RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 MMGT1Q8N4V1 131 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 SH3RF3Q8TEJ3 882 aaPredicted RBP12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 ZIM3Q96PE6 472 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 TMEM47Q9BQJ4 181 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 TLR10Q9BXR5 811 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 TMEM165Q9HC07 324 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 PCDHGC5Q9Y5F6 944 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 SRCAPQ6ZRS2 3230 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 A6NNZ2 444 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 ZSCAN9O15535 394 aaPredicted RBP12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 SMNDC1O75940 238 aaKnown RBP eCLIP12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 OATP04181 439 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 EPHB4P54760 987 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 IFFO1Q0D2I5 559 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 IFT88Q13099 833 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 NONOQ15233 471 aaKnown RBP eCLIP12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 TUBB8Q3ZCM7 444 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 SV2BQ7L1I2 683 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 ARHGAP22Q7Z5H3 698 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 FAM81AQ8TBF8 368 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 TBC1D31Q96DN5 1066 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 MMTAG2Q9BU76 263 aaKnown RBP12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 SIK3Q9Y2K2 1263 aa12.12□□□□□ -0.47
LRRFIP1-211ENST00000478958 DCCP43146 1447 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 OPA1O60313 960 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 TCP1P17987 556 aaKnown RBP12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 AMPD3Q01432 767 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 GUCY1A3Q02108 690 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 NNTQ13423 1086 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 DRP2Q13474 957 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 TSHZ1Q6ZSZ6 1077 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 GOLPH3Q9H4A6 298 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 ACTR5Q9H9F9 607 aaPredicted RBP12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 PAPOLBQ9NRJ5 636 aaKnown RBP12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 HEXIM1O94992 359 aaKnown RBP12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 MYL1P05976 194 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 POLD1P28340 1107 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 CD151P48509 253 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 MYO1EQ12965 1108 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 GRM4Q14833 912 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 SOGA3Q5TF21 947 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 ZNF662Q6ZS27 426 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 CCDC121Q6ZUS5 278 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 NEK8Q86SG6 692 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 DGKHQ86XP1 1220 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 ZSCAN29Q8IWY8 852 aaPredicted RBP12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 GPR101Q96P66 508 aaPredicted RBP12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 NOX5Q96PH1 765 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 KRT12Q99456 494 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 SH3GLB2Q9NR46 395 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 HAUS2Q9NVX0 235 aa12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 CORO1CQ9ULV4 474 aaPredicted RBP12.11□□□□□ -0.47
LRRFIP1-211ENST00000478958 MYH13Q9UKX3 1938 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 HPDP32754 393 aaPredicted RBP12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 EHHADHQ08426 723 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 DBN1Q16643 649 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 LRRC23Q53EV4 343 aaPredicted RBP12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 C12orf60Q5U649 245 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 FBXO33Q7Z6M2 555 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 NELFCDQ8IXH7 590 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 KLHL7Q8IXQ5 586 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 PIGSQ96S52 555 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 SH3GL2Q99962 352 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 C7orf25Q9BPX7 421 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 NUDT12Q9BQG2 462 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 DOCK2Q92608 1830 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 BCORQ6W2J9 1755 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 GOLGA8KD6RF30 607 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 PALMO75781 387 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 GNAQP50148 359 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 POLR2FP61218 127 aaKnown RBP12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 RPS8P62241 208 aaKnown RBP12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 ROR2Q01974 943 aaKnown RBP12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 ZRSR2Q15696 482 aaKnown RBP12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 GRIK5Q16478 980 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 CFAP58Q5T655 872 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 KLHDC7AQ5VTJ3 777 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 TSC22D3Q99576 134 aa12.1□□□□□ -0.47
LRRFIP1-211ENST00000478958 A0A1W2PQJ5 194 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 TRAF5O00463 557 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 TDP2O95551 362 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 FERP16591 822 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 CDC25CP30307 473 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 EIF6P56537 245 aaKnown RBP12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 MAN2A1Q16706 1144 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 GNPTABQ3T906 1256 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 NAA35Q5VZE5 725 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 CENPPQ6IPU0 288 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 MAATS1Q7Z4T9 603 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 COA7Q96BR5 231 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 ZHX3Q9H4I2 956 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 ZNF652Q9Y2D9 606 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 TAF1P21675 1872 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 FRMPD2Q68DX3 1309 aaPredicted RBP12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 KCNQ2O43526 872 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 GNAT1P11488 350 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 SEC24CP53992 1094 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 HLTFQ14527 1009 aaKnown RBP eCLIP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms