RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 TKFCQ3LXA3 575 aa22.02■■□□□ 1.12
CHKB-209ENST00000481673 ZCWPW2Q504Y3 356 aa22.02■■□□□ 1.12
CHKB-209ENST00000481673 TRERF1Q96PN7 1200 aa22.02■■□□□ 1.12
CHKB-209ENST00000481673 TBC1D22BQ9NU19 505 aa22.02■■□□□ 1.12
CHKB-209ENST00000481673 ABHD10Q9NUJ1 306 aa22.02■■□□□ 1.12
CHKB-209ENST00000481673 UBIAD1Q9Y5Z9 338 aa22.02■■□□□ 1.12
CHKB-209ENST00000481673 CCDC175P0C221 793 aa22.01■■□□□ 1.11
CHKB-209ENST00000481673 DSG3P32926 999 aa22.01■■□□□ 1.11
CHKB-209ENST00000481673 HIRAP54198 1017 aaPredicted RBP22.01■■□□□ 1.11
CHKB-209ENST00000481673 PSMC6P62333 389 aa22.01■■□□□ 1.11
CHKB-209ENST00000481673 MAN2A1Q16706 1144 aa22.01■■□□□ 1.11
CHKB-209ENST00000481673 CYP26C1Q6V0L0 522 aa22.01■■□□□ 1.11
CHKB-209ENST00000481673 OR8K1Q8NGG5 319 aa22.01■■□□□ 1.11
CHKB-209ENST00000481673 BHMT2Q9H2M3 363 aa22.01■■□□□ 1.11
CHKB-209ENST00000481673 JADE2Q9NQC1 790 aa22.01■■□□□ 1.11
CHKB-209ENST00000481673 HOXC10Q9NYD6 342 aa22.01■■□□□ 1.11
CHKB-209ENST00000481673 DOCK1Q14185 1865 aa22.01■■□□□ 1.11
CHKB-209ENST00000481673 B4DLN1 442 aa22■■□□□ 1.11
CHKB-209ENST00000481673 ARP10275 920 aa22■■□□□ 1.11
CHKB-209ENST00000481673 ITGB5P18084 799 aa22■■□□□ 1.11
CHKB-209ENST00000481673 KRT9P35527 623 aa22■■□□□ 1.11
CHKB-209ENST00000481673 ETF1P62495 437 aaKnown RBP22■■□□□ 1.11
CHKB-209ENST00000481673 RPS6P62753 249 aaKnown RBP22■■□□□ 1.11
CHKB-209ENST00000481673 CYP4A11Q02928 519 aa22■■□□□ 1.11
CHKB-209ENST00000481673 VWA3BQ502W6 1294 aa22■■□□□ 1.11
CHKB-209ENST00000481673 RNF207Q6ZRF8 634 aa22■■□□□ 1.11
CHKB-209ENST00000481673 LRRC55Q6ZSA7 311 aa22■■□□□ 1.11
CHKB-209ENST00000481673 TPH2Q8IWU9 490 aa22■■□□□ 1.11
CHKB-209ENST00000481673 KCNH7Q9NS40 1196 aa22■■□□□ 1.11
CHKB-209ENST00000481673 TBCAO75347 108 aaKnown RBP22■■□□□ 1.11
CHKB-209ENST00000481673 UBXN2AP68543 259 aa22■■□□□ 1.11
CHKB-209ENST00000481673 SH3D19Q5HYK7 790 aa22■■□□□ 1.11
CHKB-209ENST00000481673 REXO1L1PQ8IX06 675 aa22■■□□□ 1.11
CHKB-209ENST00000481673 ZNF397Q8NF99 534 aaPredicted RBP22■■□□□ 1.11
CHKB-209ENST00000481673 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22■■□□□ 1.11
CHKB-209ENST00000481673 OLFML3Q9NRN5 406 aa22■■□□□ 1.11
CHKB-209ENST00000481673 RGL1Q9NZL6 768 aa22■■□□□ 1.11
CHKB-209ENST00000481673 COL20A1Q9P218 1284 aa22■■□□□ 1.11
CHKB-209ENST00000481673 SEL1LQ9UBV2 794 aa22■■□□□ 1.11
CHKB-209ENST00000481673 A0A1W2PQJ5 194 aa21.99■■□□□ 1.11
CHKB-209ENST00000481673 MAFGO15525 162 aa21.99■■□□□ 1.11
CHKB-209ENST00000481673 MARSP56192 900 aaKnown RBP21.99■■□□□ 1.11
CHKB-209ENST00000481673 MIIPQ5JXC2 388 aa21.99■■□□□ 1.11
CHKB-209ENST00000481673 CATSPERGQ6ZRH7 1159 aa21.99■■□□□ 1.11
CHKB-209ENST00000481673 DYDC2Q96IM9 177 aa21.99■■□□□ 1.11
CHKB-209ENST00000481673 DNAJC7Q99615 494 aa21.99■■□□□ 1.11
CHKB-209ENST00000481673 REEP2Q9BRK0 252 aa21.99■■□□□ 1.11
CHKB-209ENST00000481673 NDST4Q9H3R1 872 aa21.99■■□□□ 1.11
CHKB-209ENST00000481673 AFG3L2Q9Y4W6 797 aa21.99■■□□□ 1.11
CHKB-209ENST00000481673 TRAF5O00463 557 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 RIOK3O14730 519 aaKnown RBP21.98■■□□□ 1.11
CHKB-209ENST00000481673 HMGCS2P54868 508 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 LRRC41Q15345 812 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 MUM1L1Q5H9M0 696 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 RINT1Q6NUQ1 792 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 SCFD1Q8WVM8 642 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 ZNF592Q92610 1267 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 DCPSQ96C86 337 aaKnown RBP21.98■■□□□ 1.11
CHKB-209ENST00000481673 ATG4CQ96DT6 458 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 UNC45AQ9H3U1 944 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 PHLPP2Q6ZVD8 1323 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 TRIM21P19474 475 aaKnown RBP21.98■■□□□ 1.11
CHKB-209ENST00000481673 MTMR1Q13613 665 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 BMT2Q1RMZ1 405 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 ZC3H3Q8IXZ2 948 aaKnown RBP21.98■■□□□ 1.11
CHKB-209ENST00000481673 RMDN3Q96TC7 470 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 FHDC1Q9C0D6 1143 aaPredicted RBP21.98■■□□□ 1.11
CHKB-209ENST00000481673 KCTD10Q9H3F6 313 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 ZHX3Q9H4I2 956 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 ODF2LQ9ULJ1 636 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 TRAF3IP3Q9Y228 551 aa21.98■■□□□ 1.11
CHKB-209ENST00000481673 DICER1Q9UPY3 1922 aaKnown RBP21.97■■□□□ 1.11
CHKB-209ENST00000481673 NPHP3-ACAD11A0A0J9YXS1 232 aa21.97■■□□□ 1.11
CHKB-209ENST00000481673 TTC26A0AVF1 554 aa21.97■■□□□ 1.11
CHKB-209ENST00000481673 PDXKO00764 312 aa21.97■■□□□ 1.11
CHKB-209ENST00000481673 CHMP2AO43633 222 aa21.97■■□□□ 1.11
CHKB-209ENST00000481673 PPP1R12BO60237 982 aaPredicted RBP21.97■■□□□ 1.11
CHKB-209ENST00000481673 P4HBP07237 508 aaKnown RBP21.97■■□□□ 1.11
CHKB-209ENST00000481673 MAP3K9P80192 1104 aa21.97■■□□□ 1.11
CHKB-209ENST00000481673 CTTNQ14247 550 aaKnown RBP21.97■■□□□ 1.11
CHKB-209ENST00000481673 PGM5Q15124 567 aa21.97■■□□□ 1.11
CHKB-209ENST00000481673 KNOP1Q1ED39 458 aaKnown RBP21.97■■□□□ 1.11
CHKB-209ENST00000481673 PRAMEF18Q5VWM3 479 aa21.97■■□□□ 1.11
CHKB-209ENST00000481673 STXBP4Q6ZWJ1 553 aa21.97■■□□□ 1.11
CHKB-209ENST00000481673 EPM2AIP1Q7L775 607 aaPredicted RBP21.97■■□□□ 1.11
CHKB-209ENST00000481673 REPS2Q8NFH8 660 aa21.97■■□□□ 1.11
CHKB-209ENST00000481673 AGO4Q9HCK5 861 aaKnown RBP21.97■■□□□ 1.11
CHKB-209ENST00000481673 HOMER2Q9NSB8 354 aa21.97■■□□□ 1.11
CHKB-209ENST00000481673 RNF146Q9NTX7 359 aa21.97■■□□□ 1.11
CHKB-209ENST00000481673 ZNHIT6Q9NWK9 470 aaKnown RBP21.97■■□□□ 1.11
CHKB-209ENST00000481673 SMCHD1A6NHR9 2005 aa21.96■■□□□ 1.11
CHKB-209ENST00000481673 CETN3O15182 167 aa21.96■■□□□ 1.11
CHKB-209ENST00000481673 USP2O75604 605 aaPredicted RBP21.96■■□□□ 1.11
CHKB-209ENST00000481673 ZBED6P86452 979 aa21.96■■□□□ 1.11
CHKB-209ENST00000481673 SYCP1Q15431 976 aa21.96■■□□□ 1.11
CHKB-209ENST00000481673 C1orf186Q6ZWK4 172 aa21.96■■□□□ 1.11
CHKB-209ENST00000481673 SULF1Q8IWU6 871 aa21.96■■□□□ 1.11
CHKB-209ENST00000481673 PDCD2LQ9BRP1 358 aa21.96■■□□□ 1.11
CHKB-209ENST00000481673 TEX13BQ9BXU2 312 aa21.96■■□□□ 1.11
CHKB-209ENST00000481673 EDEM3Q9BZQ6 932 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms