RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GPR27Q9NS67 375 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 MSRB2Q9Y3D2 182 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 C1QTNF3-AMACRE9PGA6 284 aa6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 U2SURPO15042 1029 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 AKAP8O43823 692 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 GNAT1P11488 350 aa6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 COL6A2P12110 1019 aa6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 CANXP27824 592 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 PPP2CBP62714 309 aa6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 PPP2CAP67775 309 aa6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 HSP90AA2PQ14568 343 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 SPRED1Q7Z699 444 aa6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 KLHL36Q8N4N3 616 aa6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 PTPN18Q99952 460 aa6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 CDIP1Q9H305 208 aa6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 SRRDQ9UH36 339 aa6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 CDK11AQ9UQ88 783 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-212ENST00000478573 GPR42O15529 346 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 PRODHO43272 600 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 FBXO21O94952 628 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 LTFP02788 710 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 GRK2P25098 689 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 GRK3P35626 688 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 GLRBP48167 497 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 TUSC3Q13454 348 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 BMS1Q14692 1282 aaKnown RBP6□□□□□ -1.45
CDC42BPA-212ENST00000478573 DDR2Q16832 855 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 CYP4F22Q6NT55 531 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 KCNT2Q6UVM3 1135 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 NUDT10Q8NFP7 164 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 CLEC4DQ8WXI8 215 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 NUDT11Q96G61 164 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 AARSD1Q9BTE6 412 aaKnown RBP6□□□□□ -1.45
CDC42BPA-212ENST00000478573 KLC2Q9H0B6 622 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 DLL4Q9NR61 685 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 TBX22Q9Y458 520 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 CADPSQ9ULU8 1353 aa6□□□□□ -1.45
CDC42BPA-212ENST00000478573 CAPNS1P04632 268 aa5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 C6P13671 934 aa5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 RASA3Q14644 834 aa5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 PAN2Q504Q3 1202 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 PKN3Q6P5Z2 889 aa5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 OTOP3Q7RTS5 596 aa5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 RALYLQ86SE5 291 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 PROSER1Q86XN7 944 aa5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 FAM177A1Q8N128 213 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 SLC16A11Q8NCK7 471 aa5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 TTLL11Q8NHH1 800 aa5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 CCDC113Q9H0I3 377 aa5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 ZFP69BQ9UJL9 534 aa5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 TMA7Q9Y2S6 64 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-212ENST00000478573 TLDC2A0PJX2 215 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 BLACEA4D250 179 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 CKMP06732 381 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 EPHB4P54760 987 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 SPIRE1Q08AE8 756 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 SMAD2Q15796 467 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 SKIDA1Q1XH10 827 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 RSPO2Q6UXX9 243 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 GPR155Q7Z3F1 870 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 DTX3Q8N9I9 347 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 DCAF4Q8WV16 495 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 MRFAP1L1Q96HT8 127 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 DEPDC7Q96QD5 511 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 CDK5RAP1Q96SZ6 601 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 SNTG2Q9NY99 539 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 TSC22D4Q9Y3Q8 395 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 NUB1Q9Y5A7 615 aa5.98□□□□□ -1.45
CDC42BPA-212ENST00000478573 IQCA1LA6NCM1 817 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 NKRFO15226 690 aaKnown RBP eCLIP5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 COL6A1P12109 1028 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 FAHP16930 419 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 CDSNQ15517 529 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 KIZQ2M2Z5 673 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 SLFN13Q68D06 897 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 NSMFQ6X4W1 530 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 LBX2Q6XYB7 198 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 STPG3Q8N7X2 389 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 SRPK1Q96SB4 655 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 CD248Q9HCU0 757 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 ARHGAP20Q9P2F6 1191 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 DSEQ9UL01 958 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 TCAF1Q9Y4C2 921 aa5.97□□□□□ -1.45
CDC42BPA-212ENST00000478573 SOD2P04179 222 aa5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 PABPC1P11940 636 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 TACR2P21452 398 aa5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 IFRD2Q12894 506 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 RASGRF1Q13972 1273 aa5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 CD276Q5ZPR3 534 aa5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 Q6ZUG5 572 aa5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 UHMK1Q8TAS1 419 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 SGSM3Q96HU1 749 aa5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 LRRC37BQ96QE4 947 aa5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 SCAND2PQ9GZW5 306 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 ARHGEF4Q9NR80 690 aa5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 HSPBP1Q9NZL4 362 aa5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 ADAM29Q9UKF5 820 aa5.96□□□□□ -1.46
CDC42BPA-212ENST00000478573 TRAV20A0A0B4J274 112 aa5.95□□□□□ -1.46
CDC42BPA-212ENST00000478573 FAM221BA6H8Z2 402 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms