RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 IGLV3-22A0A075B6J6 115 aa24.12■■□□□ 1.45
LIME1-204ENST00000476183 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.12■■□□□ 1.45
LIME1-204ENST00000476183 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.12■■□□□ 1.45
LIME1-204ENST00000476183 C17orf102A2RUQ5 167 aa24.12■■□□□ 1.45
LIME1-204ENST00000476183 GRXCR1A8MXD5 290 aa24.12■■□□□ 1.45
LIME1-204ENST00000476183 CKBP12277 381 aa24.12■■□□□ 1.45
LIME1-204ENST00000476183 ZNF76P36508 570 aa24.12■■□□□ 1.45
LIME1-204ENST00000476183 GPNMBQ14956 572 aa24.12■■□□□ 1.45
LIME1-204ENST00000476183 CPLX2Q6PUV4 134 aaKnown RBP24.12■■□□□ 1.45
LIME1-204ENST00000476183 NIPA1Q7RTP0 329 aa24.12■■□□□ 1.45
LIME1-204ENST00000476183 CCDC155Q8N6L0 562 aa24.12■■□□□ 1.45
LIME1-204ENST00000476183 BICD2Q8TD16 824 aa24.12■■□□□ 1.45
LIME1-204ENST00000476183 AFAP1L1Q8TED9 768 aa24.12■■□□□ 1.45
LIME1-204ENST00000476183 SLC9A2Q9UBY0 812 aa24.12■■□□□ 1.45
LIME1-204ENST00000476183 ZNF215Q9UL58 517 aaPredicted RBP24.12■■□□□ 1.45
LIME1-204ENST00000476183 NFASCO94856 1347 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 EDIL3O43854 480 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 SELPP16109 830 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 RFC2P35250 354 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 NLRP5P59047 1200 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 MCTP2Q6DN12 878 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 TRAF7Q6Q0C0 670 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 SERINC5Q86VE9 423 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 PLA2G4DQ86XP0 818 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 ATP6V0A1Q93050 837 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 PCYT2Q99447 389 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 SETD4Q9NVD3 440 aa24.11■■□□□ 1.45
LIME1-204ENST00000476183 TREHO43280 583 aa24.1■■□□□ 1.45
LIME1-204ENST00000476183 LARGE1O95461 756 aa24.1■■□□□ 1.45
LIME1-204ENST00000476183 CTDNEP1O95476 244 aa24.1■■□□□ 1.45
LIME1-204ENST00000476183 PFKMP08237 780 aa24.1■■□□□ 1.45
LIME1-204ENST00000476183 ANKRD1Q15327 319 aa24.1■■□□□ 1.45
LIME1-204ENST00000476183 NPY5RQ15761 445 aa24.1■■□□□ 1.45
LIME1-204ENST00000476183 LRRC8DQ7L1W4 858 aa24.1■■□□□ 1.45
LIME1-204ENST00000476183 FAM161BQ96MY7 647 aa24.1■■□□□ 1.45
LIME1-204ENST00000476183 UIMC1Q96RL1 719 aa24.1■■□□□ 1.45
LIME1-204ENST00000476183 SDF4Q9BRK5 362 aa24.1■■□□□ 1.45
LIME1-204ENST00000476183 NEK4P51957 841 aa24.09■■□□□ 1.45
LIME1-204ENST00000476183 ACTR2P61160 394 aa24.09■■□□□ 1.45
LIME1-204ENST00000476183 ME3Q16798 604 aa24.09■■□□□ 1.45
LIME1-204ENST00000476183 ZNF618Q5T7W0 954 aa24.09■■□□□ 1.45
LIME1-204ENST00000476183 ZNF697Q5TEC3 545 aa24.09■■□□□ 1.45
LIME1-204ENST00000476183 TTYH1Q9H313 450 aaPredicted RBP24.09■■□□□ 1.45
LIME1-204ENST00000476183 PCDHA4Q9UN74 947 aa24.09■■□□□ 1.45
LIME1-204ENST00000476183 KAT6AQ92794 2004 aa24.09■■□□□ 1.45
LIME1-204ENST00000476183 DHX15O43143 795 aaKnown RBP24.08■■□□□ 1.45
LIME1-204ENST00000476183 NBNO60934 754 aa24.08■■□□□ 1.45
LIME1-204ENST00000476183 LGR5O75473 907 aa24.08■■□□□ 1.45
LIME1-204ENST00000476183 MARK3P27448 753 aa24.08■■□□□ 1.45
LIME1-204ENST00000476183 CIITAP33076 1130 aa24.08■■□□□ 1.45
LIME1-204ENST00000476183 PBX2P40425 430 aa24.08■■□□□ 1.45
LIME1-204ENST00000476183 ADAM17P78536 824 aa24.08■■□□□ 1.45
LIME1-204ENST00000476183 NECAB1Q8N987 351 aa24.08■■□□□ 1.45
LIME1-204ENST00000476183 LMBR1Q8WVP7 490 aa24.08■■□□□ 1.45
LIME1-204ENST00000476183 GUCD1Q96NT3 240 aa24.08■■□□□ 1.45
LIME1-204ENST00000476183 PBX4Q9BYU1 374 aa24.08■■□□□ 1.45
LIME1-204ENST00000476183 MTIF3Q9H2K0 278 aaKnown RBP24.08■■□□□ 1.45
LIME1-204ENST00000476183 EMSYQ7Z589 1322 aa24.08■■□□□ 1.44
LIME1-204ENST00000476183 CHD9Q3L8U1 2897 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 M0R2N6 131 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 DDX39AO00148 427 aaKnown RBP24.07■■□□□ 1.44
LIME1-204ENST00000476183 CDKL5O76039 1030 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 CCNE2O96020 404 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 DNAJB2P25686 324 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 MBTPS1Q14703 1052 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 GLG1Q92896 1179 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 LENG9Q96B70 501 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 FTOQ9C0B1 505 aaKnown RBP eCLIP24.07■■□□□ 1.44
LIME1-204ENST00000476183 SEMA6BQ9H3T3 888 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 SMARCAD1Q9H4L7 1026 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 ERAP1Q9NZ08 941 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 STK36Q9NRP7 1315 aa24.07■■□□□ 1.44
LIME1-204ENST00000476183 ZBBXA8MT70 800 aa24.06■■□□□ 1.44
LIME1-204ENST00000476183 ATG7O95352 703 aa24.06■■□□□ 1.44
LIME1-204ENST00000476183 CXCL10P02778 98 aa24.06■■□□□ 1.44
LIME1-204ENST00000476183 THPOP40225 353 aa24.06■■□□□ 1.44
LIME1-204ENST00000476183 BLIDQ8IZY5 108 aa24.06■■□□□ 1.44
LIME1-204ENST00000476183 DAGLBQ8NCG7 672 aa24.06■■□□□ 1.44
LIME1-204ENST00000476183 KCNJ14Q9UNX9 436 aa24.06■■□□□ 1.44
LIME1-204ENST00000476183 SLC4A7Q9Y6M7 1214 aa24.06■■□□□ 1.44
LIME1-204ENST00000476183 GBF1Q92538 1859 aa24.06■■□□□ 1.44
LIME1-204ENST00000476183 IPO5O00410 1097 aaKnown RBP24.05■■□□□ 1.44
LIME1-204ENST00000476183 GNAT1P11488 350 aa24.05■■□□□ 1.44
LIME1-204ENST00000476183 TCTN1Q2MV58 587 aa24.05■■□□□ 1.44
LIME1-204ENST00000476183 PRR16Q569H4 304 aa24.05■■□□□ 1.44
LIME1-204ENST00000476183 GTF3C6Q969F1 213 aa24.05■■□□□ 1.44
LIME1-204ENST00000476183 GJB4Q9NTQ9 266 aa24.05■■□□□ 1.44
LIME1-204ENST00000476183 NRCAMQ92823 1304 aa24.05■■□□□ 1.44
LIME1-204ENST00000476183 ACTN1P12814 892 aa24.04■■□□□ 1.44
LIME1-204ENST00000476183 FDPSP14324 419 aaKnown RBP24.04■■□□□ 1.44
LIME1-204ENST00000476183 SETQ01105 290 aaPredicted RBP24.04■■□□□ 1.44
LIME1-204ENST00000476183 PPFIA1Q13136 1202 aa24.04■■□□□ 1.44
LIME1-204ENST00000476183 FAM177A1Q8N128 213 aaPredicted RBP24.04■■□□□ 1.44
LIME1-204ENST00000476183 TBCKQ8TEA7 893 aa24.04■■□□□ 1.44
LIME1-204ENST00000476183 TIFAQ96CG3 184 aa24.04■■□□□ 1.44
LIME1-204ENST00000476183 ZNF577Q9BSK1 485 aa24.04■■□□□ 1.44
LIME1-204ENST00000476183 PHF20Q9BVI0 1012 aa24.04■■□□□ 1.44
LIME1-204ENST00000476183 IGKV6D-21A0A0A0MT36 114 aa24.03■■□□□ 1.44
LIME1-204ENST00000476183 PARNO95453 639 aaKnown RBP24.03■■□□□ 1.44
LIME1-204ENST00000476183 USP11P51784 963 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms