RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 HSD17B14Q9BPX1 270 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 JPH1Q9HDC5 661 aaPredicted RBP14.75□□□□□ -0.05
CHD3-210ENST00000479080 RGL1Q9NZL6 768 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 SLC9A2Q9UBY0 812 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 A0A087WWV3 80 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 POTEB3A0JP26 581 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 GOLGA6L22H0YM25 854 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 CTAGE5O15320 804 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 ACTN4O43707 911 aaKnown RBP14.74□□□□□ -0.05
CHD3-210ENST00000479080 CCND3P30281 292 aaPredicted RBP14.74□□□□□ -0.05
CHD3-210ENST00000479080 ACTR2P61160 394 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 SP4Q02446 784 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 TTLL4Q14679 1199 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 EPHA7Q15375 998 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 HSDL1Q3SXM5 330 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 DUSP28Q4G0W2 176 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 ZNF746Q6NUN9 644 aaPredicted RBP14.74□□□□□ -0.05
CHD3-210ENST00000479080 POTEBQ6S5H4 581 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 METTL7BQ6UX53 244 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 ABHD15Q6UXT9 468 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 PXYLP1Q8TE99 480 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 SNX29Q8TEQ0 813 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 GPR20Q99678 358 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 EIF2AK1Q9BQI3 630 aaKnown RBP14.74□□□□□ -0.05
CHD3-210ENST00000479080 PANK2Q9BZ23 570 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 BLOC1S4Q9NUP1 217 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 NRBP1Q9UHY1 535 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 PTPN22Q9Y2R2 807 aa14.74□□□□□ -0.05
CHD3-210ENST00000479080 IGKV6D-21A0A0A0MT36 114 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 SLITRK3O94933 977 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 STBD1O95210 358 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 SLC34A2O95436 690 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 HMGCRP04035 888 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 INHAP05111 366 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 PRKAR2AP13861 404 aaKnown RBP14.73□□□□□ -0.05
CHD3-210ENST00000479080 LBX1P52954 281 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 PRMT2P55345 433 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 KRT76Q01546 638 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 CYP4A11Q02928 519 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 NEDD9Q14511 834 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 MFSD14CQ5VZR4 134 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 IQSEC1Q6DN90 963 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 KCNV1Q6PIU1 500 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 MIER3Q7Z3K6 550 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 CATSPER3Q86XQ3 398 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 CCDC60Q8IWA6 550 aaPredicted RBP14.73□□□□□ -0.05
CHD3-210ENST00000479080 PDILTQ8N807 584 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 RAET1EQ8TD07 263 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 EMID1Q96A84 441 aaPredicted RBP14.73□□□□□ -0.05
CHD3-210ENST00000479080 PLIN2Q99541 437 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 MTRQ99707 1265 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 SDF4Q9BRK5 362 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 DISC1Q9NRI5 854 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 KCNH3Q9ULD8 1083 aa14.73□□□□□ -0.05
CHD3-210ENST00000479080 IGSF9BQ9UPX0 1349 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 MYADML2A6NDP7 307 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 ZNF862O60290 1169 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 GH1P01241 217 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 SUPT20HL2P0C7V6 817 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 HOXD8P13378 290 aaPredicted RBP14.72□□□□□ -0.05
CHD3-210ENST00000479080 PLCG1P19174 1290 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 ATP4AP20648 1035 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 PSMC6P62333 389 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 TNFAIP2Q03169 654 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 FAM160A1Q05DH4 1040 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 CTTNQ14247 550 aaKnown RBP14.72□□□□□ -0.05
CHD3-210ENST00000479080 PDXDC2PQ6P474 469 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 POTEGQ6S5H5 508 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 DHX37Q8IY37 1157 aaKnown RBP14.72□□□□□ -0.05
CHD3-210ENST00000479080 TRMT44Q8IYL2 757 aaKnown RBP14.72□□□□□ -0.05
CHD3-210ENST00000479080 SLAIN1Q8ND83 568 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 BANK1Q8NDB2 785 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 SH3TC2Q8TF17 1288 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 POLR3CQ9BUI4 534 aaPredicted RBP14.72□□□□□ -0.05
CHD3-210ENST00000479080 DACT1Q9NYF0 836 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 TMEM63CQ9P1W3 806 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 SERTAD1Q9UHV2 236 aa14.72□□□□□ -0.05
CHD3-210ENST00000479080 WDR64B1ANS9 1081 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 ZBTB39O15060 712 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 POLR2DO15514 142 aaKnown RBP14.71□□□□□ -0.05
CHD3-210ENST00000479080 RPA1P27694 616 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 GRK4P32298 578 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 CCT6AP40227 531 aaKnown RBP14.71□□□□□ -0.05
CHD3-210ENST00000479080 UBA7P41226 1012 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 JAK3P52333 1124 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 LONRF3Q496Y0 759 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 KRT79Q5XKE5 535 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 TRIM50Q86XT4 487 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 SMAP1Q8IYB5 467 aaPredicted RBP14.71□□□□□ -0.05
CHD3-210ENST00000479080 GRAMD1CQ8IYS0 662 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 RDM1Q8NG50 284 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 AFG1LQ8WV93 481 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 DHX58Q96C10 678 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 FAM13BQ9NYF5 915 aa14.71□□□□□ -0.05
CHD3-210ENST00000479080 CENPFP49454 3210 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 TMEM150BA6NC51 233 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 GOLGA6L4A6NEF3 574 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 E9PMD0 336 aa14.7□□□□□ -0.06
CHD3-210ENST00000479080 NKRFO15226 690 aaKnown RBP eCLIP14.7□□□□□ -0.06
CHD3-210ENST00000479080 SEPT4O43236 478 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms