RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 HINFPQ9BQA5 517 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 KCTD10Q9H3F6 313 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 LRRIQ3A6PVS8 624 aaPredicted RBP18.91■□□□□ 0.62
PKD1-213ENST00000480227 TACC1O75410 805 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 EIF3JO75822 258 aaKnown RBP18.91■□□□□ 0.62
PKD1-213ENST00000480227 SPATA31C1P0DKV0 1188 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 ECE1P42892 770 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 CYP4A11Q02928 519 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 C2orf54Q08AI8 447 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 TDRD12Q587J7 1177 aaKnown RBP18.91■□□□□ 0.62
PKD1-213ENST00000480227 PDXDC1Q6P996 788 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 SLC30A10Q6XR72 485 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 FLAD1Q8NFF5 587 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 TRIM58Q8NG06 486 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 GMCL1Q96IK5 515 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 PSMB7Q99436 277 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 VPS18Q9P253 973 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 ADAM21Q9UKJ8 722 aa18.91■□□□□ 0.62
PKD1-213ENST00000480227 YDJCA8MPS7 323 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 NOL4O94818 638 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 MAGEA1P43355 309 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 RBM26Q5T8P6 1007 aaKnown RBP18.9■□□□□ 0.62
PKD1-213ENST00000480227 HAUS3Q68CZ6 603 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 BCAS3Q9H6U6 928 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 JRKLQ9Y4A0 524 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 UTRNP46939 3433 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 STYK1Q6J9G0 422 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 FOXR2Q6PJQ5 311 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 MOXD1Q6UVY6 613 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 CCDC102AQ96A19 550 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 GDAP1L1Q96MZ0 367 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 SALL4Q9UJQ4 1053 aa18.9■□□□□ 0.62
PKD1-213ENST00000480227 MSH4O15457 936 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 SREBF1P36956 1147 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 RASSF7Q02833 373 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 Q4G0T1 1027 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 KIAA1755Q5JYT7 1200 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 HGSNATQ68CP4 663 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 TRIM59Q8IWR1 403 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 COG1Q8WTW3 980 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 LSM14BQ9BX40 385 aaKnown RBP18.89■□□□□ 0.61
PKD1-213ENST00000480227 SNX12Q9UMY4 172 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.89■□□□□ 0.61
PKD1-213ENST00000480227 ATRNL1Q5VV63 1379 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 FRMD3A2A2Y4 597 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 CCDC66A2RUB6 948 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 TCP10L2B9ZVM9 353 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 PHACTR2O75167 634 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
PKD1-213ENST00000480227 LCA5LO95447 670 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 CXCR5P32302 372 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 TNNT3P45378 269 aaPredicted RBP18.89■□□□□ 0.61
PKD1-213ENST00000480227 POLR2FP61218 127 aaKnown RBP18.89■□□□□ 0.61
PKD1-213ENST00000480227 ADAM9Q13443 819 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 GIT2Q14161 759 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 RPGRIP1Q96KN7 1286 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 CEP63Q96MT8 703 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 REEP2Q9BRK0 252 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 PRR12Q9ULL5 1215 aa18.89■□□□□ 0.61
PKD1-213ENST00000480227 TLR2O60603 784 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 HMGB2P26583 209 aaKnown RBP18.88■□□□□ 0.61
PKD1-213ENST00000480227 HOXA7P31268 230 aaPredicted RBP18.88■□□□□ 0.61
PKD1-213ENST00000480227 FAM83BQ5T0W9 1011 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 GSPT2Q8IYD1 628 aaKnown RBP18.88■□□□□ 0.61
PKD1-213ENST00000480227 CLRN2A0PK11 232 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 RSPH10B2B2RC85 870 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 BUB1O43683 1085 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 RSPH10BP0C881 870 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 RPA1P27694 616 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 NAP1L1P55209 391 aaKnown RBP18.88■□□□□ 0.61
PKD1-213ENST00000480227 ARID5AQ03989 594 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 ENOX2Q16206 610 aaKnown RBP18.88■□□□□ 0.61
PKD1-213ENST00000480227 ASTE1Q2TB18 679 aaPredicted RBP18.88■□□□□ 0.61
PKD1-213ENST00000480227 NFRKBQ6P4R8 1299 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 SFR1Q86XK3 245 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 CREG2Q8IUH2 290 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 ACER1Q8TDN7 264 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 C7orf43Q8WVR3 580 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 TBC1D5Q92609 795 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.88■□□□□ 0.61
PKD1-213ENST00000480227 DNM3Q9UQ16 869 aa18.88■□□□□ 0.61
PKD1-213ENST00000480227 PITPNM2Q9BZ72 1349 aa18.87■□□□□ 0.61
PKD1-213ENST00000480227 PPIP5K2O43314 1243 aa18.87■□□□□ 0.61
PKD1-213ENST00000480227 NCK2O43639 380 aa18.87■□□□□ 0.61
PKD1-213ENST00000480227 NR2F2P24468 414 aa18.87■□□□□ 0.61
PKD1-213ENST00000480227 SFMBT2Q5VUG0 894 aa18.87■□□□□ 0.61
PKD1-213ENST00000480227 ERMNQ8TAM6 284 aa18.87■□□□□ 0.61
PKD1-213ENST00000480227 ALS2CR12Q96Q35 445 aa18.87■□□□□ 0.61
PKD1-213ENST00000480227 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.87■□□□□ 0.61
PKD1-213ENST00000480227 RGL1Q9NZL6 768 aa18.87■□□□□ 0.61
PKD1-213ENST00000480227 CEP72Q9P209 647 aa18.87■□□□□ 0.61
PKD1-213ENST00000480227 FAN1Q9Y2M0 1017 aa18.87■□□□□ 0.61
PKD1-213ENST00000480227 EML1O00423 815 aa18.86■□□□□ 0.61
PKD1-213ENST00000480227 TBX3O15119 743 aa18.86■□□□□ 0.61
PKD1-213ENST00000480227 ENTPD3O75355 529 aa18.86■□□□□ 0.61
PKD1-213ENST00000480227 MATR3P43243 847 aaKnown RBP eCLIP18.86■□□□□ 0.61
PKD1-213ENST00000480227 LMAN1P49257 510 aa18.86■□□□□ 0.61
PKD1-213ENST00000480227 HSP90B2PQ58FF3 399 aa18.86■□□□□ 0.61
PKD1-213ENST00000480227 CC2D2BQ6DHV5 1058 aa18.86■□□□□ 0.61
PKD1-213ENST00000480227 SMARCAL1Q9NZC9 954 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms