RNA–Protein interactions for RNA: ENST00000480438.1

HUWE1-211, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-211ENST00000480438 FAM26DQ5JW98 314 aa16.37■□□□□ 0.21
HUWE1-211ENST00000480438 MYSM1Q5VVJ2 828 aa16.37■□□□□ 0.21
HUWE1-211ENST00000480438 CWF19L1Q69YN2 538 aaKnown RBP16.37■□□□□ 0.21
HUWE1-211ENST00000480438 ANKRD54Q6NXT1 300 aa16.37■□□□□ 0.21
HUWE1-211ENST00000480438 CMTR2Q8IYT2 770 aaKnown RBP16.37■□□□□ 0.21
HUWE1-211ENST00000480438 DCLK2Q8N568 766 aa16.37■□□□□ 0.21
HUWE1-211ENST00000480438 DTWD2Q8NBA8 298 aa16.37■□□□□ 0.21
HUWE1-211ENST00000480438 CYP2W1Q8TAV3 490 aa16.37■□□□□ 0.21
HUWE1-211ENST00000480438 SYTL5Q8TDW5 730 aaPredicted RBP16.37■□□□□ 0.21
HUWE1-211ENST00000480438 RMDN3Q96TC7 470 aa16.37■□□□□ 0.21
HUWE1-211ENST00000480438 SETD4Q9NVD3 440 aa16.37■□□□□ 0.21
HUWE1-211ENST00000480438 CDH22Q9UJ99 828 aa16.37■□□□□ 0.21
HUWE1-211ENST00000480438 CHD6Q8TD26 2715 aa16.37■□□□□ 0.21
HUWE1-211ENST00000480438 MAP1BP46821 2468 aaKnown RBP16.36■□□□□ 0.21
HUWE1-211ENST00000480438 CFAP47Q6ZTR5 3102 aa16.36■□□□□ 0.21
HUWE1-211ENST00000480438 H3BRB1 525 aa16.36■□□□□ 0.21
HUWE1-211ENST00000480438 PPARAQ07869 468 aa16.36■□□□□ 0.21
HUWE1-211ENST00000480438 COL9A2Q14055 689 aaPredicted RBP16.36■□□□□ 0.21
HUWE1-211ENST00000480438 CELF3Q5SZQ8 465 aaKnown RBP16.36■□□□□ 0.21
HUWE1-211ENST00000480438 APPBP2Q92624 585 aa16.36■□□□□ 0.21
HUWE1-211ENST00000480438 CDCA3Q99618 268 aaPredicted RBP16.36■□□□□ 0.21
HUWE1-211ENST00000480438 TUT1Q9H6E5 874 aaKnown RBP16.36■□□□□ 0.21
HUWE1-211ENST00000480438 RALYQ9UKM9 306 aaKnown RBP16.36■□□□□ 0.21
HUWE1-211ENST00000480438 WDR19Q8NEZ3 1342 aa16.36■□□□□ 0.21
HUWE1-211ENST00000480438 NPR3P17342 541 aa16.35■□□□□ 0.21
HUWE1-211ENST00000480438 EIF2AK2P19525 551 aaKnown RBP16.35■□□□□ 0.21
HUWE1-211ENST00000480438 AOC1P19801 751 aa16.35■□□□□ 0.21
HUWE1-211ENST00000480438 ARHGEF16Q5VV41 709 aa16.35■□□□□ 0.21
HUWE1-211ENST00000480438 LLGL2Q6P1M3 1020 aa16.35■□□□□ 0.21
HUWE1-211ENST00000480438 TMEM184AQ6ZMB5 413 aa16.35■□□□□ 0.21
HUWE1-211ENST00000480438 FSD2A1L4K1 749 aa16.34■□□□□ 0.21
HUWE1-211ENST00000480438 M0R2C6 588 aa16.34■□□□□ 0.21
HUWE1-211ENST00000480438 GGPS1O95749 300 aa16.34■□□□□ 0.21
HUWE1-211ENST00000480438 NR3C2P08235 984 aa16.34■□□□□ 0.21
HUWE1-211ENST00000480438 SRGAP2BP0DMP2 458 aa16.34■□□□□ 0.21
HUWE1-211ENST00000480438 ERVFC1P60507 584 aa16.34■□□□□ 0.21
HUWE1-211ENST00000480438 KCNC3Q14003 757 aa16.34■□□□□ 0.21
HUWE1-211ENST00000480438 LPIN1Q14693 890 aa16.34■□□□□ 0.21
HUWE1-211ENST00000480438 FTSJ3Q8IY81 847 aaKnown RBP16.34■□□□□ 0.21
HUWE1-211ENST00000480438 NACAP1Q9BZK3 213 aa16.34■□□□□ 0.21
HUWE1-211ENST00000480438 EHMT1Q9H9B1 1298 aa16.34■□□□□ 0.21
HUWE1-211ENST00000480438 LIMD1Q9UGP4 676 aa16.34■□□□□ 0.21
HUWE1-211ENST00000480438 SUPT16HQ9Y5B9 1047 aaKnown RBP16.34■□□□□ 0.21
HUWE1-211ENST00000480438 RANBP6O60518 1105 aaKnown RBP16.33■□□□□ 0.2
HUWE1-211ENST00000480438 GNAT1P11488 350 aa16.33■□□□□ 0.2
HUWE1-211ENST00000480438 RLBP1P12271 317 aa16.33■□□□□ 0.2
HUWE1-211ENST00000480438 NOVP48745 357 aa16.33■□□□□ 0.2
HUWE1-211ENST00000480438 RUBCNQ92622 972 aa16.33■□□□□ 0.2
HUWE1-211ENST00000480438 NAPBQ9H115 298 aa16.33■□□□□ 0.2
HUWE1-211ENST00000480438 POMKQ9H5K3 350 aa16.33■□□□□ 0.2
HUWE1-211ENST00000480438 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
HUWE1-211ENST00000480438 OTOGLQ3ZCN5 2332 aa16.33■□□□□ 0.2
HUWE1-211ENST00000480438 RNF113AO15541 343 aaKnown RBP16.32■□□□□ 0.2
HUWE1-211ENST00000480438 LGALS2P05162 132 aa16.32■□□□□ 0.2
HUWE1-211ENST00000480438 GATMP50440 423 aa16.32■□□□□ 0.2
HUWE1-211ENST00000480438 TTC3P53804 2025 aa16.32■□□□□ 0.2
HUWE1-211ENST00000480438 SP2Q02086 613 aa16.32■□□□□ 0.2
HUWE1-211ENST00000480438 UBE3AQ05086 875 aa16.32■□□□□ 0.2
HUWE1-211ENST00000480438 CTDSPL2Q05D32 466 aa16.32■□□□□ 0.2
HUWE1-211ENST00000480438 RTN4RL1Q86UN2 441 aaPredicted RBP16.32■□□□□ 0.2
HUWE1-211ENST00000480438 CRIPAKQ8N1N5 446 aa16.32■□□□□ 0.2
HUWE1-211ENST00000480438 TMEM47Q9BQJ4 181 aa16.32■□□□□ 0.2
HUWE1-211ENST00000480438 RTP3Q9BQQ7 232 aa16.32■□□□□ 0.2
HUWE1-211ENST00000480438 PDHBP11177 359 aa16.31■□□□□ 0.2
HUWE1-211ENST00000480438 TOP1P11387 765 aaKnown RBP16.31■□□□□ 0.2
HUWE1-211ENST00000480438 HOXB8P17481 243 aaPredicted RBP16.31■□□□□ 0.2
HUWE1-211ENST00000480438 ARHGAP4P98171 946 aa16.31■□□□□ 0.2
HUWE1-211ENST00000480438 KBTBD3Q8NAB2 608 aa16.31■□□□□ 0.2
HUWE1-211ENST00000480438 LINC01599Q8WXQ3 324 aa16.31■□□□□ 0.2
HUWE1-211ENST00000480438 MLXIPQ9HAP2 919 aa16.31■□□□□ 0.2
HUWE1-211ENST00000480438 PCDHB12Q9Y5F1 795 aa16.31■□□□□ 0.2
HUWE1-211ENST00000480438 MYCLP12524 364 aaPredicted RBP16.3■□□□□ 0.2
HUWE1-211ENST00000480438 ATXN1P54253 815 aaKnown RBP16.3■□□□□ 0.2
HUWE1-211ENST00000480438 ADAM17P78536 824 aa16.3■□□□□ 0.2
HUWE1-211ENST00000480438 ZNF543Q08ER8 600 aa16.3■□□□□ 0.2
HUWE1-211ENST00000480438 SPOUT1Q5T280 376 aaKnown RBP16.3■□□□□ 0.2
HUWE1-211ENST00000480438 PDE12Q6L8Q7 609 aaKnown RBP16.3■□□□□ 0.2
HUWE1-211ENST00000480438 CES5AQ6NT32 575 aa16.3■□□□□ 0.2
HUWE1-211ENST00000480438 NPAS4Q8IUM7 802 aa16.3■□□□□ 0.2
HUWE1-211ENST00000480438 RIN2Q8WYP3 895 aaPredicted RBP16.3■□□□□ 0.2
HUWE1-211ENST00000480438 BCAS3Q9H6U6 928 aa16.3■□□□□ 0.2
HUWE1-211ENST00000480438 PXMP2Q9NR77 195 aa16.3■□□□□ 0.2
HUWE1-211ENST00000480438 TMEM260Q9NX78 707 aa16.3■□□□□ 0.2
HUWE1-211ENST00000480438 MYH7P12883 1935 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 FSCN2O14926 492 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 RAB11FIP3O75154 756 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 FGF18O76093 207 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 WEE2P0C1S8 567 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 UBA1P22314 1058 aaKnown RBP16.29■□□□□ 0.2
HUWE1-211ENST00000480438 MGAT3Q09327 533 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 APOBRQ0VD83 1088 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 FBXO47Q5MNV8 452 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 KIAA0319Q5VV43 1072 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 PLPP4Q5VZY2 271 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 KCNV1Q6PIU1 500 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 RUFY4Q6ZNE9 571 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 MCF2L2Q86YR7 1114 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 ZDHHC14Q8IZN3 488 aa16.29■□□□□ 0.2
HUWE1-211ENST00000480438 TDRD5Q8NAT2 981 aaKnown RBP16.29■□□□□ 0.2
HUWE1-211ENST00000480438 RASGRP4Q8TDF6 673 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms