RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 MFSD1Q9H3U5 465 aa16.42■□□□□ 0.22
ATG9A-220ENST00000475339 TSHZ2Q9NRE2 1034 aa16.42■□□□□ 0.22
ATG9A-220ENST00000475339 DLL3Q9NYJ7 618 aa16.42■□□□□ 0.22
ATG9A-220ENST00000475339 OTOGLQ3ZCN5 2332 aa16.41■□□□□ 0.22
ATG9A-220ENST00000475339 SORBS3O60504 671 aa16.41■□□□□ 0.22
ATG9A-220ENST00000475339 PPFIA4O75335 1185 aa16.41■□□□□ 0.22
ATG9A-220ENST00000475339 LMNAP02545 664 aaKnown RBP16.41■□□□□ 0.22
ATG9A-220ENST00000475339 ZMYM1Q5SVZ6 1142 aa16.41■□□□□ 0.22
ATG9A-220ENST00000475339 CENPQQ7L2Z9 268 aaPredicted RBP16.41■□□□□ 0.22
ATG9A-220ENST00000475339 DCAF4Q8WV16 495 aa16.41■□□□□ 0.22
ATG9A-220ENST00000475339 NEK1Q96PY6 1258 aa16.41■□□□□ 0.22
ATG9A-220ENST00000475339 TAAR1Q96RJ0 339 aa16.41■□□□□ 0.22
ATG9A-220ENST00000475339 APOL5Q9BWW9 433 aa16.41■□□□□ 0.22
ATG9A-220ENST00000475339 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
ATG9A-220ENST00000475339 S1PR5Q9H228 398 aa16.41■□□□□ 0.22
ATG9A-220ENST00000475339 GPCPD1Q9NPB8 672 aa16.41■□□□□ 0.22
ATG9A-220ENST00000475339 FRMPD2Q68DX3 1309 aaPredicted RBP16.41■□□□□ 0.22
ATG9A-220ENST00000475339 ENPP3O14638 875 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 CAND2O75155 1236 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 DGKIO75912 1065 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 HOXD8P13378 290 aaPredicted RBP16.4■□□□□ 0.22
ATG9A-220ENST00000475339 PDE4AP27815 886 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 ANGPT1Q15389 498 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 STXBP2Q15833 593 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 ST3GAL2Q16842 350 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 NAALADL2Q58DX5 795 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 TICAM2Q86XR7 235 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 MICAL1Q8TDZ2 1067 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 SEC62Q99442 399 aaKnown RBP16.4■□□□□ 0.22
ATG9A-220ENST00000475339 MRVI1Q9Y6F6 885 aa16.4■□□□□ 0.22
ATG9A-220ENST00000475339 PI15O43692 258 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 SMIM10L2AP0DMW4 78 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 SMIM10L2BP0DMW5 78 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 HOXC8P31273 242 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 PPP4R3BQ5MIZ7 849 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 CWF19L1Q69YN2 538 aaKnown RBP16.39■□□□□ 0.21
ATG9A-220ENST00000475339 IFNL3Q8IZI9 196 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 FLCNQ8NFG4 579 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 NSUN6Q8TEA1 469 aaKnown RBP16.39■□□□□ 0.21
ATG9A-220ENST00000475339 TBC1D5Q92609 795 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 CCDC136Q96JN2 1154 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 C16orf70Q9BSU1 422 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 RNPEPQ9H4A4 650 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 DIAPH3Q9NSV4 1193 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 COL20A1Q9P218 1284 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 CDH22Q9UJ99 828 aa16.39■□□□□ 0.21
ATG9A-220ENST00000475339 PKD1L2Q7Z442 2459 aa16.38■□□□□ 0.21
ATG9A-220ENST00000475339 HSDL1Q3SXM5 330 aa16.38■□□□□ 0.21
ATG9A-220ENST00000475339 MYSM1Q5VVJ2 828 aa16.38■□□□□ 0.21
ATG9A-220ENST00000475339 HINFPQ9BQA5 517 aa16.38■□□□□ 0.21
ATG9A-220ENST00000475339 HELLSQ9NRZ9 838 aa16.38■□□□□ 0.21
ATG9A-220ENST00000475339 PNMA2Q9UL42 364 aa16.38■□□□□ 0.21
ATG9A-220ENST00000475339 NR2E1Q9Y466 385 aa16.38■□□□□ 0.21
ATG9A-220ENST00000475339 TTC3P53804 2025 aa16.38■□□□□ 0.21
ATG9A-220ENST00000475339 TSPY2A6NKD2 308 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 C2CD4DB7Z1M9 353 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 HIP1O00291 1037 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 ASGR2P07307 311 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 SLC3A2P08195 630 aaKnown RBP16.37■□□□□ 0.21
ATG9A-220ENST00000475339 GHRP10912 638 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 DUSP6Q16828 381 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 USH1GQ495M9 461 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 PAN2Q504Q3 1202 aaKnown RBP16.37■□□□□ 0.21
ATG9A-220ENST00000475339 FAM26DQ5JW98 314 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 TTC22Q5TAA0 569 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 SYCE2Q6PIF2 218 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 CCDC105Q8IYK2 499 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 RGS22Q8NE09 1264 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 SYTL5Q8TDW5 730 aaPredicted RBP16.37■□□□□ 0.21
ATG9A-220ENST00000475339 SPATA33Q96N06 139 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 RMDN3Q96TC7 470 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 NAPBQ9H115 298 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 SEMA4AQ9H3S1 761 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 RALYQ9UKM9 306 aaKnown RBP16.37■□□□□ 0.21
ATG9A-220ENST00000475339 R4GN57 208 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 GPR179Q6PRD1 2367 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 WDR19Q8NEZ3 1342 aa16.37■□□□□ 0.21
ATG9A-220ENST00000475339 A0A0D9SFI3 127 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 PATL2C9JE40 543 aaKnown RBP16.36■□□□□ 0.21
ATG9A-220ENST00000475339 H3BRB1 525 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 CHRNA1P02708 482 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 TECP42680 631 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 PPARAQ07869 468 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 NMIQ13287 307 aaPredicted RBP16.36■□□□□ 0.21
ATG9A-220ENST00000475339 RSPO4Q2I0M5 234 aaPredicted RBP16.36■□□□□ 0.21
ATG9A-220ENST00000475339 MCMDC2Q4G0Z9 681 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 ANKRD54Q6NXT1 300 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 CMTR2Q8IYT2 770 aaKnown RBP16.36■□□□□ 0.21
ATG9A-220ENST00000475339 DTWD2Q8NBA8 298 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 CYP2W1Q8TAV3 490 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 FAM227BQ96M60 508 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 IWS1Q96ST2 819 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 TUT1Q9H6E5 874 aaKnown RBP16.36■□□□□ 0.21
ATG9A-220ENST00000475339 SETD4Q9NVD3 440 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 MYH7BA7E2Y1 1941 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 KIAA1217Q5T5P2 1943 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 USP24Q9UPU5 2620 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 FRYLO94915 3013 aa16.36■□□□□ 0.21
ATG9A-220ENST00000475339 EIF3JO75822 258 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms