RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 TRAF7Q6Q0C0 670 aa20.12■□□□□ 0.81
PTPN7-209ENST00000477554 IL23AQ9NPF7 189 aa20.12■□□□□ 0.81
PTPN7-209ENST00000477554 RBM19Q9Y4C8 960 aaKnown RBP20.12■□□□□ 0.81
PTPN7-209ENST00000477554 TREHO43280 583 aa20.11■□□□□ 0.81
PTPN7-209ENST00000477554 DEXIO95424 95 aa20.11■□□□□ 0.81
PTPN7-209ENST00000477554 PPIGQ13427 754 aaKnown RBP eCLIP20.11■□□□□ 0.81
PTPN7-209ENST00000477554 OTOP2Q7RTS6 562 aa20.11■□□□□ 0.81
PTPN7-209ENST00000477554 TRIM22Q8IYM9 498 aa20.11■□□□□ 0.81
PTPN7-209ENST00000477554 OXER1Q8TDS5 423 aa20.11■□□□□ 0.81
PTPN7-209ENST00000477554 LENG9Q96B70 501 aa20.11■□□□□ 0.81
PTPN7-209ENST00000477554 SEZ6LQ9BYH1 1024 aa20.11■□□□□ 0.81
PTPN7-209ENST00000477554 EHMT1Q9H9B1 1298 aa20.11■□□□□ 0.81
PTPN7-209ENST00000477554 SETD4Q9NVD3 440 aa20.11■□□□□ 0.81
PTPN7-209ENST00000477554 GBF1Q92538 1859 aa20.11■□□□□ 0.81
PTPN7-209ENST00000477554 DHX15O43143 795 aaKnown RBP20.1■□□□□ 0.81
PTPN7-209ENST00000477554 CYP3A4P08684 503 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 IQCF3P0C7M6 154 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 SUPT20HL2P0C7V6 817 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 HOXC8P31273 242 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 FOSBP53539 338 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 RASIP1Q5U651 963 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 PLA2G4DQ86XP0 818 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 GTF3C6Q969F1 213 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 FAM161BQ96MY7 647 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 KATNAL1Q9BW62 490 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 NOD1Q9Y239 953 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 ZNF76P36508 570 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 PBX2P40425 430 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 MBTPS1Q14703 1052 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 EARS2Q5JPH6 523 aaKnown RBP20.1■□□□□ 0.81
PTPN7-209ENST00000477554 NSUN7Q8NE18 718 aaKnown RBP20.1■□□□□ 0.81
PTPN7-209ENST00000477554 CCDC148Q8NFR7 591 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 CCDC12Q8WUD4 166 aaPredicted RBP20.1■□□□□ 0.81
PTPN7-209ENST00000477554 JPH1Q9HDC5 661 aaPredicted RBP20.1■□□□□ 0.81
PTPN7-209ENST00000477554 SH3GLB2Q9NR46 395 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 PCDHA4Q9UN74 947 aa20.1■□□□□ 0.81
PTPN7-209ENST00000477554 PTPRSQ13332 1948 aa20.09■□□□□ 0.81
PTPN7-209ENST00000477554 FAM205CA6NFA0 338 aa20.09■□□□□ 0.81
PTPN7-209ENST00000477554 CKBP12277 381 aa20.09■□□□□ 0.81
PTPN7-209ENST00000477554 GNA11P29992 359 aa20.09■□□□□ 0.81
PTPN7-209ENST00000477554 ANP32AP39687 249 aaKnown RBP20.09■□□□□ 0.81
PTPN7-209ENST00000477554 ACTR2P61160 394 aa20.09■□□□□ 0.81
PTPN7-209ENST00000477554 SEPT1Q8WYJ6 367 aa20.09■□□□□ 0.81
PTPN7-209ENST00000477554 CDHR1Q96JP9 859 aa20.09■□□□□ 0.81
PTPN7-209ENST00000477554 GLT8D2Q9H1C3 349 aa20.09■□□□□ 0.81
PTPN7-209ENST00000477554 SLC9A2Q9UBY0 812 aa20.09■□□□□ 0.81
PTPN7-209ENST00000477554 CHD7Q9P2D1 2997 aa20.09■□□□□ 0.81
PTPN7-209ENST00000477554 NBNO60934 754 aa20.08■□□□□ 0.8
PTPN7-209ENST00000477554 ADAM17P78536 824 aa20.08■□□□□ 0.8
PTPN7-209ENST00000477554 ANKRD1Q15327 319 aa20.08■□□□□ 0.8
PTPN7-209ENST00000477554 PRR16Q569H4 304 aa20.08■□□□□ 0.8
PTPN7-209ENST00000477554 ZNF618Q5T7W0 954 aa20.08■□□□□ 0.8
PTPN7-209ENST00000477554 RUFY4Q6ZNE9 571 aa20.08■□□□□ 0.8
PTPN7-209ENST00000477554 BLIDQ8IZY5 108 aa20.08■□□□□ 0.8
PTPN7-209ENST00000477554 TBCKQ8TEA7 893 aa20.08■□□□□ 0.8
PTPN7-209ENST00000477554 LMBR1Q8WVP7 490 aa20.08■□□□□ 0.8
PTPN7-209ENST00000477554 PHF20Q9BVI0 1012 aa20.08■□□□□ 0.8
PTPN7-209ENST00000477554 ORC3Q9UBD5 711 aaPredicted RBP20.08■□□□□ 0.8
PTPN7-209ENST00000477554 SIP14410 1827 aa20.07■□□□□ 0.8
PTPN7-209ENST00000477554 NFASCO94856 1347 aa20.07■□□□□ 0.8
PTPN7-209ENST00000477554 STK36Q9NRP7 1315 aa20.07■□□□□ 0.8
PTPN7-209ENST00000477554 C17orf102A2RUQ5 167 aa20.07■□□□□ 0.8
PTPN7-209ENST00000477554 PITPNM1O00562 1244 aa20.07■□□□□ 0.8
PTPN7-209ENST00000477554 TDP2O95551 362 aa20.07■□□□□ 0.8
PTPN7-209ENST00000477554 MCM2P49736 904 aa20.07■□□□□ 0.8
PTPN7-209ENST00000477554 DEFB123Q8N688 67 aa20.07■□□□□ 0.8
PTPN7-209ENST00000477554 TRAPPC12Q8WVT3 735 aa20.07■□□□□ 0.8
PTPN7-209ENST00000477554 HERVK_113Q902F9 699 aa20.07■□□□□ 0.8
PTPN7-209ENST00000477554 ATP6V0A1Q93050 837 aa20.07■□□□□ 0.8
PTPN7-209ENST00000477554 TTYH1Q9H313 450 aaPredicted RBP20.07■□□□□ 0.8
PTPN7-209ENST00000477554 MAFGO15525 162 aa20.06■□□□□ 0.8
PTPN7-209ENST00000477554 LGR5O75473 907 aa20.06■□□□□ 0.8
PTPN7-209ENST00000477554 FGBP02675 491 aa20.06■□□□□ 0.8
PTPN7-209ENST00000477554 CIITAP33076 1130 aa20.06■□□□□ 0.8
PTPN7-209ENST00000477554 PTK7Q13308 1070 aa20.06■□□□□ 0.8
PTPN7-209ENST00000477554 NIPA1Q7RTP0 329 aa20.06■□□□□ 0.8
PTPN7-209ENST00000477554 SERINC5Q86VE9 423 aa20.06■□□□□ 0.8
PTPN7-209ENST00000477554 TEX2Q8IWB9 1127 aa20.06■□□□□ 0.8
PTPN7-209ENST00000477554 DAGLBQ8NCG7 672 aa20.06■□□□□ 0.8
PTPN7-209ENST00000477554 GIMAP8Q8ND71 665 aaPredicted RBP20.06■□□□□ 0.8
PTPN7-209ENST00000477554 IPO5O00410 1097 aaKnown RBP20.05■□□□□ 0.8
PTPN7-209ENST00000477554 MSH4O15457 936 aa20.05■□□□□ 0.8
PTPN7-209ENST00000477554 CD2BP2O95400 341 aaKnown RBP20.05■□□□□ 0.8
PTPN7-209ENST00000477554 RABGGTBP53611 331 aa20.05■□□□□ 0.8
PTPN7-209ENST00000477554 MARCH8Q5T0T0 291 aa20.05■□□□□ 0.8
PTPN7-209ENST00000477554 PSRC1Q6PGN9 363 aaPredicted RBP20.05■□□□□ 0.8
PTPN7-209ENST00000477554 CPLX2Q6PUV4 134 aaKnown RBP20.05■□□□□ 0.8
PTPN7-209ENST00000477554 LRRC8DQ7L1W4 858 aa20.05■□□□□ 0.8
PTPN7-209ENST00000477554 TMCO2Q7Z6W1 182 aaPredicted RBP20.05■□□□□ 0.8
PTPN7-209ENST00000477554 CCDC60Q8IWA6 550 aaPredicted RBP20.05■□□□□ 0.8
PTPN7-209ENST00000477554 BICD2Q8TD16 824 aa20.05■□□□□ 0.8
PTPN7-209ENST00000477554 GLG1Q92896 1179 aa20.05■□□□□ 0.8
PTPN7-209ENST00000477554 SNX21Q969T3 373 aa20.05■□□□□ 0.8
PTPN7-209ENST00000477554 SDF4Q9BRK5 362 aa20.05■□□□□ 0.8
PTPN7-209ENST00000477554 WDR81Q562E7 1941 aa20.05■□□□□ 0.8
PTPN7-209ENST00000477554 ATG7O95352 703 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 CTSHP09668 335 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 MYOGP15173 224 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 SELPP16109 830 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 ATP4AP20648 1035 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms