RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 ZCCHC8Q6NZY4 707 aaKnown RBP8.38□□□□□ -1.07
GTF3C3-211ENST00000481098 GIMAP6Q6P9H5 292 aa8.38□□□□□ -1.07
GTF3C3-211ENST00000481098 PROSER1Q86XN7 944 aa8.38□□□□□ -1.07
GTF3C3-211ENST00000481098 RBM12BQ8IXT5 1001 aaKnown RBP8.38□□□□□ -1.07
GTF3C3-211ENST00000481098 TTLL6Q8N841 843 aa8.38□□□□□ -1.07
GTF3C3-211ENST00000481098 CD244Q9BZW8 370 aa8.38□□□□□ -1.07
GTF3C3-211ENST00000481098 PLAAQ9Y263 795 aa8.38□□□□□ -1.07
GTF3C3-211ENST00000481098 ACOT7O00154 380 aa8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 CLASP2O75122 1294 aaKnown RBP8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 SDSP20132 328 aa8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 FZD5Q13467 585 aa8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 TMEM177Q53S58 311 aa8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 PLEKHG4Q58EX7 1191 aa8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 SPOCD1Q6ZMY3 1216 aa8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 PTRH1Q86Y79 214 aaKnown RBP8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 IGSF22Q8N9C0 903 aa8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 TP53I13Q8NBR0 393 aaPredicted RBP8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 NINJ1Q92982 152 aa8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 ZBTB8AQ96BR9 441 aa8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 TMEM209Q96SK2 561 aa8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 SPATA6Q9NWH7 488 aaPredicted RBP8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 WASF3Q9UPY6 502 aa8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 TMA7Q9Y2S6 64 aaKnown RBP8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 TNPO3Q9Y5L0 923 aaKnown RBP8.37□□□□□ -1.07
GTF3C3-211ENST00000481098 PTPN1P18031 435 aaKnown RBP8.36□□□□□ -1.07
GTF3C3-211ENST00000481098 THBS2P35442 1172 aa8.36□□□□□ -1.07
GTF3C3-211ENST00000481098 MECP2P51608 486 aaKnown RBP8.36□□□□□ -1.07
GTF3C3-211ENST00000481098 GRIN1Q05586 938 aa8.36□□□□□ -1.07
GTF3C3-211ENST00000481098 ADAM9Q13443 819 aa8.36□□□□□ -1.07
GTF3C3-211ENST00000481098 OTOP1Q7RTM1 612 aa8.36□□□□□ -1.07
GTF3C3-211ENST00000481098 DDX53Q86TM3 631 aaKnown RBP8.36□□□□□ -1.07
GTF3C3-211ENST00000481098 NOSTRINQ8IVI9 506 aa8.36□□□□□ -1.07
GTF3C3-211ENST00000481098 CISD2Q8N5K1 135 aaKnown RBP8.36□□□□□ -1.07
GTF3C3-211ENST00000481098 SYT3Q9BQG1 590 aa8.36□□□□□ -1.07
GTF3C3-211ENST00000481098 ATP23Q9Y6H3 246 aa8.36□□□□□ -1.07
GTF3C3-211ENST00000481098 FAM90A27PA6NNH2 459 aa8.35□□□□□ -1.07
GTF3C3-211ENST00000481098 KRT15P19012 456 aa8.35□□□□□ -1.07
GTF3C3-211ENST00000481098 ZNF460Q14592 562 aa8.35□□□□□ -1.07
GTF3C3-211ENST00000481098 PRR31Q5SQ13 230 aa8.35□□□□□ -1.07
GTF3C3-211ENST00000481098 ORAI3Q9BRQ5 295 aa8.35□□□□□ -1.07
GTF3C3-211ENST00000481098 ARID1BQ8NFD5 2236 aaPredicted RBP8.35□□□□□ -1.07
GTF3C3-211ENST00000481098 OPA1O60313 960 aa8.34□□□□□ -1.07
GTF3C3-211ENST00000481098 POU3F2P20265 443 aaPredicted RBP8.34□□□□□ -1.07
GTF3C3-211ENST00000481098 CD276Q5ZPR3 534 aa8.34□□□□□ -1.07
GTF3C3-211ENST00000481098 LIPIQ6XZB0 460 aa8.34□□□□□ -1.07
GTF3C3-211ENST00000481098 ZNF526Q8TF50 670 aaPredicted RBP8.34□□□□□ -1.07
GTF3C3-211ENST00000481098 WRNIP1Q96S55 665 aa8.34□□□□□ -1.07
GTF3C3-211ENST00000481098 SAMD15Q9P1V8 674 aa8.34□□□□□ -1.07
GTF3C3-211ENST00000481098 FAM83GA6ND36 823 aa8.33□□□□□ -1.08
GTF3C3-211ENST00000481098 GLRX3O76003 335 aaKnown RBP8.33□□□□□ -1.08
GTF3C3-211ENST00000481098 RPL13P26373 211 aaKnown RBP8.33□□□□□ -1.08
GTF3C3-211ENST00000481098 SMAD4Q13485 552 aaKnown RBP8.33□□□□□ -1.08
GTF3C3-211ENST00000481098 DALRD3Q5D0E6 543 aaKnown RBP8.33□□□□□ -1.08
GTF3C3-211ENST00000481098 BTBD8Q5XKL5 378 aa8.33□□□□□ -1.08
GTF3C3-211ENST00000481098 DTX3Q8N9I9 347 aa8.33□□□□□ -1.08
GTF3C3-211ENST00000481098 LUC7LQ9NQ29 371 aaKnown RBP8.33□□□□□ -1.08
GTF3C3-211ENST00000481098 DLL4Q9NR61 685 aa8.33□□□□□ -1.08
GTF3C3-211ENST00000481098 NTMQ9P121 344 aa8.33□□□□□ -1.08
GTF3C3-211ENST00000481098 SLC12A8A0AV02 714 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 SMARCA5O60264 1052 aaPredicted RBP8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 TRIM13O60858 407 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 C4BPAP04003 597 aaKnown RBP8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 FLT3P36888 993 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 HERVK_113P62684 666 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 DBPQ10586 325 aaPredicted RBP8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 RTP5Q14D33 572 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 VASNQ6EMK4 673 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 KRTAP1-3Q8IUG1 177 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 NIM1KQ8IY84 436 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 CARFQ8N187 725 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 DLG3Q92796 817 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 CLIC6Q96NY7 704 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 B3GALT1Q9Y5Z6 326 aa8.32□□□□□ -1.08
GTF3C3-211ENST00000481098 ZNF839A8K0R7 811 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 CYP7B1O75881 506 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 ENO2P09104 434 aaPredicted RBP8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 HSD3B2P26439 372 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 SEC23AQ15436 765 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 ARHGAP44Q17R89 818 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 SDE2Q6IQ49 451 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 TTLL7Q6ZT98 887 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 EP400NLQ6ZTU2 488 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 SP8Q8IXZ3 490 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 MARCH10Q8NA82 808 aaPredicted RBP8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 CHST14Q8NCH0 376 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 MFSD3Q96ES6 412 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 KCNC2Q96PR1 638 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 BOCQ9BWV1 1114 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 RIC8BQ9NVN3 520 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 RBPJLQ9UBG7 517 aa8.31□□□□□ -1.08
GTF3C3-211ENST00000481098 M0R2C6 588 aa8.3□□□□□ -1.08
GTF3C3-211ENST00000481098 CBX4O00257 560 aa8.3□□□□□ -1.08
GTF3C3-211ENST00000481098 TRAF5O00463 557 aa8.3□□□□□ -1.08
GTF3C3-211ENST00000481098 CHGBP05060 677 aa8.3□□□□□ -1.08
GTF3C3-211ENST00000481098 JMJD7P0C870 316 aa8.3□□□□□ -1.08
GTF3C3-211ENST00000481098 ZBTB48P10074 688 aaPredicted RBP8.3□□□□□ -1.08
GTF3C3-211ENST00000481098 SLURP1P55000 103 aa8.3□□□□□ -1.08
GTF3C3-211ENST00000481098 TM4SF20Q53R12 229 aa8.3□□□□□ -1.08
GTF3C3-211ENST00000481098 FSTL4Q6MZW2 842 aa8.3□□□□□ -1.08
GTF3C3-211ENST00000481098 TMC5Q6UXY8 1006 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms