RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 THAP9Q9H5L6 903 aa24.59■■□□□ 1.53
RUNX1-216ENST00000482318 SLC39A2Q9NP94 309 aa24.59■■□□□ 1.53
RUNX1-216ENST00000482318 RGL1Q9NZL6 768 aa24.59■■□□□ 1.53
RUNX1-216ENST00000482318 TCEAL9Q9UHQ7 104 aa24.59■■□□□ 1.53
RUNX1-216ENST00000482318 TTI2Q6NXR4 508 aa24.58■■□□□ 1.53
RUNX1-216ENST00000482318 TPH2Q8IWU9 490 aa24.58■■□□□ 1.53
RUNX1-216ENST00000482318 CCDC150Q8NCX0 1101 aa24.58■■□□□ 1.53
RUNX1-216ENST00000482318 ASCC2Q9H1I8 757 aaPredicted RBP24.58■■□□□ 1.53
RUNX1-216ENST00000482318 LIMA1Q9UHB6 759 aaKnown RBP24.58■■□□□ 1.53
RUNX1-216ENST00000482318 KIF20AO95235 890 aa24.58■■□□□ 1.52
RUNX1-216ENST00000482318 PSMC6P62333 389 aa24.58■■□□□ 1.52
RUNX1-216ENST00000482318 FAM26FQ5R3K3 315 aa24.58■■□□□ 1.52
RUNX1-216ENST00000482318 MIER3Q7Z3K6 550 aa24.58■■□□□ 1.52
RUNX1-216ENST00000482318 NACC1Q96RE7 527 aa24.58■■□□□ 1.52
RUNX1-216ENST00000482318 FRMD3A2A2Y4 597 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 TESPA1A2RU30 521 aaPredicted RBP24.57■■□□□ 1.52
RUNX1-216ENST00000482318 DHX15O43143 795 aaKnown RBP24.57■■□□□ 1.52
RUNX1-216ENST00000482318 OSBPP22059 807 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 COPB2P35606 906 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 HERVK_113P62684 666 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 SNAPC2Q13487 334 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 CTTNQ14247 550 aaKnown RBP24.57■■□□□ 1.52
RUNX1-216ENST00000482318 FOXR2Q6PJQ5 311 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 LRRC8AQ8IWT6 810 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 DNERQ8NFT8 737 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 SLC10A4Q96EP9 437 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 BHMT2Q9H2M3 363 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 LCTP09848 1927 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 KIAA1217Q5T5P2 1943 aa24.57■■□□□ 1.52
RUNX1-216ENST00000482318 TRIM49BA6NDI0 452 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 LRRC10BA6NIK2 292 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 KCNJ18B7U540 433 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 EEF1GP26641 437 aaKnown RBP24.56■■□□□ 1.52
RUNX1-216ENST00000482318 FKBP1BP68106 108 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 KCNJ12Q14500 433 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 NR1I3Q14994 352 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 ARSHQ5FYA8 562 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 TCP11X2Q5H9J9 407 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 MAP1SQ66K74 1059 aaPredicted RBP24.56■■□□□ 1.52
RUNX1-216ENST00000482318 CENPPQ6IPU0 288 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 APTXQ7Z2E3 356 aaKnown RBP24.56■■□□□ 1.52
RUNX1-216ENST00000482318 FAM114A1Q8IWE2 563 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 CDHR1Q96JP9 859 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 IWS1Q96ST2 819 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 SPATC1LQ9H0A9 340 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 BTBD7Q9P203 1132 aa24.56■■□□□ 1.52
RUNX1-216ENST00000482318 PMS1P54277 932 aaKnown RBP24.55■■□□□ 1.52
RUNX1-216ENST00000482318 ITGB3BPQ13352 177 aaPredicted RBP24.55■■□□□ 1.52
RUNX1-216ENST00000482318 ANKRD35Q8N283 1001 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 CSGALNACT2Q8N6G5 542 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 CACTINQ8WUQ7 758 aaKnown RBP24.55■■□□□ 1.52
RUNX1-216ENST00000482318 INPP4AQ96PE3 977 aaPredicted RBP24.55■■□□□ 1.52
RUNX1-216ENST00000482318 INTS13Q9NVM9 706 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 PKD2L1Q9P0L9 805 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 MAGEC2Q9UBF1 373 aaPredicted RBP24.55■■□□□ 1.52
RUNX1-216ENST00000482318 ADD3Q9UEY8 706 aaKnown RBP24.55■■□□□ 1.52
RUNX1-216ENST00000482318 DDX39AO00148 427 aaKnown RBP24.55■■□□□ 1.52
RUNX1-216ENST00000482318 NRDCO43847 1150 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 COBLO75128 1261 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 SLC25A27O95847 323 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 P4HBP07237 508 aaKnown RBP24.55■■□□□ 1.52
RUNX1-216ENST00000482318 KRT76Q01546 638 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 LRRC63Q05C16 580 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 HERC4Q5GLZ8 1057 aaPredicted RBP24.55■■□□□ 1.52
RUNX1-216ENST00000482318 MYOCDQ8IZQ8 938 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 HPS3Q969F9 1004 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 PURBQ96QR8 312 aaKnown RBP24.55■■□□□ 1.52
RUNX1-216ENST00000482318 LXNQ9BS40 222 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 KCND2Q9NZV8 630 aa24.55■■□□□ 1.52
RUNX1-216ENST00000482318 FGFR1OPO95684 399 aaKnown RBP24.54■■□□□ 1.52
RUNX1-216ENST00000482318 SFNP31947 248 aa24.54■■□□□ 1.52
RUNX1-216ENST00000482318 JAK3P52333 1124 aa24.54■■□□□ 1.52
RUNX1-216ENST00000482318 MOGSQ13724 837 aa24.54■■□□□ 1.52
RUNX1-216ENST00000482318 GIT2Q14161 759 aa24.54■■□□□ 1.52
RUNX1-216ENST00000482318 KRT31Q15323 416 aa24.54■■□□□ 1.52
RUNX1-216ENST00000482318 GNPTABQ3T906 1256 aa24.54■■□□□ 1.52
RUNX1-216ENST00000482318 SPECC1LQ69YQ0 1117 aa24.54■■□□□ 1.52
RUNX1-216ENST00000482318 SRRTQ9BXP5 876 aaKnown RBP24.54■■□□□ 1.52
RUNX1-216ENST00000482318 POTEJP0CG39 1038 aa24.53■■□□□ 1.52
RUNX1-216ENST00000482318 SFPQP23246 707 aaKnown RBP eCLIP24.53■■□□□ 1.52
RUNX1-216ENST00000482318 ANKRD40Q6AI12 368 aa24.53■■□□□ 1.52
RUNX1-216ENST00000482318 RDM1Q8NG50 284 aa24.53■■□□□ 1.52
RUNX1-216ENST00000482318 TSG101Q99816 390 aa24.53■■□□□ 1.52
RUNX1-216ENST00000482318 DUSP9Q99956 384 aaKnown RBP24.53■■□□□ 1.52
RUNX1-216ENST00000482318 REEP2Q9BRK0 252 aa24.53■■□□□ 1.52
RUNX1-216ENST00000482318 ZSWIM4Q9H7M6 989 aa24.53■■□□□ 1.52
RUNX1-216ENST00000482318 ZNF408Q9H9D4 720 aa24.53■■□□□ 1.52
RUNX1-216ENST00000482318 RTN4Q9NQC3 1192 aaKnown RBP24.53■■□□□ 1.52
RUNX1-216ENST00000482318 NPHP3-ACAD11A0A0J9YXS1 232 aa24.52■■□□□ 1.52
RUNX1-216ENST00000482318 TBCAO75347 108 aaKnown RBP24.52■■□□□ 1.52
RUNX1-216ENST00000482318 PIGOQ8TEQ8 1089 aa24.52■■□□□ 1.52
RUNX1-216ENST00000482318 PAGR1Q9BTK6 254 aa24.52■■□□□ 1.52
RUNX1-216ENST00000482318 PNMA3Q9UL41 463 aa24.52■■□□□ 1.52
RUNX1-216ENST00000482318 SAMM50Q9Y512 469 aa24.52■■□□□ 1.52
RUNX1-216ENST00000482318 TRAF5O00463 557 aa24.52■■□□□ 1.52
RUNX1-216ENST00000482318 GAP43P17677 238 aa24.52■■□□□ 1.52
RUNX1-216ENST00000482318 LRMPQ12912 555 aa24.52■■□□□ 1.52
RUNX1-216ENST00000482318 NCAPG2Q86XI2 1143 aa24.52■■□□□ 1.52
RUNX1-216ENST00000482318 KIAA1524Q8TCG1 905 aa24.52■■□□□ 1.52
RUNX1-216ENST00000482318 GTF3C2Q8WUA4 911 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms