RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
PDCD11-204ENST00000478543 IL17AQ16552 155 aa13.19□□□□□ -0.3
PDCD11-204ENST00000478543 GNPTABQ3T906 1256 aa13.19□□□□□ -0.3
PDCD11-204ENST00000478543 TRIM60Q495X7 471 aa13.19□□□□□ -0.3
PDCD11-204ENST00000478543 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
PDCD11-204ENST00000478543 SLC39A5Q6ZMH5 540 aa13.19□□□□□ -0.3
PDCD11-204ENST00000478543 DTHD1Q6ZMT9 781 aa13.19□□□□□ -0.3
PDCD11-204ENST00000478543 ZNF467Q7Z7K2 595 aaPredicted RBP13.19□□□□□ -0.3
PDCD11-204ENST00000478543 INPP4AQ96PE3 977 aaPredicted RBP13.19□□□□□ -0.3
PDCD11-204ENST00000478543 ZNF577Q9BSK1 485 aa13.19□□□□□ -0.3
PDCD11-204ENST00000478543 KCNH7Q9NS40 1196 aa13.19□□□□□ -0.3
PDCD11-204ENST00000478543 DIS3Q9Y2L1 958 aaKnown RBP13.19□□□□□ -0.3
PDCD11-204ENST00000478543 SRPRBQ9Y5M8 271 aaKnown RBP13.19□□□□□ -0.3
PDCD11-204ENST00000478543 TMEM265A0A087WTH1 108 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 LOC102724159A0A0B4J2E5 919 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 DDX39AO00148 427 aaKnown RBP13.18□□□□□ -0.3
PDCD11-204ENST00000478543 SORBS3O60504 671 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 HOXC6P09630 235 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 CYP2C19P33261 490 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 PRPHP41219 470 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 TECP42680 631 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 SEMA3FQ13275 785 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 PWP2Q15269 919 aaKnown RBP13.18□□□□□ -0.3
PDCD11-204ENST00000478543 TMEM266Q2M3C6 531 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 AXDND1Q5T1B0 1012 aaPredicted RBP13.18□□□□□ -0.3
PDCD11-204ENST00000478543 ARL6IP4Q66PJ3 421 aaKnown RBP13.18□□□□□ -0.3
PDCD11-204ENST00000478543 TRMT44Q8IYL2 757 aaKnown RBP13.18□□□□□ -0.3
PDCD11-204ENST00000478543 SLFN12Q8IYM2 578 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 MORC4Q8TE76 937 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 FERMT2Q96AC1 680 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 GPRASP2Q96D09 838 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 TINF2Q9BSI4 451 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
PDCD11-204ENST00000478543 AGO4Q9HCK5 861 aaKnown RBP13.18□□□□□ -0.3
PDCD11-204ENST00000478543 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
PDCD11-204ENST00000478543 MORC2Q9Y6X9 1032 aaPredicted RBP13.18□□□□□ -0.3
PDCD11-204ENST00000478543 IPO5O00410 1097 aaKnown RBP13.17□□□□□ -0.3
PDCD11-204ENST00000478543 TBX3O15119 743 aa13.17□□□□□ -0.3
PDCD11-204ENST00000478543 SNAI1O95863 264 aaPredicted RBP13.17□□□□□ -0.3
PDCD11-204ENST00000478543 CYBAP13498 195 aa13.17□□□□□ -0.3
PDCD11-204ENST00000478543 LRCH2Q5VUJ6 765 aa13.17□□□□□ -0.3
PDCD11-204ENST00000478543 MAMDC4Q6UXC1 1216 aa13.17□□□□□ -0.3
PDCD11-204ENST00000478543 FSIP1Q8NA03 581 aa13.17□□□□□ -0.3
PDCD11-204ENST00000478543 SLC5A5Q92911 643 aa13.17□□□□□ -0.3
PDCD11-204ENST00000478543 FAM20AQ96MK3 541 aa13.17□□□□□ -0.3
PDCD11-204ENST00000478543 TTC12Q9H892 705 aaPredicted RBP13.17□□□□□ -0.3
PDCD11-204ENST00000478543 PRKAG2Q9UGJ0 569 aa13.17□□□□□ -0.3
PDCD11-204ENST00000478543 MCM3APO60318 1980 aa13.17□□□□□ -0.3
PDCD11-204ENST00000478543 SYNGAP1Q96PV0 1343 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 POTEMA6NI47 508 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 PP2D1A8MPX8 630 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 SPATA31C2B4DYI2 1134 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 CHMP2AO43633 222 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 GAS7O60861 476 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 ATP9AO75110 1047 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 CNGA1P29973 690 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 ICAM3P32942 547 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 LONP1P36776 959 aaKnown RBP13.16□□□□□ -0.3
PDCD11-204ENST00000478543 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDCD11-204ENST00000478543 UBE2HP62256 183 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 ITGB3BPQ13352 177 aaPredicted RBP13.16□□□□□ -0.3
PDCD11-204ENST00000478543 PRAMEF19Q5SWL8 479 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 ADALQ6DHV7 355 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 NCAPH2Q6IBW4 605 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 SHC4Q6S5L8 630 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 FAM122AQ96E09 287 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 CDHR1Q96JP9 859 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 TEKT3Q9BXF9 490 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 GOLPH3LQ9H4A5 285 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 VTA1Q9NP79 307 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 PDGFCQ9NRA1 345 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 ZHX1Q9UKY1 873 aaPredicted RBP13.16□□□□□ -0.3
PDCD11-204ENST00000478543 PCDHA12Q9UN75 941 aa13.16□□□□□ -0.3
PDCD11-204ENST00000478543 A0A1B0GVL5 298 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 PSMD10O75832 226 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 ARIH2O95376 493 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 KCNA2P16389 499 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 DNAJB2P25686 324 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 CDC25AP30304 524 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 SP4Q02446 784 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 LY6KQ17RY6 165 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 RESP18Q5W5W9 173 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 OLFML2BQ68BL8 750 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 USP49Q70CQ1 688 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
PDCD11-204ENST00000478543 PPM1EQ8WY54 764 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 MRPS27Q92552 414 aaKnown RBP13.15□□□□□ -0.3
PDCD11-204ENST00000478543 EPSTI1Q96J88 318 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 NECAB3Q96P71 396 aaPredicted RBP13.15□□□□□ -0.3
PDCD11-204ENST00000478543 SDF4Q9BRK5 362 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 KATNBL1Q9H079 304 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 UNC45AQ9H3U1 944 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 BCAS3Q9H6U6 928 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 LRWD1Q9UFC0 647 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 VAV3Q9UKW4 847 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 KIAA1217Q5T5P2 1943 aa13.15□□□□□ -0.3
PDCD11-204ENST00000478543 A0A1W2PQ27 194 aa13.14□□□□□ -0.31
PDCD11-204ENST00000478543 A0A1W2PQ64 194 aa13.14□□□□□ -0.31
PDCD11-204ENST00000478543 A0A1W2PQD8 194 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms