RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 BCAS3Q9H6U6 928 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 SPC25Q9HBM1 224 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 POLR3EQ9NVU0 708 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 SLC9A2Q9UBY0 812 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 Q9Y3F1 56 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 SCN10AQ9Y5Y9 1956 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 ELP1O95163 1332 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 UNC80Q8N2C7 3258 aa17.29■□□□□ 0.36
SEC13-215ENST00000477547 MYADML2A6NDP7 307 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 DHX15O43143 795 aaKnown RBP17.28■□□□□ 0.36
SEC13-215ENST00000477547 ADAMTS4O75173 837 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 PSMD10O75832 226 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
SEC13-215ENST00000477547 TXKP42681 527 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 NASPP49321 788 aaPredicted RBP17.28■□□□□ 0.36
SEC13-215ENST00000477547 GJA9P57773 515 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 KRT76Q01546 638 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 STK38Q15208 465 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 LHX8Q68G74 356 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 PPTC7Q8NI37 304 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 AFG1LQ8WV93 481 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 CHAMP1Q96JM3 812 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 GDF15Q99988 308 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 VAV3Q9UKW4 847 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 ZMYND8Q9ULU4 1186 aaPredicted RBP17.28■□□□□ 0.36
SEC13-215ENST00000477547 KAT6AQ92794 2004 aa17.28■□□□□ 0.36
SEC13-215ENST00000477547 CCNE2O96020 404 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 MMP3P08254 477 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 PRPHP41219 470 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 CPT1AP50416 773 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 KRT85P78386 507 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
SEC13-215ENST00000477547 BEX3Q00994 111 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 PTPAQ15257 358 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 FSCN1Q16658 493 aaKnown RBP17.27■□□□□ 0.36
SEC13-215ENST00000477547 TMEM266Q2M3C6 531 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 HSDL1Q3SXM5 330 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 ATL3Q6DD88 541 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 ZNF746Q6NUN9 644 aaPredicted RBP17.27■□□□□ 0.36
SEC13-215ENST00000477547 C4orf32Q8N8J7 132 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 DIS3LQ8TF46 1054 aaKnown RBP17.27■□□□□ 0.36
SEC13-215ENST00000477547 UNC45AQ9H3U1 944 aa17.27■□□□□ 0.36
SEC13-215ENST00000477547 TTC12Q9H892 705 aaPredicted RBP17.27■□□□□ 0.36
SEC13-215ENST00000477547 TFIP11Q9UBB9 837 aaKnown RBP17.27■□□□□ 0.36
SEC13-215ENST00000477547 POTEMA6NI47 508 aa17.26■□□□□ 0.35
SEC13-215ENST00000477547 YEATS4O95619 227 aa17.26■□□□□ 0.35
SEC13-215ENST00000477547 CST5P28325 142 aaPredicted RBP17.26■□□□□ 0.35
SEC13-215ENST00000477547 ACTR2P61160 394 aa17.26■□□□□ 0.35
SEC13-215ENST00000477547 PPP2R5CQ13362 524 aa17.26■□□□□ 0.35
SEC13-215ENST00000477547 BRDTQ58F21 947 aaPredicted RBP17.26■□□□□ 0.35
SEC13-215ENST00000477547 NCAPH2Q6IBW4 605 aa17.26■□□□□ 0.35
SEC13-215ENST00000477547 RNF180Q86T96 592 aa17.26■□□□□ 0.35
SEC13-215ENST00000477547 C7orf61Q8IZ16 206 aa17.26■□□□□ 0.35
SEC13-215ENST00000477547 GPR20Q99678 358 aa17.26■□□□□ 0.35
SEC13-215ENST00000477547 COL25A1Q9BXS0 654 aaPredicted RBP17.26■□□□□ 0.35
SEC13-215ENST00000477547 CFAP45Q9UL16 551 aa17.26■□□□□ 0.35
SEC13-215ENST00000477547 STXBP5LQ9Y2K9 1186 aa17.26■□□□□ 0.35
SEC13-215ENST00000477547 TELO2Q9Y4R8 837 aa17.26■□□□□ 0.35
SEC13-215ENST00000477547 WDR64B1ANS9 1081 aa17.25■□□□□ 0.35
SEC13-215ENST00000477547 CTAGE5O15320 804 aa17.25■□□□□ 0.35
SEC13-215ENST00000477547 JAK3P52333 1124 aa17.25■□□□□ 0.35
SEC13-215ENST00000477547 SPIRE1Q08AE8 756 aa17.25■□□□□ 0.35
SEC13-215ENST00000477547 LRRC41Q15345 812 aa17.25■□□□□ 0.35
SEC13-215ENST00000477547 ARL6IP4Q66PJ3 421 aaKnown RBP17.25■□□□□ 0.35
SEC13-215ENST00000477547 MIER3Q7Z3K6 550 aa17.25■□□□□ 0.35
SEC13-215ENST00000477547 SMAP1Q8IYB5 467 aaPredicted RBP17.25■□□□□ 0.35
SEC13-215ENST00000477547 PCDHA12Q9UN75 941 aa17.25■□□□□ 0.35
SEC13-215ENST00000477547 SAMM50Q9Y512 469 aa17.25■□□□□ 0.35
SEC13-215ENST00000477547 VWA3AA6NCI4 1184 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 A6NJR5 290 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 KBTBD13C9JR72 458 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 ZNF286BP0CG31 522 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 MARCKSP29966 332 aaPredicted RBP17.24■□□□□ 0.35
SEC13-215ENST00000477547 SFNP31947 248 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 BMP8BP34820 402 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 TCF7P36402 384 aaPredicted RBP17.24■□□□□ 0.35
SEC13-215ENST00000477547 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
SEC13-215ENST00000477547 NKX3-2P78367 333 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 SLC39A14Q15043 492 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 GNASQ5JWF2 1037 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 B3GNT9Q6UX72 402 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 DTHD1Q6ZMT9 781 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 LINC00301Q8NCQ3 95 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 RAB34Q9BZG1 259 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 CRISPLD2Q9H0B8 497 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 MTMR10Q9NXD2 777 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 OGDHLQ9ULD0 1010 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 EMSYQ7Z589 1322 aa17.24■□□□□ 0.35
SEC13-215ENST00000477547 SPTLC2O15270 562 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 ZEB2O60315 1214 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 MYL3P08590 195 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 SUPT20HL2P0C7V6 817 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 HOXD8P13378 290 aaPredicted RBP17.23■□□□□ 0.35
SEC13-215ENST00000477547 SYN1P17600 705 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 TECP42680 631 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 DGKDQ16760 1214 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 GPR153Q6NV75 609 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 MIS18BP1Q6P0N0 1132 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 TRIM50Q86XT4 487 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 ARRDC4Q8NCT1 418 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms