RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 ACTR2P61160 394 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 KRT76Q01546 638 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 SP4Q02446 784 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 INF2Q27J81 1249 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 PIK3AP1Q6ZUJ8 805 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 PLPPR4Q7Z2D5 763 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 SMAP1Q8IYB5 467 aaPredicted RBP18.51■□□□□ 0.55
CCDC78-212ENST00000482152 DIS3L2Q8IYB7 885 aaKnown RBP18.51■□□□□ 0.55
CCDC78-212ENST00000482152 OXER1Q8TDS5 423 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 TNFRSF25Q93038 417 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 TRPV6Q9H1D0 765 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 FOXP1Q9H334 677 aaPredicted RBP18.51■□□□□ 0.55
CCDC78-212ENST00000482152 PRO3102Q9H379 93 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 NOD1Q9Y239 953 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 SCN10AQ9Y5Y9 1956 aa18.51■□□□□ 0.55
CCDC78-212ENST00000482152 EMSYQ7Z589 1322 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 BTBD18B2RXH4 712 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 CD2BP2O95400 341 aaKnown RBP18.5■□□□□ 0.55
CCDC78-212ENST00000482152 CHMP4BP1P59074 171 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 PTGISQ16647 500 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 LETM2Q2VYF4 491 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 MFSD5Q6N075 450 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 CHRDL2Q6WN34 429 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 TMEM199Q8N511 208 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 CCDC155Q8N6L0 562 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 GLG1Q92896 1179 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 FAM20AQ96MK3 541 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 HIPK3Q9H422 1215 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 HDAC6Q9UBN7 1215 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 DDX25Q9UHL0 483 aaKnown RBP18.5■□□□□ 0.55
CCDC78-212ENST00000482152 MYH7BA7E2Y1 1941 aa18.5■□□□□ 0.55
CCDC78-212ENST00000482152 IGKV6D-21A0A0A0MT36 114 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 TBX3O15119 743 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 MSH4O15457 936 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 DTNBO60941 627 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 SFNP31947 248 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 NR5A1Q13285 461 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 BFSP2Q13515 415 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 UTP14CQ5TAP6 766 aaKnown RBP18.49■□□□□ 0.55
CCDC78-212ENST00000482152 MIS18BP1Q6P0N0 1132 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 ABHD15Q6UXT9 468 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 SLC5A5Q92911 643 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 BADQ92934 168 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 TRMT13Q9NUP7 481 aaKnown RBP18.49■□□□□ 0.55
CCDC78-212ENST00000482152 NRCAMQ92823 1304 aa18.49■□□□□ 0.55
CCDC78-212ENST00000482152 C17orf102A2RUQ5 167 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 PITPNM1O00562 1244 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 CCNT1O60563 726 aaKnown RBP18.48■□□□□ 0.55
CCDC78-212ENST00000482152 PSAPP07602 524 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 HOXC8P31273 242 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 STAT5BP51692 787 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 MDM2Q00987 491 aaPredicted RBP18.48■□□□□ 0.55
CCDC78-212ENST00000482152 PTK7Q13308 1070 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 CUL4AQ13619 759 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 FAM160B1Q5W0V3 765 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 GDF6Q6KF10 455 aaPredicted RBP18.48■□□□□ 0.55
CCDC78-212ENST00000482152 RETREG2Q8NC44 543 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 RDM1Q8NG50 284 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 CAGE1Q8TC20 777 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 AFAP1L1Q8TED9 768 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 NOC4LQ9BVI4 516 aaKnown RBP18.48■□□□□ 0.55
CCDC78-212ENST00000482152 TEKT3Q9BXF9 490 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 UBE2OQ9C0C9 1292 aaKnown RBP18.48■□□□□ 0.55
CCDC78-212ENST00000482152 SMC3Q9UQE7 1217 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 COLQQ9Y215 455 aaPredicted RBP18.48■□□□□ 0.55
CCDC78-212ENST00000482152 PCDHA10Q9Y5I2 948 aa18.48■□□□□ 0.55
CCDC78-212ENST00000482152 WDR64B1ANS9 1081 aa18.47■□□□□ 0.55
CCDC78-212ENST00000482152 GAS7O60861 476 aa18.47■□□□□ 0.55
CCDC78-212ENST00000482152 BAG4O95429 457 aaKnown RBP18.47■□□□□ 0.55
CCDC78-212ENST00000482152 PARNO95453 639 aaKnown RBP18.47■□□□□ 0.55
CCDC78-212ENST00000482152 TDP2O95551 362 aa18.47■□□□□ 0.55
CCDC78-212ENST00000482152 CCNE2O96020 404 aa18.47■□□□□ 0.55
CCDC78-212ENST00000482152 SMIM10L2AP0DMW4 78 aa18.47■□□□□ 0.55
CCDC78-212ENST00000482152 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
CCDC78-212ENST00000482152 FPGSQ05932 587 aa18.47■□□□□ 0.55
CCDC78-212ENST00000482152 PPIGQ13427 754 aaKnown RBP eCLIP18.47■□□□□ 0.55
CCDC78-212ENST00000482152 LRCH2Q5VUJ6 765 aa18.47■□□□□ 0.55
CCDC78-212ENST00000482152 ETNPPLQ8TBG4 499 aa18.47■□□□□ 0.55
CCDC78-212ENST00000482152 RRN3P2A6NIE6 340 aa18.46■□□□□ 0.55
CCDC78-212ENST00000482152 PSMD10O75832 226 aa18.46■□□□□ 0.55
CCDC78-212ENST00000482152 RPLP2P05387 115 aaKnown RBP18.46■□□□□ 0.55
CCDC78-212ENST00000482152 ITGB8P26012 769 aa18.46■□□□□ 0.55
CCDC78-212ENST00000482152 JAK3P52333 1124 aa18.46■□□□□ 0.55
CCDC78-212ENST00000482152 RBL2Q08999 1139 aa18.46■□□□□ 0.55
CCDC78-212ENST00000482152 ORC2Q13416 577 aaPredicted RBP18.46■□□□□ 0.55
CCDC78-212ENST00000482152 GNL2Q13823 731 aaKnown RBP18.46■□□□□ 0.55
CCDC78-212ENST00000482152 SLFN12Q8IYM2 578 aa18.46■□□□□ 0.55
CCDC78-212ENST00000482152 RPUSD2Q8IZ73 545 aaKnown RBP18.46■□□□□ 0.55
CCDC78-212ENST00000482152 ATP6V0A1Q93050 837 aa18.46■□□□□ 0.55
CCDC78-212ENST00000482152 SNX21Q969T3 373 aa18.46■□□□□ 0.55
CCDC78-212ENST00000482152 RNPEPQ9H4A4 650 aa18.46■□□□□ 0.55
CCDC78-212ENST00000482152 TELO2Q9Y4R8 837 aa18.46■□□□□ 0.55
CCDC78-212ENST00000482152 DDX39AO00148 427 aaKnown RBP18.45■□□□□ 0.54
CCDC78-212ENST00000482152 BACH1O14867 736 aa18.45■□□□□ 0.54
CCDC78-212ENST00000482152 MARCH6O60337 910 aa18.45■□□□□ 0.54
CCDC78-212ENST00000482152 CYP2C9P11712 490 aa18.45■□□□□ 0.54
CCDC78-212ENST00000482152 U2AF2P26368 475 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC78-212ENST00000482152 GJB2P29033 226 aa18.45■□□□□ 0.54
CCDC78-212ENST00000482152 RFC2P35250 354 aa18.45■□□□□ 0.54
CCDC78-212ENST00000482152 TRAPPC10P48553 1259 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms