RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 TRIOO75962 3097 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 DCXO43602 365 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 OATP04181 439 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 COL19A1Q14993 1142 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 CSPP1Q1MSJ5 1256 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 KIAA0753Q2KHM9 967 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 QRICH1Q2TAL8 776 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 TIGD5Q53EQ6 642 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 ASPRV1Q53RT3 343 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 ZNF618Q5T7W0 954 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 TICAM2Q86XR7 235 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 WNT8BQ93098 351 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 EMID1Q96A84 441 aaPredicted RBP12.02□□□□□ -0.49
SMURF1-204ENST00000480055 ZSCAN10Q96SZ4 725 aaPredicted RBP12.02□□□□□ -0.49
SMURF1-204ENST00000480055 LNPKQ9C0E8 428 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 INSL6Q9Y581 213 aa12.02□□□□□ -0.49
SMURF1-204ENST00000480055 B4E1Z4 1266 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 BHMG1C9JSJ3 638 aaPredicted RBP12.01□□□□□ -0.49
SMURF1-204ENST00000480055 HAS3O00219 553 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 HRO43593 1189 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 LGR5O75473 907 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 F2P00734 622 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 NR3C2P08235 984 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 SDSP20132 328 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 THPOP40225 353 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 ZP2Q05996 745 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 PTPROQ16827 1216 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 B4GALNT3Q6L9W6 998 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 CWC27Q6UX04 472 aaKnown RBP12.01□□□□□ -0.49
SMURF1-204ENST00000480055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMURF1-204ENST00000480055 PPTC7Q8NI37 304 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 FBXL18Q96ME1 805 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 SAMD11Q96NU1 681 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 UIMC1Q96RL1 719 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 JMJD4Q9H9V9 463 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 PXMP2Q9NR77 195 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 SEPT9Q9UHD8 586 aaPredicted RBP12.01□□□□□ -0.49
SMURF1-204ENST00000480055 CTNNA3Q9UI47 895 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 EMSYQ7Z589 1322 aa12.01□□□□□ -0.49
SMURF1-204ENST00000480055 H3BQ06 376 aaPredicted RBP12□□□□□ -0.49
SMURF1-204ENST00000480055 RBAK-RBAKDNI3L0D1 243 aa12□□□□□ -0.49
SMURF1-204ENST00000480055 SMAPO00193 183 aa12□□□□□ -0.49
SMURF1-204ENST00000480055 AMHP03971 560 aa12□□□□□ -0.49
SMURF1-204ENST00000480055 HOXD8P13378 290 aaPredicted RBP12□□□□□ -0.49
SMURF1-204ENST00000480055 RRP1P56182 461 aaKnown RBP12□□□□□ -0.49
SMURF1-204ENST00000480055 ZNF200P98182 395 aaPredicted RBP12□□□□□ -0.49
SMURF1-204ENST00000480055 IMMTQ16891 758 aaKnown RBP12□□□□□ -0.49
SMURF1-204ENST00000480055 PABPC5Q96DU9 382 aaKnown RBP12□□□□□ -0.49
SMURF1-204ENST00000480055 SPATA33Q96N06 139 aa12□□□□□ -0.49
SMURF1-204ENST00000480055 UBAC1Q9BSL1 405 aa12□□□□□ -0.49
SMURF1-204ENST00000480055 AMNQ9BXJ7 453 aa12□□□□□ -0.49
SMURF1-204ENST00000480055 DIAPH3Q9NSV4 1193 aa12□□□□□ -0.49
SMURF1-204ENST00000480055 PRKAG3Q9UGI9 489 aa12□□□□□ -0.49
SMURF1-204ENST00000480055 TTC3P53804 2025 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 RSPH10B2B2RC85 870 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 H3BNC9 293 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 PPFIA4O75335 1185 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 RSPH10BP0C881 870 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 NT5C2P49902 561 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 HDAC1Q13547 482 aaPredicted RBP11.99□□□□□ -0.49
SMURF1-204ENST00000480055 EPC2Q52LR7 807 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 KCNV1Q6PIU1 500 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 LAPTM4BQ86VI4 370 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 MYOCDQ8IZQ8 938 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 ENAHQ8N8S7 591 aaPredicted RBP11.99□□□□□ -0.49
SMURF1-204ENST00000480055 BANK1Q8NDB2 785 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 KRT23Q9C075 422 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 MLXIPQ9HAP2 919 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 ZSWIM5Q9P217 1185 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 FAM50BQ9Y247 325 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 ADGRG1Q9Y653 693 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 PLXNA4Q9HCM2 1894 aa11.99□□□□□ -0.49
SMURF1-204ENST00000480055 GGPS1O95749 300 aa11.98□□□□□ -0.49
SMURF1-204ENST00000480055 HOXA13P31271 388 aaPredicted RBP11.98□□□□□ -0.49
SMURF1-204ENST00000480055 PLEKHG4Q58EX7 1191 aa11.98□□□□□ -0.49
SMURF1-204ENST00000480055 TCEAL5Q5H9L2 206 aa11.98□□□□□ -0.49
SMURF1-204ENST00000480055 CELF3Q5SZQ8 465 aaKnown RBP11.98□□□□□ -0.49
SMURF1-204ENST00000480055 IFIT1BQ5T764 474 aaKnown RBP11.98□□□□□ -0.49
SMURF1-204ENST00000480055 MYSM1Q5VVJ2 828 aa11.98□□□□□ -0.49
SMURF1-204ENST00000480055 EP400NLQ6ZTU2 488 aa11.98□□□□□ -0.49
SMURF1-204ENST00000480055 SERINC5Q86VE9 423 aa11.98□□□□□ -0.49
SMURF1-204ENST00000480055 ADHFE1Q8IWW8 467 aa11.98□□□□□ -0.49
SMURF1-204ENST00000480055 DBF4BQ8NFT6 615 aa11.98□□□□□ -0.49
SMURF1-204ENST00000480055 ANKS1AQ92625 1134 aa11.98□□□□□ -0.49
SMURF1-204ENST00000480055 ATP6V0A1Q93050 837 aa11.98□□□□□ -0.49
SMURF1-204ENST00000480055 NSUN3Q9H649 340 aaKnown RBP11.98□□□□□ -0.49
SMURF1-204ENST00000480055 PCDHA1Q9Y5I3 950 aa11.98□□□□□ -0.49
SMURF1-204ENST00000480055 BAZ2BQ9UIF8 2168 aaKnown RBP11.98□□□□□ -0.49
SMURF1-204ENST00000480055 C17orf102A2RUQ5 167 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 KLRF2D3W0D1 207 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 HIP1O00291 1037 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 NOP56O00567 594 aaKnown RBP11.97□□□□□ -0.49
SMURF1-204ENST00000480055 UPP2O95045 317 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 CCND2P30279 289 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 HSD17B4P51659 736 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 GPM6BQ13491 265 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 PGM5Q15124 567 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 HSDL1Q3SXM5 330 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 HFE2Q6ZVN8 426 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 FCHSD1Q86WN1 690 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms