RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 PKN1Q16512 942 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 PFKFB3Q16875 520 aaPredicted RBP11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 PLEKHG4Q58EX7 1191 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 TRIM50Q86XT4 487 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 CYP2W1Q8TAV3 490 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 ATP6V0A1Q93050 837 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 MXRA8Q9BRK3 442 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 GLT8D2Q9H1C3 349 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 KCNH7Q9NS40 1196 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 SETD4Q9NVD3 440 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 NFASCO94856 1347 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 NRCAMQ92823 1304 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 EYSQ5T1H1 3165 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 SMCO2A6NFE2 343 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 GOLGA8BA8MQT2 603 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 RSPH10B2B2RC85 870 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 PRPF3O43395 683 aaKnown RBP11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 ARHGEF15O94989 841 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 REC8O95072 547 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 ATG7O95352 703 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 CA3P07451 260 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 CYP3A4P08684 503 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 RSPH10BP0C881 870 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 GNAT1P11488 350 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 TCF7P36402 384 aaPredicted RBP11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 SREBF1P36956 1147 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 NAPAP54920 295 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 AP3B2Q13367 1082 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 CEP55Q53EZ4 464 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 Q6ZUG5 572 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 NIPA1Q7RTP0 329 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 LMBR1Q8WVP7 490 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 JAKMIP1Q96N16 626 aaKnown RBP11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 PCYT2Q99447 389 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 OSBPL7Q9BZF2 842 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 ZMYND12Q9H0C1 365 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 ZSWIM6Q9HCJ5 1215 aa11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 ZNF215Q9UL58 517 aaPredicted RBP11.13□□□□□ -0.63
TMEM39A-207ENST00000482162 GBF1Q92538 1859 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 IGKV6D-21A0A0A0MT36 114 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 GJB5O95377 273 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 ARP10275 920 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 SCG2P13521 617 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 PDIA3P30101 505 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 THPOP40225 353 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 APOBRQ0VD83 1088 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 IKBKEQ14164 716 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 MARCH8Q5T0T0 291 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 PPP2R2DQ66LE6 453 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 BLOC1S2Q6QNY1 142 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 DBF4BQ8NFT6 615 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 BRF1Q92994 677 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 GAS2L1Q99501 681 aaPredicted RBP11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 TM6SF1Q9BZW5 370 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 SMARCAD1Q9H4L7 1026 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 EHMT1Q9H9B1 1298 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 AGO4Q9HCK5 861 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 ERAP1Q9NZ08 941 aa11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 PRRC2BQ5JSZ5 2229 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-207ENST00000482162 IGLV3-22A0A075B6J6 115 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 EPOPA6NHQ4 379 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 KIF28PB7ZC32 967 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 ADAMTS3O15072 1205 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 DHX15O43143 795 aaKnown RBP11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 EDIL3O43854 480 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 LPXNO60711 386 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 CHRNA1P02708 482 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 IFNAR1P17181 557 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 PSMA5P28066 241 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 METAP2P50579 478 aaKnown RBP eCLIP11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 ADCY7P51828 1080 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 DEFB103AP81534 67 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 HTRA4P83105 476 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 ITGB3BPQ13352 177 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 UTP14CQ5TAP6 766 aaKnown RBP11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 MCTP2Q6DN12 878 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 TAF2Q6P1X5 1199 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 PLPPR4Q7Z2D5 763 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 RAD9AQ99638 391 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 ANO3Q9BYT9 981 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 JPH1Q9HDC5 661 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 TMEM260Q9NX78 707 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 NCOR1O75376 2440 aa11.11□□□□□ -0.63
TMEM39A-207ENST00000482162 DOCK5Q9H7D0 1870 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 TRANK1O15050 2925 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 PTPRSQ13332 1948 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 LCHNA4D1U4 455 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 FAM86B1E9PN63 330 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 RBAK-RBAKDNI3L0D1 243 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 TLL1O43897 1013 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 CCNE2O96020 404 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 FAM86B2P0C5J1 330 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 CIITAP33076 1130 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 KCNJ6P48051 423 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 ACTR2P61160 394 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 ARHGAP4P98171 946 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 MGAT3Q09327 533 aa11.1□□□□□ -0.63
TMEM39A-207ENST00000482162 TOB2Q14106 344 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms