RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 UBA7P41226 1012 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 NDUFA8P51970 172 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 CHMP4BP1P59074 171 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 IRX5P78411 483 aaPredicted RBP7.23□□□□□ -1.25
HERC4-210ENST00000480158 CACNB2Q08289 660 aaPredicted RBP7.23□□□□□ -1.25
HERC4-210ENST00000480158 ORC2Q13416 577 aaPredicted RBP7.23□□□□□ -1.25
HERC4-210ENST00000480158 TTLL4Q14679 1199 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 KARSQ15046 597 aaKnown RBP7.23□□□□□ -1.25
HERC4-210ENST00000480158 ARHGEF6Q15052 776 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 MFSD14CQ5VZR4 134 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 NIPA1Q7RTP0 329 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 DHX37Q8IY37 1157 aaKnown RBP7.23□□□□□ -1.25
HERC4-210ENST00000480158 BANK1Q8NDB2 785 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 MORC4Q8TE76 937 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 SCFD2Q8WU76 684 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 CDHR1Q96JP9 859 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 TEKT3Q9BXF9 490 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 KATNBL1Q9H079 304 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 JPH1Q9HDC5 661 aaPredicted RBP7.23□□□□□ -1.25
HERC4-210ENST00000480158 RGL1Q9NZL6 768 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 VAV3Q9UKW4 847 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 MYH15Q9Y2K3 1946 aa7.23□□□□□ -1.25
HERC4-210ENST00000480158 TBX3O15119 743 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 MAFGO15525 162 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 HSPA8P11142 646 aaKnown RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 PRKAR2AP13861 404 aaKnown RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 PFKFB1P16118 471 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 SMPD1P17405 629 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 UBE2HP62256 183 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 TNFAIP2Q03169 654 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 SPIRE1Q08AE8 756 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 CTTNQ14247 550 aaKnown RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 DHX8Q14562 1220 aaKnown RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 HSDL1Q3SXM5 330 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 OLFML2BQ68BL8 750 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 TPH2Q8IWU9 490 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 TMEM87AQ8NBN3 555 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 TRPV1Q8NER1 839 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 GPT2Q8TD30 523 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 SNX29Q8TEQ0 813 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 MRPS27Q92552 414 aaKnown RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 RIT2Q99578 217 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 VTA1Q9NP79 307 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 TBC1D22BQ9NU19 505 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 SLC9A2Q9UBY0 812 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 MCM3APO60318 1980 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 DDX11L8A8MPP1 907 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 NOP56O00567 594 aaKnown RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 POLR2DO15514 142 aaKnown RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 DYNC1LI2O43237 492 aaPredicted RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 MAP3K13O43283 966 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 NR1I2O75469 434 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 ZNF865P0CJ78 1059 aaPredicted RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 CCND3P30281 292 aaPredicted RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 LONP1P36776 959 aaKnown RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 CCT6AP40227 531 aaKnown RBP7.22□□□□□ -1.25
HERC4-210ENST00000480158 FXR2P51116 673 aaKnown RBP eCLIP7.22□□□□□ -1.25
HERC4-210ENST00000480158 CCDC62Q6P9F0 684 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 MIER3Q7Z3K6 550 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 CABP7Q86V35 215 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 IGSF22Q8N9C0 903 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 STAMQ92783 540 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 SPATA33Q96N06 139 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 SH2D3AQ9BRG2 576 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 RAB34Q9BZG1 259 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 DISC1Q9NRI5 854 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 PLXNA1Q9UIW2 1896 aa7.22□□□□□ -1.25
HERC4-210ENST00000480158 MGAMO43451 1857 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 A0A087X0B3 334 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 POTEFA5A3E0 1075 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 BACH1O14867 736 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 ZBTB39O15060 712 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 MED24O75448 989 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 FARP2O94887 1054 aaPredicted RBP7.21□□□□□ -1.25
HERC4-210ENST00000480158 GNRH1P01148 92 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 INHAP05111 366 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 TGFB3P10600 412 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 CMA1P23946 247 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 GRK4P32298 578 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 ICAM3P32942 547 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 ACTR2P61160 394 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 NEDD9Q14511 834 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 PDIA5Q14554 519 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 CAMK4Q16566 473 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 ECM1Q16610 540 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 CELF3Q5SZQ8 465 aaKnown RBP7.21□□□□□ -1.25
HERC4-210ENST00000480158 UTP14CQ5TAP6 766 aaKnown RBP7.21□□□□□ -1.25
HERC4-210ENST00000480158 RESP18Q5W5W9 173 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 KRT79Q5XKE5 535 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 SWSAP1Q6NVH7 229 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 POTEGQ6S5H5 508 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 CCDC73Q6ZRK6 1079 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 MSL3Q8N5Y2 521 aaKnown RBP7.21□□□□□ -1.25
HERC4-210ENST00000480158 PPP1R13LQ8WUF5 828 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 DHX58Q96C10 678 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 DYDC2Q96IM9 177 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 CDK5RAP3Q96JB5 506 aa7.21□□□□□ -1.25
HERC4-210ENST00000480158 EIF2AK1Q9BQI3 630 aaKnown RBP7.21□□□□□ -1.25
HERC4-210ENST00000480158 MMTAG2Q9BU76 263 aaKnown RBP7.21□□□□□ -1.25
HERC4-210ENST00000480158 FAM13BQ9NYF5 915 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms