733 aa23.63■■□□□ 1.37
TRA2A-206ENST00000482395 JAKMIP3Q5VZ66 844 aa23.63■■□□□ 1.37
TRA2A-206ENST00000482395 CNKSR3Q6P9H4 555 aa23.63■■□□□ 1.37
TRA2A-206ENST00000482395 TRIM50Q86XT4 487 aa23.63■■□□□ 1.37
TRA2A-206ENST00000482395 FAM177A1Q8N128 213 aaPredicted RBP23.63■■□□□ 1.37
TRA2A-206ENST00000482395 SMARCAD1Q9H4L7 1026 aa23.63■■□□□ 1.37
TRA2A-206ENST00000482395 NCOA5Q9HCD5 579 aaKnown RBP23.63■■□□□ 1.37
TRA2A-206ENST00000482395 PCDHA11Q9Y5I1 949 aa23.63■■□□□ 1.37
TRA2A-206ENST00000482395 GSTTP1A0A1W2PQM5 241 aa23.62■■□□□ 1.37
TRA2A-206ENST00000482395 PBX2P40425 430 aa23.62■■□□□ 1.37
TRA2A-206ENST00000482395 SETQ01105 290 aaPredicted RBP23.62■■□□□ 1.37
TRA2A-206ENST00000482395 SSRP1Q08945 709 aaKnown RBP23.62■■□□□ 1.37
TRA2A-206ENST00000482395 ZNF618Q5T7W0 954 aa23.62■■□□□ 1.37
TRA2A-206ENST00000482395 CRYGNQ8WXF5 182 aa23.62■■□□□ 1.37
TRA2A-206ENST00000482395 TNPO1Q92973 898 aaKnown RBP23.62■■□□□ 1.37
TRA2A-206ENST00000482395 PKD2L1Q9P0L9 805 aa23.62■■□□□ 1.37
TRA2A-206ENST00000482395 PTPRSQ13332 1948 aa23.62■■□□□ 1.37
TRA2A-206ENST00000482395 MYO9BQ13459 2157 aa23.62■■□□□ 1.37
TRA2A-206ENST00000482395 COL6A3P12111 3177 aa23.61■■□□□ 1.37
TRA2A-206ENST00000482395 MICAL3Q7RTP6 2002 aa23.61■■□□□ 1.37
TRA2A-206ENST00000482395 TREHO43280 583 aa23.61■■□□□ 1.37
TRA2A-206ENST00000482395 CYP2W1Q8TAV3 490 aa23.61■■□□□ 1.37
TRA2A-206ENST00000482395 WNT8BQ93098 351 aa23.61■■□□□ 1.37
TRA2A-206ENST00000482395 AZI2Q9H6S1 392 aa23.61■■□□□ 1.37
TRA2A-206ENST00000482395 AGO4Q9HCK5 861 aaKnown RBP23.61■■□□□ 1.37
TRA2A-206ENST00000482395 NBNO60934 754 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 LGR5O75473 907 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 DEXIO95424 95 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 ARP10275 920 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 THPOP40225 353 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 KCNJ6P48051 423 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 ADAM17P78536 824 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 GPNMBQ14956 572 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 TRAF7Q6Q0C0 670 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 GLG1Q92896 1179 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 C22orf23Q9BZE7 217 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 SLC28A3Q9HAS3 691 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 SETD4Q9NVD3 440 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 TELO2Q9Y4R8 837 aa23.6■■□□□ 1.37
TRA2A-206ENST00000482395 MYH9P35579 1960 aaKnown RBP23.6■■□□□ 1.37
TRA2A-206ENST00000482395 RSPH10B2B2RC85 870 aa23.59■■□□□ 1.37
TRA2A-206ENST00000482395 CDKL5O76039 1030 aa23.59■■□□□ 1.37
TRA2A-206ENST00000482395 RPLP2P05387 115 aaKnown RBP23.59■■□□□ 1.37
TRA2A-206ENST00000482395 RSPH10BP0C881 870 aa23.59■■□□□ 1.37
TRA2A-206ENST00000482395 FOSL2P15408 326 aa23.59■■□□□ 1.37
TRA2A-206ENST00000482395 ANKRD1Q15327 319 aa23.59■■□□□ 1.37
TRA2A-206ENST00000482395 TAF2Q6P1X5 1199 aa23.59■■□□□ 1.37
TRA2A-206ENST00000482395 PLA2G4DQ86XP0 818 aa23.59■■□□□ 1.37
TRA2A-206ENST00000482395 LMBR1Q8WVP7 490 aa23.59■■□□□ 1.37
TRA2A-206ENST00000482395 MYLIPQ8WY64 445 aa23.59■■□□□ 1.37
TRA2A-206ENST00000482395 IL17RAQ96F46 866 aa23.59■■□□□ 1.37
TRA2A-206ENST00000482395 ABHD14A-ACY1A0A1B0GW23 586 aa23.58■■□□□ 1.37
TRA2A-206ENST00000482395 PPFIA1Q13136 1202 aa23.58■■□□□ 1.37
TRA2A-206ENST00000482395 ITGB3BPQ13352 177 aaPredicted RBP23.58■■□□□ 1.37
TRA2A-206ENST00000482395 GRIN2CQ14957 1233 aa23.58■■□□□ 1.37
TRA2A-206ENST00000482395 PLPPR4Q7Z2D5 763 aa23.58■■□□□ 1.37
TRA2A-206ENST00000482395 RPAINQ86UA6 219 aa23.58■■□□□ 1.37
TRA2A-206ENST00000482395 VPS54Q9P1Q0 977 aa23.58■■□□□ 1.37
TRA2A-206ENST00000482395 CDH23Q9H251 3354 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 IGLV3-22A0A075B6J6 115 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 KIF28PB7ZC32 967 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 FAM86B1E9PN63 330 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 FAM86B2P0C5J1 330 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 CIITAP33076 1130 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 SLC26A2P50443 739 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 NLRP5P59047 1200 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 ACTR2P61160 394 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 IKBKEQ14164 716 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 GALNT17Q6IS24 598 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 GAS2L1Q99501 681 aaPredicted RBP23.57■■□□□ 1.36
TRA2A-206ENST00000482395 NKX2-4Q9H2Z4 354 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 TBC1D22BQ9NU19 505 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 YBX2Q9Y2T7 364 aaKnown RBP23.57■■□□□ 1.36
TRA2A-206ENST00000482395 WDR81Q562E7 1941 aa23.57■■□□□ 1.36
TRA2A-206ENST00000482395 RRN3P2A6NIE6 340 aa23.56■■□□□ 1.36
TRA2A-206ENST00000482395 ATG7O95352 703 aa23.56■■□□□ 1.36
TRA2A-206ENST00000482395 WDR5P61964 334 aaKnown RBP23.56■■□□□ 1.36
TRA2A-206ENST00000482395 STK3Q13188 491 aa23.56■■□□□ 1.36
TRA2A-206ENST00000482395 RSPH3Q86UC2 560 aa23.56■■□□□ 1.36
TRA2A-206ENST00000482395 SLC17A8Q8NDX2 589 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms