RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 TRIML1Q8N9V2 468 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 NSUN6Q8TEA1 469 aaKnown RBP11.7□□□□□ -0.54
LINC00173-203ENST00000480237 PNMA5Q96PV4 448 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 PURBQ96QR8 312 aaKnown RBP11.7□□□□□ -0.54
LINC00173-203ENST00000480237 TEKT3Q9BXF9 490 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 MOV10L1Q9BXT6 1211 aaKnown RBP11.7□□□□□ -0.54
LINC00173-203ENST00000480237 BLZF1Q9H2G9 400 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 VAV3Q9UKW4 847 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 SLC45A1Q9Y2W3 748 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 BTBD19C9JJ37 291 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 GOLGA6L19H0YKK7 550 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 CHMP2AO43633 222 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 ARP10275 920 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 BCRP11274 1271 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 ITGB5P18084 799 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 ERVK-9P63128 1117 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 ERVK-24P63145 666 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 MRPS9P82933 396 aaKnown RBP11.69□□□□□ -0.54
LINC00173-203ENST00000480237 SPIRE1Q08AE8 756 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 DPYDQ12882 1025 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 MTMR1Q13613 665 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 CUL4BQ13620 913 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 DHX8Q14562 1220 aaKnown RBP11.69□□□□□ -0.54
LINC00173-203ENST00000480237 TMEM119Q4V9L6 283 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 NT5DC1Q5TFE4 455 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 WDR78Q5VTH9 848 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 XRRA1Q6P2D8 792 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 ANKRD23Q86SG2 305 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 LUZP1Q86V48 1076 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 BRI3BPQ8WY22 251 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 LARP4BQ92615 738 aaKnown RBP11.69□□□□□ -0.54
LINC00173-203ENST00000480237 WDR11Q9BZH6 1224 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 TXNRD2Q9NNW7 524 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 PKD2L1Q9P0L9 805 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 TCEAL9Q9UHQ7 104 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 DACH1Q9UI36 760 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 UBIAD1Q9Y5Z9 338 aa11.69□□□□□ -0.54
LINC00173-203ENST00000480237 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 BECN2A8MW95 431 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 DDX39AO00148 427 aaKnown RBP11.68□□□□□ -0.54
LINC00173-203ENST00000480237 IPO5O00410 1097 aaKnown RBP11.68□□□□□ -0.54
LINC00173-203ENST00000480237 GPR37O15354 613 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 MYL1P05976 194 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 CYP2C8P10632 490 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 ERCC3P19447 782 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 ZNF157P51786 506 aaPredicted RBP11.68□□□□□ -0.54
LINC00173-203ENST00000480237 PRSS12P56730 875 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 AMPD3Q01432 767 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 PPP2R5CQ13362 524 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 RASAL3Q86YV0 1011 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 AOPEPQ8N6M6 819 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 LRRC15Q8TF66 581 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 RAD54LQ92698 747 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 CCDC47Q96A33 483 aaKnown RBP11.68□□□□□ -0.54
LINC00173-203ENST00000480237 GSDMAQ96QA5 445 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 JADE2Q9NQC1 790 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 KBTBD4Q9NVX7 518 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 RMND1Q9NWS8 449 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 RBPJLQ9UBG7 517 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 VPS9D1Q9Y2B5 631 aa11.68□□□□□ -0.54
LINC00173-203ENST00000480237 PSMD10O75832 226 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 RPN1P04843 607 aaKnown RBP11.67□□□□□ -0.54
LINC00173-203ENST00000480237 NR3C2P08235 984 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 SARSP49591 514 aaKnown RBP11.67□□□□□ -0.54
LINC00173-203ENST00000480237 ASIC1P78348 528 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 CCNA1P78396 465 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 MORC3Q14149 939 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 MCM6Q14566 821 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 HYIQ5T013 277 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 ADGRD1Q6QNK2 874 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 NLRX1Q86UT6 975 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 DNERQ8NFT8 737 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 SPATA20Q8TB22 786 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 PARK7Q99497 189 aaKnown RBP11.67□□□□□ -0.54
LINC00173-203ENST00000480237 MMP19Q99542 508 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 MTRQ99707 1265 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 AGO4Q9HCK5 861 aaKnown RBP11.67□□□□□ -0.54
LINC00173-203ENST00000480237 KCNH7Q9NS40 1196 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 BLOC1S4Q9NUP1 217 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 ADD3Q9UEY8 706 aaKnown RBP11.67□□□□□ -0.54
LINC00173-203ENST00000480237 KIAA1024Q9UPX6 916 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 PASKQ96RG2 1323 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 MED24O75448 989 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 SSBP05455 408 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC00173-203ENST00000480237 RPA1P27694 616 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 GCLCP48506 637 aaPredicted RBP11.67□□□□□ -0.54
LINC00173-203ENST00000480237 ALDH5A1P51649 535 aaPredicted RBP11.67□□□□□ -0.54
LINC00173-203ENST00000480237 CNTN2Q02246 1040 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 CYP4A11Q02928 519 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 KCTD2Q14681 263 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 PADI6Q6TGC4 694 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 VSIG10LQ86VR7 867 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 SHCBP1Q8NEM2 672 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 MPHOSPH6Q99547 160 aaKnown RBP11.67□□□□□ -0.54
LINC00173-203ENST00000480237 RIT2Q99578 217 aa11.67□□□□□ -0.54
LINC00173-203ENST00000480237 EIF2AK1Q9BQI3 630 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms