RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 AK9Q5TCS8 1911 aa21.13■□□□□ 0.97
CCM2-214ENST00000481194 MFSD14CQ5VZR4 134 aa21.13■□□□□ 0.97
CCM2-214ENST00000481194 PADI6Q6TGC4 694 aa21.13■□□□□ 0.97
CCM2-214ENST00000481194 RIT2Q99578 217 aa21.13■□□□□ 0.97
CCM2-214ENST00000481194 EIF2AK1Q9BQI3 630 aaKnown RBP21.13■□□□□ 0.97
CCM2-214ENST00000481194 PCDHA10Q9Y5I2 948 aa21.13■□□□□ 0.97
CCM2-214ENST00000481194 EYA4O95677 639 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 KRT19P08727 400 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 TMEM191BP0C7N4 346 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 CUL4BQ13620 913 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 EXOC3L4Q17RC7 722 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 RDH13Q8NBN7 331 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 SLC9A2Q9UBY0 812 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 RDM1Q8NG50 284 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 LRRC45Q96CN5 670 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 ZFYVE28Q9HCC9 887 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 DDX4Q9NQI0 724 aaKnown RBP21.12■□□□□ 0.97
CCM2-214ENST00000481194 FXR2P51116 673 aaKnown RBP eCLIP21.12■□□□□ 0.97
CCM2-214ENST00000481194 SECISBP2LQ93073 1101 aaKnown RBP21.12■□□□□ 0.97
CCM2-214ENST00000481194 CEP63Q96MT8 703 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 COL18A1P39060 1754 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 LDHAP00338 332 aaKnown RBP21.12■□□□□ 0.97
CCM2-214ENST00000481194 GBP2P32456 591 aaPredicted RBP21.12■□□□□ 0.97
CCM2-214ENST00000481194 MAGEA1P43355 309 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 PPP1R2P3Q6NXS1 205 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 KIAA1586Q9HCI6 787 aa21.12■□□□□ 0.97
CCM2-214ENST00000481194 NBPF3Q9H094 633 aa21.11■□□□□ 0.97
CCM2-214ENST00000481194 DPH6Q7L8W6 267 aa21.11■□□□□ 0.97
CCM2-214ENST00000481194 CERS5Q8N5B7 392 aa21.11■□□□□ 0.97
CCM2-214ENST00000481194 ZNF157P51786 506 aaPredicted RBP21.11■□□□□ 0.97
CCM2-214ENST00000481194 BPIFB4P59827 614 aa21.11■□□□□ 0.97
CCM2-214ENST00000481194 BAATQ14032 418 aaPredicted RBP21.11■□□□□ 0.97
CCM2-214ENST00000481194 SLU7O95391 586 aaKnown RBP21.11■□□□□ 0.97
CCM2-214ENST00000481194 NAPGQ99747 312 aaPredicted RBP21.11■□□□□ 0.97
CCM2-214ENST00000481194 MIS12Q9H081 205 aa21.11■□□□□ 0.97
CCM2-214ENST00000481194 CCL15-CCL14A0A0B4J2E2 113 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 CCL15Q16663 113 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 SEL1L2Q5TEA6 688 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 GPRC5AQ8NFJ5 357 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 CACTINQ8WUQ7 758 aaKnown RBP21.1■□□□□ 0.97
CCM2-214ENST00000481194 LXNQ9BS40 222 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 C2orf40Q9H1Z8 148 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 JPH1Q9HDC5 661 aaPredicted RBP21.1■□□□□ 0.97
CCM2-214ENST00000481194 ANKFY1Q9P2R3 1169 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 CELF2O95319 508 aaKnown RBP21.1■□□□□ 0.97
CCM2-214ENST00000481194 VEGFAP15692 232 aaPredicted RBP21.1■□□□□ 0.97
CCM2-214ENST00000481194 SARM1Q6SZW1 724 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 MFAP3P55082 362 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 SEPT7Q16181 437 aaKnown RBP21.1■□□□□ 0.97
CCM2-214ENST00000481194 NTRK3Q16288 839 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 BANK1Q8NDB2 785 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 ANKRD36BP1Q96IX9 119 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 MXRA8Q9BRK3 442 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 MTUS1Q9ULD2 1270 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 POTEB3A0JP26 581 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 KLRG2A4D1S0 409 aaPredicted RBP21.1■□□□□ 0.97
CCM2-214ENST00000481194 POTECB2RU33 542 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 CXCL11O14625 94 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 POTEBQ6S5H4 581 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 SMAP1Q8IYB5 467 aaPredicted RBP21.1■□□□□ 0.97
CCM2-214ENST00000481194 GOLGA1Q92805 767 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 INO80BQ9C086 356 aaPredicted RBP21.1■□□□□ 0.97
CCM2-214ENST00000481194 IL17RBQ9NRM6 502 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 PPP1R9AQ9ULJ8 1098 aa21.1■□□□□ 0.97
CCM2-214ENST00000481194 LRRC41Q15345 812 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 COASYQ13057 564 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 TAF1CQ15572 869 aaPredicted RBP21.09■□□□□ 0.97
CCM2-214ENST00000481194 HOOK3Q86VS8 718 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 GPRASP2Q96D09 838 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 MTRQ99707 1265 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 INO80B-WBP1J3KQ70 363 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 OAZ1P54368 228 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 CACNB1Q02641 598 aaPredicted RBP21.09■□□□□ 0.97
CCM2-214ENST00000481194 ACER1Q8TDN7 264 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 MKL1Q969V6 931 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 GPRC5DQ9NZD1 345 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 FAM198AQ9UFP1 575 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 UBL4BQ8N7F7 174 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 NT5C1BQ96P26 610 aa21.09■□□□□ 0.97
CCM2-214ENST00000481194 FERP16591 822 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 GCLCP48506 637 aaPredicted RBP21.08■□□□□ 0.97
CCM2-214ENST00000481194 TNNC1P63316 161 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 NAALADL2Q58DX5 795 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 NBPF12Q5TAG4 269 aaPredicted RBP21.08■□□□□ 0.97
CCM2-214ENST00000481194 SMYD4Q8IYR2 804 aaPredicted RBP21.08■□□□□ 0.97
CCM2-214ENST00000481194 ATG4CQ96DT6 458 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 ODF2LQ9ULJ1 636 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 E9PMD0 336 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 FGRP09769 529 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 MUTP22033 750 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 SMC1AQ14683 1233 aaKnown RBP21.08■□□□□ 0.97
CCM2-214ENST00000481194 GAS2L3Q86XJ1 694 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 TMEM110-MUSTN1A8MSY1 372 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 NR3C2P08235 984 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 C5P01031 1676 aa21.08■□□□□ 0.97
CCM2-214ENST00000481194 DDNO94850 711 aaPredicted RBP21.08■□□□□ 0.96
CCM2-214ENST00000481194 PIK3CAP42336 1068 aa21.08■□□□□ 0.96
CCM2-214ENST00000481194 ZKSCAN4Q969J2 545 aaPredicted RBP21.08■□□□□ 0.96
CCM2-214ENST00000481194 GABBR1Q9UBS5 961 aa21.08■□□□□ 0.96
CCM2-214ENST00000481194 PRAMEF18Q5VWM3 479 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms