RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 NUP160Q12769 1436 aa6.33□□□□□ -1.4
CHCHD3-205ENST00000481152 PRDM15P57071 1507 aaPredicted RBP6.33□□□□□ -1.4
CHCHD3-205ENST00000481152 ENPP3O14638 875 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 NTRK1P04629 796 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 SCG5P05408 212 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 NCAM1P13591 858 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 PMLP29590 882 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 ECI1P42126 302 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 RRP1P56182 461 aaKnown RBP6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 RHBDL3P58872 404 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 SLC9A5Q14940 896 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 VMACQ2NL98 169 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 SLC10A6Q3KNW5 377 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 C4orf46Q504U0 113 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 E4F1Q66K89 784 aaPredicted RBP6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 IQCEQ6IPM2 695 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 TSHZ1Q6ZSZ6 1077 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 ANKS3Q6ZW76 656 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 FMNL3Q8IVF7 1028 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 CCDC103Q8IW40 242 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 CELF2-AS1Q8N7Q2 184 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 EPN3Q9H201 632 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 BTG4Q9NY30 223 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 ABCA8O94911 1581 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 SYNJ2O15056 1496 aa6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 RNF17Q9BXT8 1623 aaKnown RBP6.32□□□□□ -1.4
CHCHD3-205ENST00000481152 ZBTB7AO95365 584 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 HOXA5P20719 270 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 MC3RP41968 323 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 FOXO4P98177 505 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 KCNAB2Q13303 367 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 SF1Q15637 639 aaKnown RBP6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 ZFYVE27Q5T4F4 411 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 LILRA6Q6PI73 481 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 LINC01356Q8N9X3 169 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 KREMEN2Q8NCW0 462 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 DIO2Q92813 273 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 CCDC140Q96MF4 163 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 ST7Q9NRC1 585 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 TMEFF2Q9UIK5 374 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 SIT1Q9Y3P8 196 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 VIRMAQ69YN4 1812 aaKnown RBP6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 KRTAP9-7A8MTY7 169 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 ARNTLO00327 626 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 MEFVO15553 781 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 KLF4O43474 513 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 PLXNC1O60486 1568 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 CPP00450 1065 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 KCNJ6P48051 423 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 GFRA1P56159 465 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 RPL11P62913 178 aaKnown RBP6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 CAP1Q01518 475 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 BIRC2Q13490 618 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 DDR2Q16832 855 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 PRSS53Q2L4Q9 553 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 ACBD5Q5T8D3 534 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 C9orf84Q5VXU9 1444 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 B3GNT8Q7Z7M8 397 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 DCP2Q8IU60 420 aaKnown RBP6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 JDP2Q8WYK2 163 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 RPS6KC1Q96S38 1066 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 MAF1Q9H063 256 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 PNMA2Q9UL42 364 aa6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 TIMM13Q9Y5L4 95 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3-205ENST00000481152 ZNF608Q9ULD9 1512 aaPredicted RBP6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 PREX2Q70Z35 1606 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 IQGAP3Q86VI3 1631 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 PRAG1Q86YV5 1406 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 C22orf46C9J442 243 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 AGRPO00253 132 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 FFAR3O14843 346 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 PRC1O43663 620 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 CAPNS1P04632 268 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 FPR2P25090 351 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 TESK1Q15569 626 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 PPIL6Q8IXY8 311 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 SP8Q8IXZ3 490 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 Q8N1Y9 231 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 TP53I13Q8NBR0 393 aaPredicted RBP6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 TMEM145Q8NBT3 493 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 FNIP1Q8TF40 1166 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 CPA5Q8WXQ8 436 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 AP5M1Q9H0R1 490 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 CFDP1Q9UEE9 299 aaPredicted RBP6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 RCAN3Q9UKA8 241 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 PMF1-BGLAPU3KQ54 211 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 ADAMTS20P59510 1910 aa6.3□□□□□ -1.4
CHCHD3-205ENST00000481152 CCDC141Q6ZP82 1450 aa6.29□□□□□ -1.4
CHCHD3-205ENST00000481152 MAGI2Q86UL8 1455 aa6.29□□□□□ -1.4
CHCHD3-205ENST00000481152 MYO5CQ9NQX4 1742 aa6.29□□□□□ -1.4
CHCHD3-205ENST00000481152 NEURL4Q96JN8 1562 aa6.29□□□□□ -1.4
CHCHD3-205ENST00000481152 PRG4Q92954 1404 aaPredicted RBP6.29□□□□□ -1.4
CHCHD3-205ENST00000481152 FAM135AQ9P2D6 1515 aa6.29□□□□□ -1.4
CHCHD3-205ENST00000481152 MYO1BO43795 1136 aa6.29□□□□□ -1.4
CHCHD3-205ENST00000481152 SASH1O94885 1247 aa6.29□□□□□ -1.4
CHCHD3-205ENST00000481152 PDGFRBP09619 1106 aa6.29□□□□□ -1.4
CHCHD3-205ENST00000481152 LTBRP36941 435 aa6.29□□□□□ -1.4
CHCHD3-205ENST00000481152 BCL6P41182 706 aa6.29□□□□□ -1.4
CHCHD3-205ENST00000481152 GRIA2P42262 883 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms