RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 LGALS2P05162 132 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 CDC27P30260 824 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 ADD1P35611 737 aaKnown RBP13.56□□□□□ -0.24
CLIP2-204ENST00000474962 NEDD9Q14511 834 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 MBTPS1Q14703 1052 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 UBE2SQ16763 222 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 GNPTABQ3T906 1256 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 PCNX4Q63HM2 1172 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 HERC6Q8IVU3 1022 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 TRIM22Q8IYM9 498 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 PHOSPHO2Q8TCD6 241 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 GPR20Q99678 358 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 RNPEPQ9H4A4 650 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 TREHO43280 583 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 FIBPO43427 364 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 PFKFB2O60825 505 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 CXCL10P02778 98 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 SMIM10L2AP0DMW4 78 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 SMIM10L2BP0DMW5 78 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 ITGB5P18084 799 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 THPOP40225 353 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 SP4Q02446 784 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 SSRP1Q08945 709 aaKnown RBP13.55□□□□□ -0.24
CLIP2-204ENST00000474962 RBL2Q08999 1139 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 UTP14CQ5TAP6 766 aaKnown RBP13.55□□□□□ -0.24
CLIP2-204ENST00000474962 XRRA1Q6P2D8 792 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 METTL7BQ6UX53 244 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 SERINC5Q86VE9 423 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 ATP6V0A1Q93050 837 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 SLC9A7Q96T83 725 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 NCOA5Q9HCD5 579 aaKnown RBP13.55□□□□□ -0.24
CLIP2-204ENST00000474962 SH2B1Q9NRF2 756 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-204ENST00000474962 SETD4Q9NVD3 440 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 TTC28Q96AY4 2481 aa13.55□□□□□ -0.24
CLIP2-204ENST00000474962 C17orf102A2RUQ5 167 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 EPOPA6NHQ4 379 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 BAIAP3O94812 1187 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 WDR5P61964 334 aaKnown RBP13.54□□□□□ -0.24
CLIP2-204ENST00000474962 DEFB103AP81534 67 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 TAP1Q03518 808 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 FUT2Q10981 343 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 ME3Q16798 604 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 HEATR3Q7Z4Q2 680 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 SPRED2Q7Z698 418 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 TRIM50Q86XT4 487 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 SENP7Q9BQF6 1050 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 OSBPL7Q9BZF2 842 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 PCDHA6Q9UN73 950 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 PCDHA8Q9Y5H6 950 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 V9GY48 417 aaPredicted RBP13.54□□□□□ -0.24
CLIP2-204ENST00000474962 GBF1Q92538 1859 aa13.54□□□□□ -0.24
CLIP2-204ENST00000474962 LCHNA4D1U4 455 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 RSPH10B2B2RC85 870 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 KIF28PB7ZC32 967 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 TLL1O43897 1013 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 PARNO95453 639 aaKnown RBP13.53□□□□□ -0.24
CLIP2-204ENST00000474962 RSPH10BP0C881 870 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 IFNAR1P17181 557 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 HOXC8P31273 242 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 KCNJ6P48051 423 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 SCRN1Q12765 414 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 IKBKEQ14164 716 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 TYW1BQ6NUM6 668 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 CNKSR3Q6P9H4 555 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 NLRX1Q86UT6 975 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 NECAB1Q8N987 351 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 SLC26A6Q9BXS9 759 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 FAM217BQ9NTX9 383 aaPredicted RBP13.53□□□□□ -0.24
CLIP2-204ENST00000474962 PKD2L1Q9P0L9 805 aa13.53□□□□□ -0.24
CLIP2-204ENST00000474962 ABHD14A-ACY1A0A1B0GW23 586 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 GSTTP1A0A1W2PQM5 241 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 PRPF3O43395 683 aaKnown RBP13.52□□□□□ -0.25
CLIP2-204ENST00000474962 KCNA2P16389 499 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 KRT40Q6A162 431 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 WWC2Q6AWC2 1192 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 FAM117BQ6P1L5 589 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.52□□□□□ -0.25
CLIP2-204ENST00000474962 CCDC83Q8IWF9 413 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 DBF4BQ8NFT6 615 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 CYP2W1Q8TAV3 490 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 ARNTL2Q8WYA1 636 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 PHKBQ93100 1093 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 GTF3C6Q969F1 213 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 ZBED2Q9BTP6 218 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 RNF26Q9BY78 433 aaPredicted RBP13.52□□□□□ -0.25
CLIP2-204ENST00000474962 UBIAD1Q9Y5Z9 338 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 CNTNAP5Q8WYK1 1306 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 NID2Q14112 1375 aa13.52□□□□□ -0.25
CLIP2-204ENST00000474962 SPDYE3A6NKU9 549 aa13.51□□□□□ -0.25
CLIP2-204ENST00000474962 hCG_1984214I3L0E3 225 aa13.51□□□□□ -0.25
CLIP2-204ENST00000474962 PPFIA3O75145 1194 aa13.51□□□□□ -0.25
CLIP2-204ENST00000474962 LGR5O75473 907 aa13.51□□□□□ -0.25
CLIP2-204ENST00000474962 MTMR1Q13613 665 aa13.51□□□□□ -0.25
CLIP2-204ENST00000474962 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
CLIP2-204ENST00000474962 MICALL1Q8N3F8 863 aa13.51□□□□□ -0.25
CLIP2-204ENST00000474962 ZNF713Q8N859 430 aaPredicted RBP13.51□□□□□ -0.25
CLIP2-204ENST00000474962 GIMAP8Q8ND71 665 aaPredicted RBP13.51□□□□□ -0.25
CLIP2-204ENST00000474962 CCDC12Q8WUD4 166 aaPredicted RBP13.51□□□□□ -0.25
CLIP2-204ENST00000474962 WASF1Q92558 559 aa13.51□□□□□ -0.25
CLIP2-204ENST00000474962 GPRASP2Q96D09 838 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms