RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 SV2CQ496J9 727 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 NAALADL2Q58DX5 795 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 MBLAC2Q68D91 279 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 FAM9AQ8IZU1 332 aaPredicted RBP3.45□□□□□ -1.86
USH2A-204ENST00000481786 PPP1R14AQ96A00 147 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 TSPAN17Q96FV3 270 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 CDK5RAP1Q96SZ6 601 aaKnown RBP3.45□□□□□ -1.86
USH2A-204ENST00000481786 MTA3Q9BTC8 594 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 GPRC5CQ9NQ84 441 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 ST7Q9NRC1 585 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 CLEC1BQ9P126 229 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 SIT1Q9Y3P8 196 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 CARMIL1Q5VZK9 1371 aa3.45□□□□□ -1.86
USH2A-204ENST00000481786 CDK12Q9NYV4 1490 aaPredicted RBP3.45□□□□□ -1.86
USH2A-204ENST00000481786 KIF27Q86VH2 1401 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 ATP10BO94823 1461 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 TRBV23OR9-2A0A075B6M9 112 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 C7orf72A4D263 438 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 NPEPPSL1A6NEC2 478 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 ARNTLO00327 626 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 DDX3XO00571 662 aaKnown RBP eCLIP3.44□□□□□ -1.86
USH2A-204ENST00000481786 SCG5P05408 212 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 RPL13P26373 211 aaKnown RBP3.44□□□□□ -1.86
USH2A-204ENST00000481786 DDR2Q16832 855 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 SLC10A6Q3KNW5 377 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 EEPD1Q7L9B9 569 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 FAM26EQ8N5C1 309 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 LZTR1Q8N653 840 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 NPLOC4Q8TAT6 608 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 FRS2Q8WU20 508 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 BTN2A2Q8WVV5 523 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 DPF3Q92784 378 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 MMP19Q99542 508 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 C11orf84Q9BUA3 381 aaPredicted RBP3.44□□□□□ -1.86
USH2A-204ENST00000481786 EPN3Q9H201 632 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 LRP2BPQ9P2M1 347 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 GULP1Q9UBP9 304 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 RWDD3Q9Y3V2 267 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 HECW1Q76N89 1606 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 AGLP35573 1532 aa3.44□□□□□ -1.86
USH2A-204ENST00000481786 C3P01024 1663 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 CFAP74Q9C0B2 1584 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 HOXC12P31275 282 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 RAB33AQ14088 237 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 SF1Q15637 639 aaKnown RBP3.43□□□□□ -1.86
USH2A-204ENST00000481786 INF2Q27J81 1249 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 FAM26FQ5R3K3 315 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 BORAQ6PGQ7 559 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 CCDC103Q8IW40 242 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 KREMEN2Q8NCW0 462 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 CPA5Q8WXQ8 436 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 C8orf37Q96NL8 207 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 CEP89Q96ST8 783 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 DLL4Q9NR61 685 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.43□□□□□ -1.86
USH2A-204ENST00000481786 TMEFF2Q9UIK5 374 aaPredicted RBP3.43□□□□□ -1.86
USH2A-204ENST00000481786 R3HCC1Q9Y3T6 440 aaKnown RBP3.43□□□□□ -1.86
USH2A-204ENST00000481786 LRRC7Q96NW7 1537 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 FAM135BQ49AJ0 1406 aa3.43□□□□□ -1.86
USH2A-204ENST00000481786 SETBP1Q9Y6X0 1596 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 GOLGA3Q08378 1498 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 RNF17Q9BXT8 1623 aaKnown RBP3.42□□□□□ -1.86
USH2A-204ENST00000481786 A0A1W2PQU0 124 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 MUSKO15146 869 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 NPHS1O60500 1241 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 SNRPB2P08579 225 aaKnown RBP3.42□□□□□ -1.86
USH2A-204ENST00000481786 YY1P25490 414 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 ECI1P42126 302 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 GRIA2P42262 883 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 GFRA1P56159 465 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 DGCR2P98153 550 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 TESK1Q15569 626 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 PRSS53Q2L4Q9 553 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 PRR31Q5SQ13 230 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 E4F1Q66K89 784 aaPredicted RBP3.42□□□□□ -1.86
USH2A-204ENST00000481786 IQCEQ6IPM2 695 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 DENND5AQ6IQ26 1287 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 CIR1Q86X95 450 aaPredicted RBP3.42□□□□□ -1.86
USH2A-204ENST00000481786 PLEKHO2Q8TD55 490 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 CCDC140Q96MF4 163 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 SCAPERQ9BY12 1400 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 REREQ9P2R6 1566 aa3.42□□□□□ -1.86
USH2A-204ENST00000481786 CEP170BQ9Y4F5 1589 aaPredicted RBP3.42□□□□□ -1.86
USH2A-204ENST00000481786 ZMYM3Q14202 1370 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 JCADQ9P266 1359 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 PATE3B3GLJ2 98 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 STK10O94804 968 aaKnown RBP3.41□□□□□ -1.86
USH2A-204ENST00000481786 CPP00450 1065 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 FUCA1P04066 466 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 CYP2C8P10632 490 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 SELENOPP49908 381 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 PPP2R2AP63151 447 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 RBM10P98175 930 aaKnown RBP3.41□□□□□ -1.86
USH2A-204ENST00000481786 FOXE3Q13461 319 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 SLC35F1Q5T1Q4 408 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 ACBD5Q5T8D3 534 aaPredicted RBP3.41□□□□□ -1.86
USH2A-204ENST00000481786 WWC2Q6AWC2 1192 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 CABP7Q86V35 215 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 FAM124AQ86V42 546 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms