RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 IFRD2Q12894 506 aaPredicted RBP4.87□□□□□ -1.63
FN1-221ENST00000480737 CDSNQ15517 529 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 SMAD2Q15796 467 aaKnown RBP4.87□□□□□ -1.63
FN1-221ENST00000480737 KCTD1Q719H9 257 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.87□□□□□ -1.63
FN1-221ENST00000480737 REXO1L1PQ8IX06 675 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 NUDT10Q8NFP7 164 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 IGDCC4Q8TDY8 1250 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 SH3RF2Q8TEC5 729 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 DVL3Q92997 716 aaPredicted RBP4.87□□□□□ -1.63
FN1-221ENST00000480737 NUDT11Q96G61 164 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 GPR20Q99678 358 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 KATNBL1Q9H079 304 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 CROTQ9UKG9 612 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 DSEQ9UL01 958 aa4.87□□□□□ -1.63
FN1-221ENST00000480737 TCRBV5S4A2TA0A5A2 114 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 BLACEA4D250 179 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 PATE3B3GLJ2 98 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 ACOT7O00154 380 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 ARVCFO00192 962 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 PDPK1O15530 556 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 LTFP02788 710 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 PPP2CBP62714 309 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 PPP2CAP67775 309 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 LONRF2Q1L5Z9 754 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 SKIDA1Q1XH10 827 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 SLFN13Q68D06 897 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 TRMT10BQ6PF06 316 aaKnown RBP4.86□□□□□ -1.63
FN1-221ENST00000480737 GLB1LQ6UWU2 654 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 Q6ZUG5 572 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 SPATC1Q76KD6 591 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 SCUBE1Q8IWY4 988 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 KBTBD2Q8IY47 623 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 CKAP2LQ8IYA6 745 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 LOXL4Q96JB6 756 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 IPPKQ9H8X2 491 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 BARX1Q9HBU1 254 aaPredicted RBP4.86□□□□□ -1.63
FN1-221ENST00000480737 TSC22D4Q9Y3Q8 395 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 SLC4A7Q9Y6M7 1214 aa4.86□□□□□ -1.63
FN1-221ENST00000480737 AQP7O14520 342 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 IL18BPO95998 194 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 ENO2P09104 434 aaPredicted RBP4.85□□□□□ -1.63
FN1-221ENST00000480737 CSF2RBP32927 897 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 GRIN1Q05586 938 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 SERINC3Q13530 473 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 ICAM4Q14773 271 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 R3HDM1Q15032 1099 aaKnown RBP4.85□□□□□ -1.63
FN1-221ENST00000480737 LIMS2Q7Z4I7 341 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 ZBTB38Q8NAP3 1195 aaPredicted RBP4.85□□□□□ -1.63
FN1-221ENST00000480737 PTPRN2Q92932 1015 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 ARMC5Q96C12 935 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 C8orf37Q96NL8 207 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 ALG1Q9BT22 464 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 TRIM55Q9BYV6 548 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 SEC61A2Q9H9S3 476 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 ZFP69BQ9UJL9 534 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 SRPK3Q9UPE1 567 aa4.85□□□□□ -1.63
FN1-221ENST00000480737 ZNF536O15090 1300 aa4.84□□□□□ -1.63
FN1-221ENST00000480737 STK10O94804 968 aaKnown RBP4.84□□□□□ -1.63
FN1-221ENST00000480737 CNOT4O95628 575 aaKnown RBP4.84□□□□□ -1.63
FN1-221ENST00000480737 CKMP06732 381 aa4.84□□□□□ -1.63
FN1-221ENST00000480737 COL6A2P12110 1019 aa4.84□□□□□ -1.63
FN1-221ENST00000480737 RBM25P49756 843 aaKnown RBP4.84□□□□□ -1.63
FN1-221ENST00000480737 SUMO1P63165 101 aaKnown RBP4.84□□□□□ -1.63
FN1-221ENST00000480737 PFKPQ01813 784 aa4.84□□□□□ -1.63
FN1-221ENST00000480737 PUM1Q14671 1186 aaKnown RBP eCLIP4.84□□□□□ -1.63
FN1-221ENST00000480737 NAALADL2Q58DX5 795 aa4.84□□□□□ -1.63
FN1-221ENST00000480737 ARHGEF18Q6ZSZ5 1173 aa4.84□□□□□ -1.63
FN1-221ENST00000480737 LRP10Q7Z4F1 713 aa4.84□□□□□ -1.63
FN1-221ENST00000480737 CIR1Q86X95 450 aaPredicted RBP4.84□□□□□ -1.63
FN1-221ENST00000480737 RBM12BQ8IXT5 1001 aaKnown RBP4.84□□□□□ -1.63
FN1-221ENST00000480737 WWC2-AS2Q96NR7 200 aa4.84□□□□□ -1.63
FN1-221ENST00000480737 TRBV23-1A0A0A0MS06 115 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 AMY2AP04746 511 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 NAT1P18440 290 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 AMY2BP19961 511 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 DBPQ10586 325 aaPredicted RBP4.83□□□□□ -1.64
FN1-221ENST00000480737 RASA3Q14644 834 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 GPR19Q15760 415 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 FIGNQ5HY92 759 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 FOXB2Q5VYV0 432 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 RALYLQ86SE5 291 aaKnown RBP4.83□□□□□ -1.64
FN1-221ENST00000480737 NLGN4XQ8N0W4 816 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 JMYQ8N9B5 988 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 PCDH19Q8TAB3 1148 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 EXOC2Q96KP1 924 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 KCNJ15Q99712 375 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 TMPRSS5Q9H3S3 457 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 SIRPGQ9P1W8 387 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 ARHGAP20Q9P2F6 1191 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 ST6GALNAC2Q9UJ37 374 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 TRAF6Q9Y4K3 522 aa4.83□□□□□ -1.64
FN1-221ENST00000480737 NPEPPSL1A6NEC2 478 aa4.82□□□□□ -1.64
FN1-221ENST00000480737 ZNF561-AS1K7EIQ3 104 aa4.82□□□□□ -1.64
FN1-221ENST00000480737 GJA4P35212 333 aa4.82□□□□□ -1.64
FN1-221ENST00000480737 GABREP78334 506 aa4.82□□□□□ -1.64
FN1-221ENST00000480737 PAK1Q13153 545 aa4.82□□□□□ -1.64
FN1-221ENST00000480737 TOP3AQ13472 1001 aaPredicted RBP4.82□□□□□ -1.64
FN1-221ENST00000480737 MTERF2Q49AM1 385 aa4.82□□□□□ -1.64
FN1-221ENST00000480737 ZC3H12BQ5HYM0 836 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms