RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 GRM6O15303 877 aa23.62■■□□□ 1.37
VPS36-203ENST00000475375 SEMA3FQ13275 785 aa23.62■■□□□ 1.37
VPS36-203ENST00000475375 POTEBQ6S5H4 581 aa23.62■■□□□ 1.37
VPS36-203ENST00000475375 RWDD3Q9Y3V2 267 aa23.62■■□□□ 1.37
VPS36-203ENST00000475375 SUPT16HQ9Y5B9 1047 aaKnown RBP23.62■■□□□ 1.37
VPS36-203ENST00000475375 NRCAMQ92823 1304 aa23.61■■□□□ 1.37
VPS36-203ENST00000475375 WDFY4Q6ZS81 3184 aa23.61■■□□□ 1.37
VPS36-203ENST00000475375 C5orf42Q9H799 3197 aa23.61■■□□□ 1.37
VPS36-203ENST00000475375 CHRNA1P02708 482 aa23.61■■□□□ 1.37
VPS36-203ENST00000475375 RB1P06400 928 aa23.61■■□□□ 1.37
VPS36-203ENST00000475375 BMPR1AP36894 532 aa23.61■■□□□ 1.37
VPS36-203ENST00000475375 MRE11P49959 708 aa23.61■■□□□ 1.37
VPS36-203ENST00000475375 NUCB1Q02818 461 aa23.61■■□□□ 1.37
VPS36-203ENST00000475375 LMAN2LQ9H0V9 348 aa23.61■■□□□ 1.37
VPS36-203ENST00000475375 IGFLR1Q9H665 355 aa23.61■■□□□ 1.37
VPS36-203ENST00000475375 TELO2Q9Y4R8 837 aa23.61■■□□□ 1.37
VPS36-203ENST00000475375 BAZ2BQ9UIF8 2168 aaKnown RBP23.61■■□□□ 1.37
VPS36-203ENST00000475375 FRMPD4Q14CM0 1322 aa23.6■■□□□ 1.37
VPS36-203ENST00000475375 ADGRA3Q8IWK6 1321 aa23.6■■□□□ 1.37
VPS36-203ENST00000475375 C19orf67A6NJJ6 358 aa23.6■■□□□ 1.37
VPS36-203ENST00000475375 C5orf67F2Z3F1 127 aa23.6■■□□□ 1.37
VPS36-203ENST00000475375 CYTH3O43739 400 aa23.6■■□□□ 1.37
VPS36-203ENST00000475375 LTBRP36941 435 aa23.6■■□□□ 1.37
VPS36-203ENST00000475375 RUFY4Q6ZNE9 571 aa23.6■■□□□ 1.37
VPS36-203ENST00000475375 RSPH3Q86UC2 560 aa23.6■■□□□ 1.37
VPS36-203ENST00000475375 SMARCC2Q8TAQ2 1214 aa23.6■■□□□ 1.37
VPS36-203ENST00000475375 CUL5Q93034 780 aa23.6■■□□□ 1.37
VPS36-203ENST00000475375 POP1Q99575 1024 aaKnown RBP23.6■■□□□ 1.37
VPS36-203ENST00000475375 RALGAPA2Q2PPJ7 1873 aa23.6■■□□□ 1.37
VPS36-203ENST00000475375 IRS1P35568 1242 aa23.59■■□□□ 1.37
VPS36-203ENST00000475375 ADAM17P78536 824 aa23.59■■□□□ 1.37
VPS36-203ENST00000475375 NHLH1Q02575 133 aa23.59■■□□□ 1.37
VPS36-203ENST00000475375 HYAL1Q12794 435 aa23.59■■□□□ 1.37
VPS36-203ENST00000475375 BTG3Q14201 252 aaPredicted RBP23.59■■□□□ 1.37
VPS36-203ENST00000475375 WTAPQ15007 396 aa23.59■■□□□ 1.37
VPS36-203ENST00000475375 TAF2Q6P1X5 1199 aa23.59■■□□□ 1.37
VPS36-203ENST00000475375 FBXL18Q96ME1 805 aa23.59■■□□□ 1.37
VPS36-203ENST00000475375 SENP2Q9HC62 589 aa23.59■■□□□ 1.37
VPS36-203ENST00000475375 DLX2Q07687 328 aaPredicted RBP23.58■■□□□ 1.37
VPS36-203ENST00000475375 PPFIA1Q13136 1202 aa23.58■■□□□ 1.37
VPS36-203ENST00000475375 LPIN1Q14693 890 aa23.58■■□□□ 1.37
VPS36-203ENST00000475375 SART3Q15020 963 aaKnown RBP23.58■■□□□ 1.37
VPS36-203ENST00000475375 RALYLQ86SE5 291 aaKnown RBP23.58■■□□□ 1.37
VPS36-203ENST00000475375 NLRX1Q86UT6 975 aa23.58■■□□□ 1.37
VPS36-203ENST00000475375 GIMAP8Q8ND71 665 aaPredicted RBP23.58■■□□□ 1.37
VPS36-203ENST00000475375 IL25Q9H293 177 aa23.58■■□□□ 1.37
VPS36-203ENST00000475375 DOCK5Q9H7D0 1870 aa23.58■■□□□ 1.36
VPS36-203ENST00000475375 MARK3P27448 753 aa23.57■■□□□ 1.36
VPS36-203ENST00000475375 TCF7P36402 384 aaPredicted RBP23.57■■□□□ 1.36
VPS36-203ENST00000475375 SMAD2Q15796 467 aaKnown RBP23.57■■□□□ 1.36
VPS36-203ENST00000475375 CTC1Q2NKJ3 1217 aa23.57■■□□□ 1.36
VPS36-203ENST00000475375 PCNX4Q63HM2 1172 aa23.57■■□□□ 1.36
VPS36-203ENST00000475375 USP17L6PQ6QN14 398 aa23.57■■□□□ 1.36
VPS36-203ENST00000475375 HFE2Q6ZVN8 426 aa23.57■■□□□ 1.36
VPS36-203ENST00000475375 CATIPQ7Z7H3 387 aa23.57■■□□□ 1.36
VPS36-203ENST00000475375 SENP7Q9BQF6 1050 aa23.57■■□□□ 1.36
VPS36-203ENST00000475375 MUTYHQ9UIF7 546 aa23.57■■□□□ 1.36
VPS36-203ENST00000475375 U3KPZ7 1027 aaPredicted RBP23.57■■□□□ 1.36
VPS36-203ENST00000475375 ENPP3O14638 875 aa23.56■■□□□ 1.36
VPS36-203ENST00000475375 MBTPS2O43462 519 aa23.56■■□□□ 1.36
VPS36-203ENST00000475375 IGHDP01880 384 aa23.56■■□□□ 1.36
VPS36-203ENST00000475375 GTF2F1P35269 517 aaKnown RBP eCLIP23.56■■□□□ 1.36
VPS36-203ENST00000475375 TROAPQ12815 778 aa23.56■■□□□ 1.36
VPS36-203ENST00000475375 AAMPQ13685 434 aa23.56■■□□□ 1.36
VPS36-203ENST00000475375 XRRA1Q6P2D8 792 aa23.56■■□□□ 1.36
VPS36-203ENST00000475375 CLP1Q92989 425 aaKnown RBP23.56■■□□□ 1.36
VPS36-203ENST00000475375 MFSD14AQ96MC6 490 aa23.56■■□□□ 1.36
VPS36-203ENST00000475375 KCNH6Q9H252 994 aa23.56■■□□□ 1.36
VPS36-203ENST00000475375 EHMT1Q9H9B1 1298 aa23.56■■□□□ 1.36
VPS36-203ENST00000475375 ALG13Q9NP73 1137 aaKnown RBP23.56■■□□□ 1.36
VPS36-203ENST00000475375 TUBE1Q9UJT0 475 aa23.56■■□□□ 1.36
VPS36-203ENST00000475375 TRIOO75962 3097 aa23.56■■□□□ 1.36
VPS36-203ENST00000475375 LINC00271P0C7V0 271 aa23.55■■□□□ 1.36
VPS36-203ENST00000475375 SMAD4Q13485 552 aaKnown RBP23.55■■□□□ 1.36
VPS36-203ENST00000475375 GRIK4Q16099 956 aa23.55■■□□□ 1.36
VPS36-203ENST00000475375 DNAJB3Q8WWF6 145 aa23.55■■□□□ 1.36
VPS36-203ENST00000475375 GLG1Q92896 1179 aa23.55■■□□□ 1.36
VPS36-203ENST00000475375 RRP36Q96EU6 259 aaKnown RBP23.55■■□□□ 1.36
VPS36-203ENST00000475375 CD207Q9UJ71 328 aa23.55■■□□□ 1.36
VPS36-203ENST00000475375 STXBP3O00186 592 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 LINC01565O15544 149 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 TBX10O75333 385 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 MMP1P03956 469 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 CYP21A2P08686 494 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 NDUFV1P49821 464 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 IGBP1P78318 339 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 MGAT3Q09327 533 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 FBXO47Q5MNV8 452 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 TSHZ1Q6ZSZ6 1077 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 RNF135Q8IUD6 432 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 PPP2R3CQ969Q6 453 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 PLVAPQ9BX97 442 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 RC3H2Q9HBD1 1191 aaKnown RBP23.54■■□□□ 1.36
VPS36-203ENST00000475375 ERAP1Q9NZ08 941 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 PKD2L1Q9P0L9 805 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 SEC63Q9UGP8 760 aaKnown RBP23.54■■□□□ 1.36
VPS36-203ENST00000475375 CDY2AQ9Y6F7 541 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 KAT6AQ92794 2004 aa23.54■■□□□ 1.36
VPS36-203ENST00000475375 NCOA7Q8NI08 942 aa23.53■■□□□ 1.36
VPS36-203ENST00000475375 SEPT1Q8WYJ6 367 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms