RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 GSTTP1A0A1W2PQM5 241 aa19.22■□□□□ 0.67
TRIM13-208ENST00000478111 GNAT1P11488 350 aa19.22■□□□□ 0.67
TRIM13-208ENST00000478111 ITGB5P18084 799 aa19.22■□□□□ 0.67
TRIM13-208ENST00000478111 SP4Q02446 784 aa19.22■□□□□ 0.67
TRIM13-208ENST00000478111 NLRX1Q86UT6 975 aa19.22■□□□□ 0.67
TRIM13-208ENST00000478111 RAB11FIP4Q86YS3 637 aa19.22■□□□□ 0.67
TRIM13-208ENST00000478111 SEPT8Q92599 483 aa19.22■□□□□ 0.67
TRIM13-208ENST00000478111 GPRASP2Q96D09 838 aa19.22■□□□□ 0.67
TRIM13-208ENST00000478111 ESYT1Q9BSJ8 1104 aa19.22■□□□□ 0.67
TRIM13-208ENST00000478111 PSTPIP2Q9H939 334 aa19.22■□□□□ 0.67
TRIM13-208ENST00000478111 ZNF215Q9UL58 517 aaPredicted RBP19.22■□□□□ 0.67
TRIM13-208ENST00000478111 COL4A6Q14031 1691 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.21■□□□□ 0.67
TRIM13-208ENST00000478111 hCG_1642624A0A1W2PR95 340 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 CCDC69A6NI79 296 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 CHRNA1P02708 482 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 TCF7P36402 384 aaPredicted RBP19.21■□□□□ 0.67
TRIM13-208ENST00000478111 ARHGAP4P98171 946 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 RALGAPA2Q2PPJ7 1873 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 CREB3L3Q68CJ9 461 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 NFXL1Q6ZNB6 911 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 GIMAP8Q8ND71 665 aaPredicted RBP19.21■□□□□ 0.67
TRIM13-208ENST00000478111 LRRC2Q9BYS8 371 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 UBIAD1Q9Y5Z9 338 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 ATG2AQ2TAZ0 1938 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 LOXHD1Q8IVV2 1947 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 NRCAMQ92823 1304 aa19.21■□□□□ 0.67
TRIM13-208ENST00000478111 C5orf42Q9H799 3197 aa19.2■□□□□ 0.66
TRIM13-208ENST00000478111 CALM1P0DP23 149 aa19.2■□□□□ 0.66
TRIM13-208ENST00000478111 CALM2P0DP24 149 aa19.2■□□□□ 0.66
TRIM13-208ENST00000478111 CALM3P0DP25 149 aa19.2■□□□□ 0.66
TRIM13-208ENST00000478111 UBE2SQ16763 222 aa19.2■□□□□ 0.66
TRIM13-208ENST00000478111 RUFY4Q6ZNE9 571 aa19.2■□□□□ 0.66
TRIM13-208ENST00000478111 TMTC3Q6ZXV5 915 aa19.2■□□□□ 0.66
TRIM13-208ENST00000478111 RPAINQ86UA6 219 aa19.2■□□□□ 0.66
TRIM13-208ENST00000478111 FANCBQ8NB91 859 aa19.2■□□□□ 0.66
TRIM13-208ENST00000478111 FBXO22Q8NEZ5 403 aa19.2■□□□□ 0.66
TRIM13-208ENST00000478111 TTC3P53804 2025 aa19.2■□□□□ 0.66
TRIM13-208ENST00000478111 UPP2O95045 317 aa19.19■□□□□ 0.66
TRIM13-208ENST00000478111 EPC2Q52LR7 807 aa19.19■□□□□ 0.66
TRIM13-208ENST00000478111 SGMS1Q86VZ5 419 aa19.19■□□□□ 0.66
TRIM13-208ENST00000478111 CCDC82Q8N4S0 544 aa19.19■□□□□ 0.66
TRIM13-208ENST00000478111 SEPT1Q8WYJ6 367 aa19.19■□□□□ 0.66
TRIM13-208ENST00000478111 APBB2Q92870 758 aa19.19■□□□□ 0.66
TRIM13-208ENST00000478111 EHMT1Q9H9B1 1298 aa19.19■□□□□ 0.66
TRIM13-208ENST00000478111 MGAT3Q09327 533 aa19.18■□□□□ 0.66
TRIM13-208ENST00000478111 MARCH8Q5T0T0 291 aa19.18■□□□□ 0.66
TRIM13-208ENST00000478111 KHSRPQ92945 711 aaKnown RBP eCLIP19.18■□□□□ 0.66
TRIM13-208ENST00000478111 CDHR1Q96JP9 859 aa19.18■□□□□ 0.66
TRIM13-208ENST00000478111 SAMD11Q96NU1 681 aa19.18■□□□□ 0.66
TRIM13-208ENST00000478111 IFIH1Q9BYX4 1025 aaKnown RBP19.18■□□□□ 0.66
TRIM13-208ENST00000478111 EPHX3Q9H6B9 360 aa19.18■□□□□ 0.66
TRIM13-208ENST00000478111 UBE2ZQ9H832 354 aaPredicted RBP19.18■□□□□ 0.66
TRIM13-208ENST00000478111 PCDHA6Q9UN73 950 aa19.18■□□□□ 0.66
TRIM13-208ENST00000478111 PCDHA8Q9Y5H6 950 aa19.18■□□□□ 0.66
TRIM13-208ENST00000478111 SLC12A7Q9Y666 1083 aa19.18■□□□□ 0.66
TRIM13-208ENST00000478111 MBLAC1A4D2B0 266 aaPredicted RBP19.17■□□□□ 0.66
TRIM13-208ENST00000478111 H3BNC9 293 aa19.17■□□□□ 0.66
TRIM13-208ENST00000478111 MTMR1Q13613 665 aa19.17■□□□□ 0.66
TRIM13-208ENST00000478111 TAF2Q6P1X5 1199 aa19.17■□□□□ 0.66
TRIM13-208ENST00000478111 MRPL38Q96DV4 380 aaKnown RBP19.17■□□□□ 0.66
TRIM13-208ENST00000478111 YME1L1Q96TA2 773 aa19.17■□□□□ 0.66
TRIM13-208ENST00000478111 PCYT2Q99447 389 aa19.17■□□□□ 0.66
TRIM13-208ENST00000478111 CD320Q9NPF0 282 aa19.17■□□□□ 0.66
TRIM13-208ENST00000478111 JADE2Q9NQC1 790 aa19.17■□□□□ 0.66
TRIM13-208ENST00000478111 TRIOO75962 3097 aa19.17■□□□□ 0.66
TRIM13-208ENST00000478111 MAFGO15525 162 aa19.16■□□□□ 0.66
TRIM13-208ENST00000478111 PPFIA1Q13136 1202 aa19.16■□□□□ 0.66
TRIM13-208ENST00000478111 LPIN1Q14693 890 aa19.16■□□□□ 0.66
TRIM13-208ENST00000478111 GRIK4Q16099 956 aa19.16■□□□□ 0.66
TRIM13-208ENST00000478111 TYW1BQ6NUM6 668 aa19.16■□□□□ 0.66
TRIM13-208ENST00000478111 TMEM192Q8IY95 271 aa19.16■□□□□ 0.66
TRIM13-208ENST00000478111 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.16■□□□□ 0.66
TRIM13-208ENST00000478111 C1QTNF1Q9BXJ1 281 aa19.16■□□□□ 0.66
TRIM13-208ENST00000478111 ERAP1Q9NZ08 941 aa19.16■□□□□ 0.66
TRIM13-208ENST00000478111 PKD2L1Q9P0L9 805 aa19.16■□□□□ 0.66
TRIM13-208ENST00000478111 SPDYE3A6NKU9 549 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 LINC00271P0C7V0 271 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 GHRP10912 638 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 MARK3P27448 753 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 FUT2Q10981 343 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 LEXMQ3ZCV2 418 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 WWC2Q6AWC2 1192 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 HEATR3Q7Z4Q2 680 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 MICU3Q86XE3 530 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 CYP2W1Q8TAV3 490 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 DNAJB3Q8WWF6 145 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 SMARCAD1Q9H4L7 1026 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 RC3H2Q9HBD1 1191 aaKnown RBP19.15■□□□□ 0.66
TRIM13-208ENST00000478111 ANO2Q9NQ90 1003 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 TUBE1Q9UJT0 475 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 CNTNAP5Q8WYK1 1306 aa19.15■□□□□ 0.66
TRIM13-208ENST00000478111 ENPP3O14638 875 aa19.14■□□□□ 0.65
TRIM13-208ENST00000478111 EXOSC10Q01780 885 aaKnown RBP19.14■□□□□ 0.65
TRIM13-208ENST00000478111 GPM6BQ13491 265 aa19.14■□□□□ 0.65
TRIM13-208ENST00000478111 FBXO47Q5MNV8 452 aa19.14■□□□□ 0.65
TRIM13-208ENST00000478111 APOA5Q6Q788 366 aa19.14■□□□□ 0.65
TRIM13-208ENST00000478111 SKAP1Q86WV1 359 aa19.14■□□□□ 0.65
TRIM13-208ENST00000478111 GLG1Q92896 1179 aa19.14■□□□□ 0.65
TRIM13-208ENST00000478111 ZBTB10Q96DT7 871 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms